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The map label for this gene is recO

Identifier: 169628765

GI number: 169628765

Start: 1703039

End: 1703824

Strand: Direct

Name: recO

Synonym: MAB_1675

Alternate gene names: 169628765

Gene position: 1703039-1703824 (Clockwise)

Preceding gene: 169628763

Following gene: 169628766

Centisome position: 33.61

GC content: 67.3

Gene sequence:

>786_bases
ATGCGGCTTTATCGGGATCGTGCTGTCGTGCTGCGGCAGCACAAGCTCGGCGAGGCCGATCGCATCGTGACCCTGCTGAC
CCGTCAACACGGGCTGGTGCGCGCGGTAGCCAAGGGGGTGCGCCGCACGCGCAGTAAGTTCGGCTCGCGGCTGGAACCCT
TCGCGCATATCGACGTGCAACTGCATCCGGGGCGCAATCTGGACATCGTCACCCAGGTGCAGGCCATCGACGCCTTCGCC
GCGGACATTGTCAGTGACTACGGCCGGTACACCACCGCTTGCGCCATCCTGGAAACCGCCGAGCGGATCGCCGGTGAGGA
GCGGGCCCCGGCCGTTGCCCTGCACCGCCTCACCGTTGGTGCGCTGCGGGCCATCGCCGATCAACAGCGCTCCCGCGAGC
TTATTCTCGACGCATACCTCTTGCGCGCCATGAGCATTGCCGGATGGGCACCCGCCATCGGCGAATGTGCGCGGTGCGCC
ACCCCGGGCCCGCACCGCGCCTTCCATGTGGCCGCGGGCGGCAGCGTGTGTGTGCACTGTCGTCCCGCGGGTGCGGTGAC
CCCGCCGCAGGGTGTGCTGGAGTTGATGGCGGCCCTGCATGACGGCGACTGGGCGGCCACCGATGACGTGCCGCAGACCC
AGCGCACCCAGGCCAGCGGATTGATCGCGGCGCATTTGCAGTGGCATCTGGAACGCAAGCTACGGACACTCCCGCTCGTC
GAACGTGGCAGCAGGTTAAATATGAGCCATGGTGAAGAGCAGCCAGCCCGATCCGCAGCAGGATAA

Upstream 100 bases:

>100_bases
GGAAGTCAGCGTGGGAAAGCCCGACATGACCAGAAGGGTAAGCGGTCGAAATAGTGCGTCAATGCGGGGATTCGTCGGTA
CCAGATGGGAAACTATCCGA

Downstream 100 bases:

>100_bases
GTACTACACCGACTGGGCCGACGTCCCGCAGGGCTATAACCCGACGTTCCCGGATAAGACGGTGTTTCCTGCTGTTTTCC
CCAAGCTGCTGCCCGGCGTG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQLHPGRNLDIVTQVQAIDAFA
ADIVSDYGRYTTACAILETAERIAGEERAPAVALHRLTVGALRAIADQQRSRELILDAYLLRAMSIAGWAPAIGECARCA
TPGPHRAFHVAAGGSVCVHCRPAGAVTPPQGVLELMAALHDGDWAATDDVPQTQRTQASGLIAAHLQWHLERKLRTLPLV
ERGSRLNMSHGEEQPARSAAG

Sequences:

>Translated_261_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQLHPGRNLDIVTQVQAIDAFA
ADIVSDYGRYTTACAILETAERIAGEERAPAVALHRLTVGALRAIADQQRSRELILDAYLLRAMSIAGWAPAIGECARCA
TPGPHRAFHVAAGGSVCVHCRPAGAVTPPQGVLELMAALHDGDWAATDDVPQTQRTQASGLIAAHLQWHLERKLRTLPLV
ERGSRLNMSHGEEQPARSAAG
>Mature_261_residues
MRLYRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQLHPGRNLDIVTQVQAIDAFA
ADIVSDYGRYTTACAILETAERIAGEERAPAVALHRLTVGALRAIADQQRSRELILDAYLLRAMSIAGWAPAIGECARCA
TPGPHRAFHVAAGGSVCVHCRPAGAVTPPQGVLELMAALHDGDWAATDDVPQTQRTQASGLIAAHLQWHLERKLRTLPLV
ERGSRLNMSHGEEQPARSAAG

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_MYCA9 (B1MN48)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001702414.1
- ProteinModelPortal:   B1MN48
- SMR:   B1MN48
- EnsemblBacteria:   EBMYCT00000004537
- GeneID:   5964192
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_1675
- GeneTree:   EBGT00050000016913
- HOGENOM:   HBG634481
- OMA:   WHLERGL
- ProtClustDB:   PRK00085
- BioCyc:   MABS561007:MAB_1675-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28419; Mature: 28419

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQ
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
LHPGRNLDIVTQVQAIDAFAADIVSDYGRYTTACAILETAERIAGEERAPAVALHRLTVG
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ALRAIADQQRSRELILDAYLLRAMSIAGWAPAIGECARCATPGPHRAFHVAAGGSVCVHC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEE
RPAGAVTPPQGVLELMAALHDGDWAATDDVPQTQRTQASGLIAAHLQWHLERKLRTLPLV
ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ERGSRLNMSHGEEQPARSAAG
HCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLYRDRAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTRSKFGSRLEPFAHIDVQ
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
LHPGRNLDIVTQVQAIDAFAADIVSDYGRYTTACAILETAERIAGEERAPAVALHRLTVG
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ALRAIADQQRSRELILDAYLLRAMSIAGWAPAIGECARCATPGPHRAFHVAAGGSVCVHC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEE
RPAGAVTPPQGVLELMAALHDGDWAATDDVPQTQRTQASGLIAAHLQWHLERKLRTLPLV
ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ERGSRLNMSHGEEQPARSAAG
HCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA