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The map label for this gene is rhbA [H]

Identifier: 169628774

GI number: 169628774

Start: 1710723

End: 1712045

Strand: Direct

Name: rhbA [H]

Synonym: MAB_1684

Alternate gene names: 169628774

Gene position: 1710723-1712045 (Clockwise)

Preceding gene: 169628773

Following gene: 169628775

Centisome position: 33.76

GC content: 68.25

Gene sequence:

>1323_bases
ATGACCGTCAGTCAATTCACATCCACCGCAAGAGAGTCCGCGGCCGCGACGTACTCACGACGTTTGCCGATCCGGCCCGT
CGAGGCGCGGGGCGCCCGGGTGCGTGCCGAGGACGGCCGCTGGTACGTCGACTGCCTGGCCGCGGCCGGTGCCATGTCGC
TGGGCTGGAATCACCCGGCCGTCAACGAGGCGGTCATGAAGACGGTTTCGTCCGGTGAGCCGCTGTTGTCACTGGACTTT
CACACCCCGTCCCGCGACCGGTTCGTCGAGGAGCTGCTGTCCATCCTGCCGGTCAGGCTTGCCACGGACGCCAGCATCCA
TCTGTGCTCGCCCAGCGGAGCCAGTGCGGTGGAGGCAGCGTTGATGCTCGCCGAGATCGCCACCGGTGGCCGCGAACACA
TTGGTGTGCAAGGTGGTTTTCATGGATGCACCCGAGCAGCGCGTGCCGCCAGTTCCGGGGGCGGGCTGCGCAGGCAGCCG
GTGGTGCTCTCCCCACAGGCGAGCTTCCTGCCGTACCCACAGGAGTACCGCAGCCCTTTCGGGGTGAGCGGTGAACGCGG
CGTCGAGTTGGCGATCGCAGCGGCCGAGGCGGTTGCCCGCCCACACAGCGGCGTCACCGCACCGGCCTCATTGATCGCCG
AGTTCGTTCTGGGCGAGGGCGGCGTGATACCGGCGCCCGCGCGGTGGGGCCAGGCGCTGCGCCGCACGGCGTCGACGCTG
GGAGTGCCTCTCATTGCCGACGAGGTACAGGCGGGCATGTACCGCACCGGCCCGGCATGGGCATTCCAGCACAGCGGTAT
CGAACCCGACATGATGGTGATCTCCAAGGGACTCGGGTCTGGTATCCCCATCGCAGTCCTGGTGGTCCGCAAGGAATTCG
ACGTCTGGGAACCCGGTGCGTTCACCGGAACCTTCCGTGGGAACGCCATGGCCTTCGCCGCCGCGAGCGCCGTGATCCGC
TTTGCGCGGGAGAACGGGCTGCGCGGGCAGGTGACCGCCCGCGGCAAGATCTTCCTCGATGGCCTGAACGCGGTCGCATC
CGATTCGGCGCTGGTGGGTGACGTGCGCGGAGTCGGGCTCATGCTGGGTGTGGAGATCGTGGACCCCGACATGCCATGGC
CGGATGACGCCGGAGCGCCCGCGCCCGAACTTGCCGCCCGCATTCAGCAGGCTTGCCTGCAGCACGGACTGATCGTCGAA
ACCGGCGGCCAGTACGGCAACGTGGTGCGGTTCCTGCCGCCACTGACGATCGACGAGCCGGATATCGCCGCTGCGCTCAA
CGCGTTTGACGCCGCACTCAGTGCGGTGGAGCGCACGCGGTGA

Upstream 100 bases:

>100_bases
TGGCGGCGATCCCGCCCGATGCCGGGTACCGGGCCACCGAAGACCGTTCACTCGCCTCATCGCTGCGGCGGCTGCTCGCC
CACCCGCGAAAGGAGGCGGT

Downstream 100 bases:

>100_bases
CGGCCCATCAGAGTCCCTTCGTGCAGAGTCCCTTCGTGAGCGACTTTCTCACGGGCGACAGCGCGCACACGTACCGCGAG
GCCGTCGCGCTGGCGGCCGA

Product: diaminobutyrate--2-oxoglutarate aminotransferase

Products: NA

Alternate protein names: Diaminobutyrate transaminase; L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase; DABA aminotransferase; DABA-AT; L-diaminobutyric acid transaminase [H]

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MTVSQFTSTARESAAATYSRRLPIRPVEARGARVRAEDGRWYVDCLAAAGAMSLGWNHPAVNEAVMKTVSSGEPLLSLDF
HTPSRDRFVEELLSILPVRLATDASIHLCSPSGASAVEAALMLAEIATGGREHIGVQGGFHGCTRAARAASSGGGLRRQP
VVLSPQASFLPYPQEYRSPFGVSGERGVELAIAAAEAVARPHSGVTAPASLIAEFVLGEGGVIPAPARWGQALRRTASTL
GVPLIADEVQAGMYRTGPAWAFQHSGIEPDMMVISKGLGSGIPIAVLVVRKEFDVWEPGAFTGTFRGNAMAFAAASAVIR
FARENGLRGQVTARGKIFLDGLNAVASDSALVGDVRGVGLMLGVEIVDPDMPWPDDAGAPAPELAARIQQACLQHGLIVE
TGGQYGNVVRFLPPLTIDEPDIAAALNAFDAALSAVERTR

Sequences:

>Translated_440_residues
MTVSQFTSTARESAAATYSRRLPIRPVEARGARVRAEDGRWYVDCLAAAGAMSLGWNHPAVNEAVMKTVSSGEPLLSLDF
HTPSRDRFVEELLSILPVRLATDASIHLCSPSGASAVEAALMLAEIATGGREHIGVQGGFHGCTRAARAASSGGGLRRQP
VVLSPQASFLPYPQEYRSPFGVSGERGVELAIAAAEAVARPHSGVTAPASLIAEFVLGEGGVIPAPARWGQALRRTASTL
GVPLIADEVQAGMYRTGPAWAFQHSGIEPDMMVISKGLGSGIPIAVLVVRKEFDVWEPGAFTGTFRGNAMAFAAASAVIR
FARENGLRGQVTARGKIFLDGLNAVASDSALVGDVRGVGLMLGVEIVDPDMPWPDDAGAPAPELAARIQQACLQHGLIVE
TGGQYGNVVRFLPPLTIDEPDIAAALNAFDAALSAVERTR
>Mature_439_residues
TVSQFTSTARESAAATYSRRLPIRPVEARGARVRAEDGRWYVDCLAAAGAMSLGWNHPAVNEAVMKTVSSGEPLLSLDFH
TPSRDRFVEELLSILPVRLATDASIHLCSPSGASAVEAALMLAEIATGGREHIGVQGGFHGCTRAARAASSGGGLRRQPV
VLSPQASFLPYPQEYRSPFGVSGERGVELAIAAAEAVARPHSGVTAPASLIAEFVLGEGGVIPAPARWGQALRRTASTLG
VPLIADEVQAGMYRTGPAWAFQHSGIEPDMMVISKGLGSGIPIAVLVVRKEFDVWEPGAFTGTFRGNAMAFAAASAVIRF
ARENGLRGQVTARGKIFLDGLNAVASDSALVGDVRGVGLMLGVEIVDPDMPWPDDAGAPAPELAARIQQACLQHGLIVET
GGQYGNVVRFLPPLTIDEPDIAAALNAFDAALSAVERTR

Specific function: Unknown

COG id: COG0160

COG function: function code E; 4-aminobutyrate aminotransferase and related aminotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI13994255, Length=419, Percent_Identity=26.9689737470167, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI37574042, Length=436, Percent_Identity=27.5229357798165, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI226442705, Length=435, Percent_Identity=26.2068965517241, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI226442709, Length=405, Percent_Identity=27.1604938271605, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI24119277, Length=434, Percent_Identity=26.7281105990783, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI4557809, Length=427, Percent_Identity=23.4192037470726, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI284507298, Length=230, Percent_Identity=26.9565217391304, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI1787560, Length=410, Percent_Identity=30.9756097560976, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1789016, Length=420, Percent_Identity=30.7142857142857, Blast_Score=148, Evalue=8e-37,
Organism=Escherichia coli, GI145693181, Length=408, Percent_Identity=29.4117647058824, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1788044, Length=426, Percent_Identity=30.0469483568075, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1789759, Length=424, Percent_Identity=28.5377358490566, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1786349, Length=353, Percent_Identity=27.1954674220963, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786991, Length=412, Percent_Identity=26.4563106796117, Blast_Score=82, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI32564660, Length=414, Percent_Identity=29.2270531400966, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI71992977, Length=423, Percent_Identity=25.7683215130024, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25144271, Length=439, Percent_Identity=25.0569476082005, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25144274, Length=222, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324432, Length=432, Percent_Identity=27.3148148148148, Blast_Score=120, Evalue=6e-28,
Organism=Saccharomyces cerevisiae, GI6323470, Length=444, Percent_Identity=26.5765765765766, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21356575, Length=442, Percent_Identity=27.3755656108597, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI161085790, Length=420, Percent_Identity=26.1904761904762, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI28574759, Length=420, Percent_Identity=26.1904761904762, Blast_Score=128, Evalue=6e-30,
Organism=Drosophila melanogaster, GI21357415, Length=429, Percent_Identity=24.009324009324, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281366494, Length=441, Percent_Identity=22.4489795918367, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24667139, Length=441, Percent_Identity=22.4489795918367, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24667143, Length=441, Percent_Identity=22.4489795918367, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR004637
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.76 [H]

Molecular weight: Translated: 46103; Mature: 45972

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSQFTSTARESAAATYSRRLPIRPVEARGARVRAEDGRWYVDCLAAAGAMSLGWNHPA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEHHHHHHCHHHCCCCCCH
VNEAVMKTVSSGEPLLSLDFHTPSRDRFVEELLSILPVRLATDASIHLCSPSGASAVEAA
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHEECCCEEEEECCCCCHHHHHH
LMLAEIATGGREHIGVQGGFHGCTRAARAASSGGGLRRQPVVLSPQASFLPYPQEYRSPF
HHHHHHHCCCHHEECCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHCCCC
GVSGERGVELAIAAAEAVARPHSGVTAPASLIAEFVLGEGGVIPAPARWGQALRRTASTL
CCCCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
GVPLIADEVQAGMYRTGPAWAFQHSGIEPDMMVISKGLGSGIPIAVLVVRKEFDVWEPGA
CCCHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
FTGTFRGNAMAFAAASAVIRFARENGLRGQVTARGKIFLDGLNAVASDSALVGDVRGVGL
EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHCCCHHEHHHCCCEE
MLGVEIVDPDMPWPDDAGAPAPELAARIQQACLQHGLIVETGGQYGNVVRFLPPLTIDEP
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCCCCC
DIAAALNAFDAALSAVERTR
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVSQFTSTARESAAATYSRRLPIRPVEARGARVRAEDGRWYVDCLAAAGAMSLGWNHPA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEHHHHHHCHHHCCCCCCH
VNEAVMKTVSSGEPLLSLDFHTPSRDRFVEELLSILPVRLATDASIHLCSPSGASAVEAA
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHEECCCEEEEECCCCCHHHHHH
LMLAEIATGGREHIGVQGGFHGCTRAARAASSGGGLRRQPVVLSPQASFLPYPQEYRSPF
HHHHHHHCCCHHEECCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHCCCC
GVSGERGVELAIAAAEAVARPHSGVTAPASLIAEFVLGEGGVIPAPARWGQALRRTASTL
CCCCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
GVPLIADEVQAGMYRTGPAWAFQHSGIEPDMMVISKGLGSGIPIAVLVVRKEFDVWEPGA
CCCHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
FTGTFRGNAMAFAAASAVIRFARENGLRGQVTARGKIFLDGLNAVASDSALVGDVRGVGL
EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHCCCHHEHHHCCCEE
MLGVEIVDPDMPWPDDAGAPAPELAARIQQACLQHGLIVETGGQYGNVVRFLPPLTIDEP
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCCCCC
DIAAALNAFDAALSAVERTR
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]