Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is yghO [H]
Identifier: 169628771
GI number: 169628771
Start: 1707462
End: 1708658
Strand: Direct
Name: yghO [H]
Synonym: MAB_1681
Alternate gene names: 169628771
Gene position: 1707462-1708658 (Clockwise)
Preceding gene: 169628770
Following gene: 169628772
Centisome position: 33.7
GC content: 64.91
Gene sequence:
>1197_bases ATGACTTGGGAATTGTCCGTGCTGGATAGGGGATTGATCGAGTCACCGACCCGGCAGCGACAGAGGCGCTCGCCGGTATC GGTGCGTCGCGTCGAATCTCACCGGGATGCCAAGCAATTCATCGCTATGCCATGGCATATCTACGGCGACGACCCCCGGT GGCGCCCTACCCTGCGCCGTGTCATGCAGGCGAAGATGAACTCCAAGCACAACCCCCTGCACGGGGAGGTGCAGGTCGAA AACTTCGTTGCCTACCGTGGCGGTAGCCCTGTCGGACGTATCTCCGCCGCGATCGACTCGGCCTATGTGCAGCGCTACGG CGAGTGCGCGTTCTTCGGGTTCTTCGAAAGCGAGGACGACGAGTCGATAGCGGGCGCGCTGCTGGGGGAGGCCGAGCGCT GGGCGGCGCGCCGGGGCGTCACCAAAATGGTCGGTCCGTTCAGCTACACCTCCCGCGAGGAAGTCGGGCTGCTGGTCTCC GGCTATGACAGGCCGCCGGCACTCATGCAGCCCTACAACCCGCGGTACTACCCGGCGCTGGTGGAGGCATCCGGATACCG CAAGAAGTTCGACACCGCCTCGTACCGTTGGCATCTGGACGGCAGCCAAGATGTTCGGCAACGCCTGGTGCGACGGGCCG ACGCGGTGATGCGCGACCAGGCAGTGACGGTGCGCTCGGTGCGCATGCGCCACTACACCGAGGAATTAGAGCTGCTGCGC GGTCTTTACAACGACTCGTTCGCTCACCATCCCGAGAACGTTCCCCTCAGCCGCGAGGTGTTCTCGGGGATGGCCGCCGA GATGCGGCCGTTGATCGATCCGAACATCGTCCGGATAGTGGAATCCGAGGGCACTCCGGTCGGATTCCTACTGATGCTGC CGGATGTCAACGAGATCGCCGGACGGTCCGGTCGGCTCACCCCGGCCCTGCTGGCCCGGCTGGCGGCGCGCCGCGACGGG CGCATCCGCGGGATCGATACCGCCGTCGTGGTGCTCATCGGCGCGGTGCAGACCCAGTTCGGGGCGGGCATCGGCAGAGT TCTGGCGGGCGAGATCGTCCGGACGATCACCGGCAGCGGCTATTCCTCGGTCGCCACCACCTGGGTGCATGAGGACAATG TGTGGTCGAATTCGCTTACCGCCCAGATGAAGACGGACCCCGAAAAGATCCATCGGGTCTACCAGAAGGCACTGTGA
Upstream 100 bases:
>100_bases CTCGATACGGTCATCTTCGCGGTACCACTGACGTTCGTGTTGCACCACTTCTACATGGACGGCGCGCTGTGGAAGAGCAA GGGCAATCCGGAGCTGGCGC
Downstream 100 bases:
>100_bases TGAGCGGCCGGACATTGGTCACCGGTGCCACGGGGTACCTGGGGTCAACCCTGGTGGCTTCCCTGGTGCAGGCCGGTGAG CGCGTCACCGTCCTGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTWELSVLDRGLIESPTRQRQRRSPVSVRRVESHRDAKQFIAMPWHIYGDDPRWRPTLRRVMQAKMNSKHNPLHGEVQVE NFVAYRGGSPVGRISAAIDSAYVQRYGECAFFGFFESEDDESIAGALLGEAERWAARRGVTKMVGPFSYTSREEVGLLVS GYDRPPALMQPYNPRYYPALVEASGYRKKFDTASYRWHLDGSQDVRQRLVRRADAVMRDQAVTVRSVRMRHYTEELELLR GLYNDSFAHHPENVPLSREVFSGMAAEMRPLIDPNIVRIVESEGTPVGFLLMLPDVNEIAGRSGRLTPALLARLAARRDG RIRGIDTAVVVLIGAVQTQFGAGIGRVLAGEIVRTITGSGYSSVATTWVHEDNVWSNSLTAQMKTDPEKIHRVYQKAL
Sequences:
>Translated_398_residues MTWELSVLDRGLIESPTRQRQRRSPVSVRRVESHRDAKQFIAMPWHIYGDDPRWRPTLRRVMQAKMNSKHNPLHGEVQVE NFVAYRGGSPVGRISAAIDSAYVQRYGECAFFGFFESEDDESIAGALLGEAERWAARRGVTKMVGPFSYTSREEVGLLVS GYDRPPALMQPYNPRYYPALVEASGYRKKFDTASYRWHLDGSQDVRQRLVRRADAVMRDQAVTVRSVRMRHYTEELELLR GLYNDSFAHHPENVPLSREVFSGMAAEMRPLIDPNIVRIVESEGTPVGFLLMLPDVNEIAGRSGRLTPALLARLAARRDG RIRGIDTAVVVLIGAVQTQFGAGIGRVLAGEIVRTITGSGYSSVATTWVHEDNVWSNSLTAQMKTDPEKIHRVYQKAL >Mature_397_residues TWELSVLDRGLIESPTRQRQRRSPVSVRRVESHRDAKQFIAMPWHIYGDDPRWRPTLRRVMQAKMNSKHNPLHGEVQVEN FVAYRGGSPVGRISAAIDSAYVQRYGECAFFGFFESEDDESIAGALLGEAERWAARRGVTKMVGPFSYTSREEVGLLVSG YDRPPALMQPYNPRYYPALVEASGYRKKFDTASYRWHLDGSQDVRQRLVRRADAVMRDQAVTVRSVRMRHYTEELELLRG LYNDSFAHHPENVPLSREVFSGMAAEMRPLIDPNIVRIVESEGTPVGFLLMLPDVNEIAGRSGRLTPALLARLAARRDGR IRGIDTAVVVLIGAVQTQFGAGIGRVLAGEIVRTITGSGYSSVATTWVHEDNVWSNSLTAQMKTDPEKIHRVYQKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44901; Mature: 44769
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWELSVLDRGLIESPTRQRQRRSPVSVRRVESHRDAKQFIAMPWHIYGDDPRWRPTLRR CCEEHHHHHCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH VMQAKMNSKHNPLHGEVQVENFVAYRGGSPVGRISAAIDSAYVQRYGECAFFGFFESEDD HHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCC ESIAGALLGEAERWAARRGVTKMVGPFSYTSREEVGLLVSGYDRPPALMQPYNPRYYPAL HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHCEEEEECCCCCCCCCCCCCCCCCCEE VEASGYRKKFDTASYRWHLDGSQDVRQRLVRRADAVMRDQAVTVRSVRMRHYTEELELLR ECCCCCCHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYNDSFAHHPENVPLSREVFSGMAAEMRPLIDPNIVRIVESEGTPVGFLLMLPDVNEIA HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHC GRSGRLTPALLARLAARRDGRIRGIDTAVVVLIGAVQTQFGAGIGRVLAGEIVRTITGSG CCCCCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC YSSVATTWVHEDNVWSNSLTAQMKTDPEKIHRVYQKAL CHHHHEEEEECCCCCCCCCEEEECCCHHHHHHHHHHCC >Mature Secondary Structure TWELSVLDRGLIESPTRQRQRRSPVSVRRVESHRDAKQFIAMPWHIYGDDPRWRPTLRR CEEHHHHHCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH VMQAKMNSKHNPLHGEVQVENFVAYRGGSPVGRISAAIDSAYVQRYGECAFFGFFESEDD HHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCC ESIAGALLGEAERWAARRGVTKMVGPFSYTSREEVGLLVSGYDRPPALMQPYNPRYYPAL HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHCEEEEECCCCCCCCCCCCCCCCCCEE VEASGYRKKFDTASYRWHLDGSQDVRQRLVRRADAVMRDQAVTVRSVRMRHYTEELELLR ECCCCCCHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYNDSFAHHPENVPLSREVFSGMAAEMRPLIDPNIVRIVESEGTPVGFLLMLPDVNEIA HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHC GRSGRLTPALLARLAARRDGRIRGIDTAVVVLIGAVQTQFGAGIGRVLAGEIVRTITGSG CCCCCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC YSSVATTWVHEDNVWSNSLTAQMKTDPEKIHRVYQKAL CHHHHEEEEECCCCCCCCCEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]