Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628763
Identifier: 169628763
GI number: 169628763
Start: 1700613
End: 1701461
Strand: Direct
Name: 169628763
Synonym: MAB_1673
Alternate gene names: NA
Gene position: 1700613-1701461 (Clockwise)
Preceding gene: 169628762
Following gene: 169628765
Centisome position: 33.56
GC content: 63.84
Gene sequence:
>849_bases ATGGGTGGGCTCATTGTGGCGAGCGAGGCGTTGGCCTCGGGCGATGTCACTCGACAAGAATTGCGCAAGTACTATGTGAA GGTCTTCCACAACGTGCATCTGCGGCGGGGTGTCGAACTGACGGCTGCGTTGCGCGCCGAGGCTGCGTTTCTGTGGTCCG GGCGTAAGGCTGTTGTATCGGGGGTATCTGCAGCGGCGTTGCACGGTAATCAGTGGATCTCGGCCGAGCGGCCCGCGGAG CTTGTCCGCGTACGACACGATTCGCCGCCGGGAATCATCAGCCACCACGACAGGTTGCTGCCCTGCGAACAGATGACGGT GCGAGGAATCCCGGTGACGACGCCGGCACGTACGGTATTCGACGTCGGCCGACGTGTGCGGTTGAACCGAGCAGTCGAGC TGACGGATGTTCTGCTCGGGTTGTGTACTGCGGATTCGGTGATGCGCATCGCTGAGCAGCATCGTGGGGCGCGGGGCCTG AGACAGTTGGACAGGGTGCTGGCGCGTGCGGATGCAGGTGCAGAGTCCGTGCAGGAGACACGCTTGAGGCTGTGCCTGGT GGATGGGGGATTACCCGAACCGGAGACTCAGATCGAACTGTGTGGGCCTGATGGACGAATGATTCGCCTGGACATGGGCT GGCGGGAGCAGCAGGTTGCCGCGGAGTTCGACGGCGCACAACACTGGGGAGATTCCATACAGCACCGTCGAGACATCGAG CGCCAGGAAGCAATCGCGTCGCTGGGATGGAGGCTGGTTCGGGTGAGCCGTGATCAGCTGTCCCAGCGGCCCGCCGCAGT CATCGAACGTGTGCGGGCGGCCTTGGCTGCGGCACGGCGCGCGGTGTAG
Upstream 100 bases:
>100_bases CCTCCCCGCCGACACGCCGTGTTATGCGTTGGCTACTCGCGAAATACATCAGAAACCGTAGTTTCGGTGACTTGTCGGTA CGCCGTGCAAGGGTCCTGCT
Downstream 100 bases:
>100_bases CAATCGAAACTACGGTTTCTGATGCATATCTCGAGTGGCCGACGCACAATACGGCGTGTCGGCGCAGAGGCGGCGCAGAG GCGGCGCCGTAGGCGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGGLIVASEALASGDVTRQELRKYYVKVFHNVHLRRGVELTAALRAEAAFLWSGRKAVVSGVSAAALHGNQWISAERPAE LVRVRHDSPPGIISHHDRLLPCEQMTVRGIPVTTPARTVFDVGRRVRLNRAVELTDVLLGLCTADSVMRIAEQHRGARGL RQLDRVLARADAGAESVQETRLRLCLVDGGLPEPETQIELCGPDGRMIRLDMGWREQQVAAEFDGAQHWGDSIQHRRDIE RQEAIASLGWRLVRVSRDQLSQRPAAVIERVRAALAAARRAV
Sequences:
>Translated_282_residues MGGLIVASEALASGDVTRQELRKYYVKVFHNVHLRRGVELTAALRAEAAFLWSGRKAVVSGVSAAALHGNQWISAERPAE LVRVRHDSPPGIISHHDRLLPCEQMTVRGIPVTTPARTVFDVGRRVRLNRAVELTDVLLGLCTADSVMRIAEQHRGARGL RQLDRVLARADAGAESVQETRLRLCLVDGGLPEPETQIELCGPDGRMIRLDMGWREQQVAAEFDGAQHWGDSIQHRRDIE RQEAIASLGWRLVRVSRDQLSQRPAAVIERVRAALAAARRAV >Mature_281_residues GGLIVASEALASGDVTRQELRKYYVKVFHNVHLRRGVELTAALRAEAAFLWSGRKAVVSGVSAAALHGNQWISAERPAEL VRVRHDSPPGIISHHDRLLPCEQMTVRGIPVTTPARTVFDVGRRVRLNRAVELTDVLLGLCTADSVMRIAEQHRGARGLR QLDRVLARADAGAESVQETRLRLCLVDGGLPEPETQIELCGPDGRMIRLDMGWREQQVAAEFDGAQHWGDSIQHRRDIER QEAIASLGWRLVRVSRDQLSQRPAAVIERVRAALAAARRAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31233; Mature: 31102
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLIVASEALASGDVTRQELRKYYVKVFHNVHLRRGVELTAALRAEAAFLWSGRKAVVS CCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH GVSAAALHGNQWISAERPAELVRVRHDSPPGIISHHDRLLPCEQMTVRGIPVTTPARTVF CHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHH DVGRRVRLNRAVELTDVLLGLCTADSVMRIAEQHRGARGLRQLDRVLARADAGAESVQET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHH RLRLCLVDGGLPEPETQIELCGPDGRMIRLDMGWREQQVAAEFDGAQHWGDSIQHRRDIE HHEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHH RQEAIASLGWRLVRVSRDQLSQRPAAVIERVRAALAAARRAV HHHHHHHHHHHHEEHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGLIVASEALASGDVTRQELRKYYVKVFHNVHLRRGVELTAALRAEAAFLWSGRKAVVS CCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH GVSAAALHGNQWISAERPAELVRVRHDSPPGIISHHDRLLPCEQMTVRGIPVTTPARTVF CHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHH DVGRRVRLNRAVELTDVLLGLCTADSVMRIAEQHRGARGLRQLDRVLARADAGAESVQET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHH RLRLCLVDGGLPEPETQIELCGPDGRMIRLDMGWREQQVAAEFDGAQHWGDSIQHRRDIE HHEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHH RQEAIASLGWRLVRVSRDQLSQRPAAVIERVRAALAAARRAV HHHHHHHHHHHHEEHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]