Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628770
Identifier: 169628770
GI number: 169628770
Start: 1706408
End: 1707490
Strand: Direct
Name: 169628770
Synonym: MAB_1680
Alternate gene names: NA
Gene position: 1706408-1707490 (Clockwise)
Preceding gene: 169628767
Following gene: 169628771
Centisome position: 33.68
GC content: 62.23
Gene sequence:
>1083_bases ATGGCCACCTTTGCTACCGACACCAATGAGCTGAAGAACATCGATGGCGAAAGTCGGCCGGGCTGGTTTGTCAGCAGACG CGTCGACATCCTCTTCGTGTTCGGGTTGGGCGCGCTGCTCTCGGCGGTGCTCTTCGCGGCCGACGGGCATAAGGGCGTGT TCCTGGTGGGGGCGGTGGCCTTCTCGCTGCTGTCCGACCTGCCGCATGTGCTGACGACCACCGCCCGGGTGTGGATGGAT CCCCGCGAGCGATCGCGGTACTGGTCGCATTACGTGATCAGCTTCATCGTGGTCGGCGCGATCGTCGGCACGCTGTGGTT CGGCGGCTGGTTGGTGCCGCTGCTGGCCATCTGGGCCTACTGGCAGGTCTTCCACGTTCTCAAACAGCACTTCGGCATCA TCAACATCTACGCAGCGAAGAACGGCTACAAGGGTCCGCGAAACCGGATCAAGTACGCCTTGTATGGCGTCTGCCTGGCT CCGGTGCTGTTCCGGGCCAGCCACGGGCTCAATTTCTCCGAGTACGAGGTCTTCGGTCACCGGCTGCCGTTCTCGAACCT GAGCGTCCCGGTGCCGCCCATTCCCGGCTTCTTGGTCATCGGTGGGTTCGTTTGTGCCGCAGTCCTGTTGGGTGCCGCGC TGTGGGAGCAGGTGCAACTCAAGCGGGCCGGACAACGGACCCTGCCGGCCATGGCCGTCGCCACCTTTGTGATCGCGGCA CTGTCCTACAACCTGTCCTACCTGCTGGTTTCGGATCTGTTCGCACTGATCCTGATCGCCACGACCACCCATAGCCTGCA GTACCACCTGATCAATTGGACGCGGAACAACACGCGCTTCGCACGCACCCAGGACCCGGGCGAGAAGAAGCTGCTGTTGG CGCGGCTGTCGACGCGTAAGGCACTGCCGCTGTATATCGGCTTCTTTGCGGGATTGGGCATCCTGGCCGGACAGCTCGAT ACGGTCATCTTCGCGGTACCACTGACGTTCGTGTTGCACCACTTCTACATGGACGGCGCGCTGTGGAAGAGCAAGGGCAA TCCGGAGCTGGCGCATGACTTGGGAATTGTCCGTGCTGGATAG
Upstream 100 bases:
>100_bases CGCAGGCTCCGGCGTTGACACCGGGCACCGGGATCTCTACGTTATGAAAACGATAATCATTATCAATTAAGACTCTGACG CCTACCCGAGGATGATCGTG
Downstream 100 bases:
>100_bases GGGATTGATCGAGTCACCGACCCGGCAGCGACAGAGGCGCTCGCCGGTATCGGTGCGTCGCGTCGAATCTCACCGGGATG CCAAGCAATTCATCGCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MATFATDTNELKNIDGESRPGWFVSRRVDILFVFGLGALLSAVLFAADGHKGVFLVGAVAFSLLSDLPHVLTTTARVWMD PRERSRYWSHYVISFIVVGAIVGTLWFGGWLVPLLAIWAYWQVFHVLKQHFGIINIYAAKNGYKGPRNRIKYALYGVCLA PVLFRASHGLNFSEYEVFGHRLPFSNLSVPVPPIPGFLVIGGFVCAAVLLGAALWEQVQLKRAGQRTLPAMAVATFVIAA LSYNLSYLLVSDLFALILIATTTHSLQYHLINWTRNNTRFARTQDPGEKKLLLARLSTRKALPLYIGFFAGLGILAGQLD TVIFAVPLTFVLHHFYMDGALWKSKGNPELAHDLGIVRAG
Sequences:
>Translated_360_residues MATFATDTNELKNIDGESRPGWFVSRRVDILFVFGLGALLSAVLFAADGHKGVFLVGAVAFSLLSDLPHVLTTTARVWMD PRERSRYWSHYVISFIVVGAIVGTLWFGGWLVPLLAIWAYWQVFHVLKQHFGIINIYAAKNGYKGPRNRIKYALYGVCLA PVLFRASHGLNFSEYEVFGHRLPFSNLSVPVPPIPGFLVIGGFVCAAVLLGAALWEQVQLKRAGQRTLPAMAVATFVIAA LSYNLSYLLVSDLFALILIATTTHSLQYHLINWTRNNTRFARTQDPGEKKLLLARLSTRKALPLYIGFFAGLGILAGQLD TVIFAVPLTFVLHHFYMDGALWKSKGNPELAHDLGIVRAG >Mature_359_residues ATFATDTNELKNIDGESRPGWFVSRRVDILFVFGLGALLSAVLFAADGHKGVFLVGAVAFSLLSDLPHVLTTTARVWMDP RERSRYWSHYVISFIVVGAIVGTLWFGGWLVPLLAIWAYWQVFHVLKQHFGIINIYAAKNGYKGPRNRIKYALYGVCLAP VLFRASHGLNFSEYEVFGHRLPFSNLSVPVPPIPGFLVIGGFVCAAVLLGAALWEQVQLKRAGQRTLPAMAVATFVIAAL SYNLSYLLVSDLFALILIATTTHSLQYHLINWTRNNTRFARTQDPGEKKLLLARLSTRKALPLYIGFFAGLGILAGQLDT VIFAVPLTFVLHHFYMDGALWKSKGNPELAHDLGIVRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39874; Mature: 39743
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFATDTNELKNIDGESRPGWFVSRRVDILFVFGLGALLSAVLFAADGHKGVFLVGAVA CCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FSLLSDLPHVLTTTARVWMDPRERSRYWSHYVISFIVVGAIVGTLWFGGWLVPLLAIWAY HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQVFHVLKQHFGIINIYAAKNGYKGPRNRIKYALYGVCLAPVLFRASHGLNFSEYEVFGH HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC RLPFSNLSVPVPPIPGFLVIGGFVCAAVLLGAALWEQVQLKRAGQRTLPAMAVATFVIAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LSYNLSYLLVSDLFALILIATTTHSLQYHLINWTRNNTRFARTQDPGEKKLLLARLSTRK HHHCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHCCC ALPLYIGFFAGLGILAGQLDTVIFAVPLTFVLHHFYMDGALWKSKGNPELAHDLGIVRAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHCCCEECC >Mature Secondary Structure ATFATDTNELKNIDGESRPGWFVSRRVDILFVFGLGALLSAVLFAADGHKGVFLVGAVA CCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FSLLSDLPHVLTTTARVWMDPRERSRYWSHYVISFIVVGAIVGTLWFGGWLVPLLAIWAY HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQVFHVLKQHFGIINIYAAKNGYKGPRNRIKYALYGVCLAPVLFRASHGLNFSEYEVFGH HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC RLPFSNLSVPVPPIPGFLVIGGFVCAAVLLGAALWEQVQLKRAGQRTLPAMAVATFVIAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LSYNLSYLLVSDLFALILIATTTHSLQYHLINWTRNNTRFARTQDPGEKKLLLARLSTRK HHHCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHCCC ALPLYIGFFAGLGILAGQLDTVIFAVPLTFVLHHFYMDGALWKSKGNPELAHDLGIVRAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA