Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628785
Identifier: 169628785
GI number: 169628785
Start: 1720921
End: 1722429
Strand: Direct
Name: 169628785
Synonym: MAB_1695
Alternate gene names: NA
Gene position: 1720921-1722429 (Clockwise)
Preceding gene: 169628784
Following gene: 169628786
Centisome position: 33.96
GC content: 67.46
Gene sequence:
>1509_bases GTGCTGAATCGCCGTGATAGCCACCACGATCTAGATGGTGCCGTGTTCTCGCGCCGTCAACTGCTGGTGCGCGGGGGCGC CGCGCTGGCTCTCGTCGCCGTCCTGACGGCGGGACTGCTGATCAAGTCGACCGGGGTGCTGGACCGATACGTGAATGTCA TCGCGGACCTGCACAACGTCGGCGATGGGCTGCCGCCGCGCTCGGACGTCAAATACCGGGGAGTGCTCGTCGGCGCCGTG GACGGGGTCACGCCGTCGGCGGGCACGCAGCCCAATCGGGTTCGGGTGCGGCTAAAACCCATGTACGCCCGATCGATTCC CGCCACCGTCACCGCGCGAGTGGTACCCAGCAATGTGTTCGCCGTCTCGGCCTTACAACTCGTCGACCATGGGCCCGGAG CGCCCATTCGCGAGGGCGGGCATATCGCCGAGGACACCCGACTGCCTACCGTGTTGTTCCAGACGACCGTCAACAAGCTG CGCCAGATCTTGACCGCGGCCGGCCGCGGCCGCGAGGACAACACCGTGGGGATTCTGGCGGCGGTCGGGGCCGCCACCAA TCATCGGCGCGCCGAACTGCTCACCAGCGCCGCGCAACTGGACCGCATGCTGGATCAGCTCAACGCCATCGTCGCGACCG ACCAGGGCCCCTCGACGGTCTCGGCGTTGGTGCAGGCCGCACACGGACTCTCGCAGACCGCACCGGATCTCGTCGATGCC CTGCATCAGGCGGTGCGCCCCATGCAAACCCTGGCCGAGAAGCGCGAGCAGCTGCGCACATTCATCGGCGCCGGGGTACA GACCACCGGCACCACGGTCCGGTCCCTGCACAATCACACCGACCAGCTCATTCAGATCACCACCGATCTGACCCCGGTAC TCGGTGTGCTGGCCGACAACGCGCAGCACTTCGTGCCGATCACCCGGCGTATCACCAGGTTTTCTGACACCTTTTTCCGG GAGGTGTGGGATCCGGAATTGGCCACTGCCAAGGGACGGGTGAACCTGTCCTTCACCCCGTCGTATACCTACACCCGGGC CGACTGCCCACGGTACGGGGAACTCAAGGGGCCCAGCTGTTTTACCGCCCCGCAGATCGCGGTGCGCCCGGACCTTCCGG AAGTACTGCTGCCACAGAACTATCAACCACCGGCCAATCTGGCGCCGCCGCCGGGAACCGTGCTCGGCGACAACGGCAAT CTCATCGCGGTGGGTCCACCGTTGGTCAACCCGAACCCTGACCTGCGTGACCCGAACCCGCCGGTGCCGCCGTGGCTCAC TCCCGCACCGCCGGTGCCGGGCAGCGCCGACCCCGGCCAGATCCTCACCGCACCGGCATCGTTCGGCGGCAACGTCGGCC CGGTCGGCAGCACCCAGGAACGCGGTCAATTGGGGCAAATCCTGGGGCAGCCGGCCACATCGGCAGACCAACTGGTGCTG GGCCCCCTCGCCCGGGGCACCGTCGTGACACGCGCCGCAGACCCACATGAGGAAGGAGGAGCCCGATGA
Upstream 100 bases:
>100_bases CACGCCATGCGCGCCAGCATCACCGCGGTGATCATCGTCAACATGCTGCTGACCATGGCGCTGTGGAGCGTCGACTCCGG TGCCAGGTTCGGGGGATGAG
Downstream 100 bases:
>100_bases GAGGCACGGCGGCACGCGGCCCGCTGATCGGGCTGGCCGTCTTCCTGGTCATCGCCACGGCGCTGACCTGGCTGGTGTAT GTGACCCTGCGCCGGGATGT
Product: putative Mce family protein
Products: NA
Alternate protein names: Secreted Protein; Virulence Factor Mce Family Protein; Mce Related Protein; MCE Family Protein; Mammalian Cell Entry Related Domain-Containing Protein; MCE-Family A; Mce Protein Mce5A; Mce-Related Protein
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MLNRRDSHHDLDGAVFSRRQLLVRGGAALALVAVLTAGLLIKSTGVLDRYVNVIADLHNVGDGLPPRSDVKYRGVLVGAV DGVTPSAGTQPNRVRVRLKPMYARSIPATVTARVVPSNVFAVSALQLVDHGPGAPIREGGHIAEDTRLPTVLFQTTVNKL RQILTAAGRGREDNTVGILAAVGAATNHRRAELLTSAAQLDRMLDQLNAIVATDQGPSTVSALVQAAHGLSQTAPDLVDA LHQAVRPMQTLAEKREQLRTFIGAGVQTTGTTVRSLHNHTDQLIQITTDLTPVLGVLADNAQHFVPITRRITRFSDTFFR EVWDPELATAKGRVNLSFTPSYTYTRADCPRYGELKGPSCFTAPQIAVRPDLPEVLLPQNYQPPANLAPPPGTVLGDNGN LIAVGPPLVNPNPDLRDPNPPVPPWLTPAPPVPGSADPGQILTAPASFGGNVGPVGSTQERGQLGQILGQPATSADQLVL GPLARGTVVTRAADPHEEGGAR
Sequences:
>Translated_502_residues MLNRRDSHHDLDGAVFSRRQLLVRGGAALALVAVLTAGLLIKSTGVLDRYVNVIADLHNVGDGLPPRSDVKYRGVLVGAV DGVTPSAGTQPNRVRVRLKPMYARSIPATVTARVVPSNVFAVSALQLVDHGPGAPIREGGHIAEDTRLPTVLFQTTVNKL RQILTAAGRGREDNTVGILAAVGAATNHRRAELLTSAAQLDRMLDQLNAIVATDQGPSTVSALVQAAHGLSQTAPDLVDA LHQAVRPMQTLAEKREQLRTFIGAGVQTTGTTVRSLHNHTDQLIQITTDLTPVLGVLADNAQHFVPITRRITRFSDTFFR EVWDPELATAKGRVNLSFTPSYTYTRADCPRYGELKGPSCFTAPQIAVRPDLPEVLLPQNYQPPANLAPPPGTVLGDNGN LIAVGPPLVNPNPDLRDPNPPVPPWLTPAPPVPGSADPGQILTAPASFGGNVGPVGSTQERGQLGQILGQPATSADQLVL GPLARGTVVTRAADPHEEGGAR >Mature_502_residues MLNRRDSHHDLDGAVFSRRQLLVRGGAALALVAVLTAGLLIKSTGVLDRYVNVIADLHNVGDGLPPRSDVKYRGVLVGAV DGVTPSAGTQPNRVRVRLKPMYARSIPATVTARVVPSNVFAVSALQLVDHGPGAPIREGGHIAEDTRLPTVLFQTTVNKL RQILTAAGRGREDNTVGILAAVGAATNHRRAELLTSAAQLDRMLDQLNAIVATDQGPSTVSALVQAAHGLSQTAPDLVDA LHQAVRPMQTLAEKREQLRTFIGAGVQTTGTTVRSLHNHTDQLIQITTDLTPVLGVLADNAQHFVPITRRITRFSDTFFR EVWDPELATAKGRVNLSFTPSYTYTRADCPRYGELKGPSCFTAPQIAVRPDLPEVLLPQNYQPPANLAPPPGTVLGDNGN LIAVGPPLVNPNPDLRDPNPPVPPWLTPAPPVPGSADPGQILTAPASFGGNVGPVGSTQERGQLGQILGQPATSADQLVL GPLARGTVVTRAADPHEEGGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53112; Mature: 53112
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRRDSHHDLDGAVFSRRQLLVRGGAALALVAVLTAGLLIKSTGVLDRYVNVIADLHNV CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH GDGLPPRSDVKYRGVLVGAVDGVTPSAGTQPNRVRVRLKPMYARSIPATVTARVVPSNVF CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECHHHCCCCCEEEEEECCCCHH AVSALQLVDHGPGAPIREGGHIAEDTRLPTVLFQTTVNKLRQILTAAGRGREDNTVGILA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AVGAATNHRRAELLTSAAQLDRMLDQLNAIVATDQGPSTVSALVQAAHGLSQTAPDLVDA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCHHHHHH LHQAVRPMQTLAEKREQLRTFIGAGVQTTGTTVRSLHNHTDQLIQITTDLTPVLGVLADN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHCC AQHFVPITRRITRFSDTFFREVWDPELATAKGRVNLSFTPSYTYTRADCPRYGELKGPSC CHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCCC FTAPQIAVRPDLPEVLLPQNYQPPANLAPPPGTVLGDNGNLIAVGPPLVNPNPDLRDPNP CCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCC PVPPWLTPAPPVPGSADPGQILTAPASFGGNVGPVGSTQERGQLGQILGQPATSADQLVL CCCCCCCCCCCCCCCCCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE GPLARGTVVTRAADPHEEGGAR CCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MLNRRDSHHDLDGAVFSRRQLLVRGGAALALVAVLTAGLLIKSTGVLDRYVNVIADLHNV CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH GDGLPPRSDVKYRGVLVGAVDGVTPSAGTQPNRVRVRLKPMYARSIPATVTARVVPSNVF CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECHHHCCCCCEEEEEECCCCHH AVSALQLVDHGPGAPIREGGHIAEDTRLPTVLFQTTVNKLRQILTAAGRGREDNTVGILA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AVGAATNHRRAELLTSAAQLDRMLDQLNAIVATDQGPSTVSALVQAAHGLSQTAPDLVDA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCHHHHHH LHQAVRPMQTLAEKREQLRTFIGAGVQTTGTTVRSLHNHTDQLIQITTDLTPVLGVLADN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHCC AQHFVPITRRITRFSDTFFREVWDPELATAKGRVNLSFTPSYTYTRADCPRYGELKGPSC CHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCCC FTAPQIAVRPDLPEVLLPQNYQPPANLAPPPGTVLGDNGNLIAVGPPLVNPNPDLRDPNP CCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCC PVPPWLTPAPPVPGSADPGQILTAPASFGGNVGPVGSTQERGQLGQILGQPATSADQLVL CCCCCCCCCCCCCCCCCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE GPLARGTVVTRAADPHEEGGAR CCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA