Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628786
Identifier: 169628786
GI number: 169628786
Start: 1722426
End: 1723493
Strand: Direct
Name: 169628786
Synonym: MAB_1696
Alternate gene names: NA
Gene position: 1722426-1723493 (Clockwise)
Preceding gene: 169628785
Following gene: 169628787
Centisome position: 33.99
GC content: 63.95
Gene sequence:
>1068_bases ATGAGAGGCACGGCGGCACGCGGCCCGCTGATCGGGCTGGCCGTCTTCCTGGTCATCGCCACGGCGCTGACCTGGCTGGT GTATGTGACCCTGCGCCGGGATGTCAAGGGTGCCACGGTGTCCTACGGAGCGATGTTCACCGATGTCTTCGGGCTGCGTG AAGGCGACGATGTGCGGATCGCAGGTGTGCGCGTCGGGAGGGTCCAGCACATCGAACTCGTCGGAACCACCGCGAAGGTG AGCTTCGCGGTCCAGGACGGTCAGCGCCTCCCCGCCAGCATCAACGCGTCGGTGACCTACCAAAACATTGTGGGCCAGCG TTATCTCGCGTTGACGCAGACGCACCCGGACCAGGGTGGTCTGCTCGCGCCAGGTGCGGTCATCCCCGTCGAGCGCACCG AGCCTTCCTTCGATATCGGCACCCTGCTCAACGGCTACGAACCACTTTTCGCGGTGCTGGATCCCGCACAGGTGAACAAC CTCACCCAGGCCGTCATCGGGTCGCTGCAGGGCGACACCGCGGCCTTCGCCACCCTAGTCGACCAGACCTCAACACTGAC AAAGACATTCACCGGGCGTGATGATGCCCTGGATCATGTCATCGCGAGCCTGGACACGGTGGTGGGCACTCTCGCCGCGC AGAACCGCGATTTCGAGGACGCCATCGGCGCGACCCGCCAGGTGGTCGATCACTTCGACAGTCGCCGTCCCGAGTTGGTG TCCTCGGTGGGAAAGATGACCGAAGTGGTCAGGAATCTGTCCCGGATCGCCCGGGACGTGGACCCCTCCGTGCACGAATT ACTCACGCGCGAACCCGGATACACCCGTCACATGCTGGATATCGAACCGCAGATCGCCTACACGGGCCTCAATACACCGC TGTTCCTCAAGGGCCTGGCACGCATGTTCGGGGAGGGCGCCTACATGAATGCCTACGCCTGCGATGTGAACCCCTACGGA TTCTTCCCGGGGCTCAATGAGGTCGTCCCGATCATCGTCGACGCGGCCACTCCGGGAAACAAGGCGAAGCACACCGCACG GTGCAGAAACGCGGGAGACGGTGGCTGA
Upstream 100 bases:
>100_bases GGCAGCCGGCCACATCGGCAGACCAACTGGTGCTGGGCCCCCTCGCCCGGGGCACCGTCGTGACACGCGCCGCAGACCCA CATGAGGAAGGAGGAGCCCG
Downstream 100 bases:
>100_bases GATGATCAGGCCGCTGGACTCATACAACAAGACTTGGCTCGGTGTCGCGGCCGTGGCCGTTGTCGCCGCGCTCATCGGTG GCCTGCTGCTGGTGAAGCAA
Product: putative Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; MCE-Family B; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Mce Family C; Mce Family B; Mce-Related Protein; Mce Family D; Mce Family Protein Mce5B; MCE-Family C; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Virulence Factor MCE-Like Protein; MCE-Family D; Mce Family Lipoe; MCE-Family
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MRGTAARGPLIGLAVFLVIATALTWLVYVTLRRDVKGATVSYGAMFTDVFGLREGDDVRIAGVRVGRVQHIELVGTTAKV SFAVQDGQRLPASINASVTYQNIVGQRYLALTQTHPDQGGLLAPGAVIPVERTEPSFDIGTLLNGYEPLFAVLDPAQVNN LTQAVIGSLQGDTAAFATLVDQTSTLTKTFTGRDDALDHVIASLDTVVGTLAAQNRDFEDAIGATRQVVDHFDSRRPELV SSVGKMTEVVRNLSRIARDVDPSVHELLTREPGYTRHMLDIEPQIAYTGLNTPLFLKGLARMFGEGAYMNAYACDVNPYG FFPGLNEVVPIIVDAATPGNKAKHTARCRNAGDGG
Sequences:
>Translated_355_residues MRGTAARGPLIGLAVFLVIATALTWLVYVTLRRDVKGATVSYGAMFTDVFGLREGDDVRIAGVRVGRVQHIELVGTTAKV SFAVQDGQRLPASINASVTYQNIVGQRYLALTQTHPDQGGLLAPGAVIPVERTEPSFDIGTLLNGYEPLFAVLDPAQVNN LTQAVIGSLQGDTAAFATLVDQTSTLTKTFTGRDDALDHVIASLDTVVGTLAAQNRDFEDAIGATRQVVDHFDSRRPELV SSVGKMTEVVRNLSRIARDVDPSVHELLTREPGYTRHMLDIEPQIAYTGLNTPLFLKGLARMFGEGAYMNAYACDVNPYG FFPGLNEVVPIIVDAATPGNKAKHTARCRNAGDGG >Mature_355_residues MRGTAARGPLIGLAVFLVIATALTWLVYVTLRRDVKGATVSYGAMFTDVFGLREGDDVRIAGVRVGRVQHIELVGTTAKV SFAVQDGQRLPASINASVTYQNIVGQRYLALTQTHPDQGGLLAPGAVIPVERTEPSFDIGTLLNGYEPLFAVLDPAQVNN LTQAVIGSLQGDTAAFATLVDQTSTLTKTFTGRDDALDHVIASLDTVVGTLAAQNRDFEDAIGATRQVVDHFDSRRPELV SSVGKMTEVVRNLSRIARDVDPSVHELLTREPGYTRHMLDIEPQIAYTGLNTPLFLKGLARMFGEGAYMNAYACDVNPYG FFPGLNEVVPIIVDAATPGNKAKHTARCRNAGDGG
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38098; Mature: 38098
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGTAARGPLIGLAVFLVIATALTWLVYVTLRRDVKGATVSYGAMFTDVFGLREGDDVRI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEE AGVRVGRVQHIELVGTTAKVSFAVQDGQRLPASINASVTYQNIVGQRYLALTQTHPDQGG EEEEECCEEEEEEEECEEEEEEEEECCCCCCCCCCCCEEHHHHHCCHHEEEEECCCCCCC LLAPGAVIPVERTEPSFDIGTLLNGYEPLFAVLDPAQVNNLTQAVIGSLQGDTAAFATLV EECCCCEEECCCCCCCCCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH DQTSTLTKTFTGRDDALDHVIASLDTVVGTLAAQNRDFEDAIGATRQVVDHFDSRRPELV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH SSVGKMTEVVRNLSRIARDVDPSVHELLTREPGYTRHMLDIEPQIAYTGLNTPLFLKGLA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEECCCCHHHHHHHH RMFGEGAYMNAYACDVNPYGFFPGLNEVVPIIVDAATPGNKAKHTARCRNAGDGG HHHCCCCEEEEEEECCCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MRGTAARGPLIGLAVFLVIATALTWLVYVTLRRDVKGATVSYGAMFTDVFGLREGDDVRI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEE AGVRVGRVQHIELVGTTAKVSFAVQDGQRLPASINASVTYQNIVGQRYLALTQTHPDQGG EEEEECCEEEEEEEECEEEEEEEEECCCCCCCCCCCCEEHHHHHCCHHEEEEECCCCCCC LLAPGAVIPVERTEPSFDIGTLLNGYEPLFAVLDPAQVNNLTQAVIGSLQGDTAAFATLV EECCCCEEECCCCCCCCCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH DQTSTLTKTFTGRDDALDHVIASLDTVVGTLAAQNRDFEDAIGATRQVVDHFDSRRPELV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH SSVGKMTEVVRNLSRIARDVDPSVHELLTREPGYTRHMLDIEPQIAYTGLNTPLFLKGLA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCEEEECCCCHHHHHHHH RMFGEGAYMNAYACDVNPYGFFPGLNEVVPIIVDAATPGNKAKHTARCRNAGDGG HHHCCCCEEEEEEECCCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA