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The map label for this gene is liaF [H]

Identifier: 169833637

GI number: 169833637

Start: 447658

End: 448356

Strand: Direct

Name: liaF [H]

Synonym: SPH_0492

Alternate gene names: 169833637

Gene position: 447658-448356 (Clockwise)

Preceding gene: 169832980

Following gene: 169834224

Centisome position: 19.93

GC content: 39.06

Gene sequence:

>699_bases
ATGAGAAAATTTAAAATCTTTTTATTTATCGAAGCCTGTCTTCTGACAGGAGCTCTGATTTTGATGGTATCAGAGCATTT
TTCGCGTTTTCTGCTGATACTATTCCTCTTTTTGCTTTTGATTCGCTACTACACTGGTAAAGAGGGAAATAATCTTCTTT
TAGTAGCGGTAACCATTCTCTTCTTTTTCATCGTTATGCTCAATCCTTTTGTGATTCTAGCTATTTTTGTTGCGGTTATC
TATAGCCTCTTTCTTCTTTACCCGATGATGAACCAGGAAAAAGAGCAGACCAATTTGGTTTTTGAAGAGGTCGTGACGGT
TAAGAAGGAGAAAAATCGTTGGTTTGGAAATCTTCATCATTTTTCAAGCTACCAGACTTGCCAATTCGATGATATCAATC
TCTTTCGCTTCATGGGCAAGGACACTATTCATCTGGAGAGGGTCATCTTAACCAATCATGACAATGTCATTATCCTCAGA
AAGATAGTAGGAACGACCAAAATCATCGTACCTGTAGATGTGGAAGTCAGTCTCAGCGTTAACTGTCTCTATGGGGATTT
GACTTTTTTCAACCAGCCCAAGCGAGCCCTCCGCAATGAACACTATCATCAAGAAACAAAAGACTATCTCAAGAGTAACA
AGAGTGTCAAGATTTTCTTGACCACTATGATTGGTGATGTGGAGGTGGTTAGAGGATGA

Upstream 100 bases:

>100_bases
AAGGATCAGATGAAAAAGGCGTAACCAGCGCCTTTTTTCCATCCTCAGACTGAGGTGACTTTTTTGAATTGTGATAAAAT
AGAAGGGAGAGGATGAACCT

Downstream 100 bases:

>100_bases
AAAAACAAGCCTATGTCATTATTGCTCTCACCTCCTTCCTGTTTGTCTTTTTTTTCTCCCACAGCTTGCTGGAAATACTT
GATTTTGACTGGTCTATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRKFKIFLFIEACLLTGALILMVSEHFSRFLLILFLFLLLIRYYTGKEGNNLLLVAVTILFFFIVMLNPFVILAIFVAVI
YSLFLLYPMMNQEKEQTNLVFEEVVTVKKEKNRWFGNLHHFSSYQTCQFDDINLFRFMGKDTIHLERVILTNHDNVIILR
KIVGTTKIIVPVDVEVSLSVNCLYGDLTFFNQPKRALRNEHYHQETKDYLKSNKSVKIFLTTMIGDVEVVRG

Sequences:

>Translated_232_residues
MRKFKIFLFIEACLLTGALILMVSEHFSRFLLILFLFLLLIRYYTGKEGNNLLLVAVTILFFFIVMLNPFVILAIFVAVI
YSLFLLYPMMNQEKEQTNLVFEEVVTVKKEKNRWFGNLHHFSSYQTCQFDDINLFRFMGKDTIHLERVILTNHDNVIILR
KIVGTTKIIVPVDVEVSLSVNCLYGDLTFFNQPKRALRNEHYHQETKDYLKSNKSVKIFLTTMIGDVEVVRG
>Mature_232_residues
MRKFKIFLFIEACLLTGALILMVSEHFSRFLLILFLFLLLIRYYTGKEGNNLLLVAVTILFFFIVMLNPFVILAIFVAVI
YSLFLLYPMMNQEKEQTNLVFEEVVTVKKEKNRWFGNLHHFSSYQTCQFDDINLFRFMGKDTIHLERVILTNHDNVIILR
KIVGTTKIIVPVDVEVSLSVNCLYGDLTFFNQPKRALRNEHYHQETKDYLKSNKSVKIFLTTMIGDVEVVRG

Specific function: Unknown

COG id: COG4758

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016975 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27191; Mature: 27191

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFKIFLFIEACLLTGALILMVSEHFSRFLLILFLFLLLIRYYTGKEGNNLLLVAVTIL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHH
FFFIVMLNPFVILAIFVAVIYSLFLLYPMMNQEKEQTNLVFEEVVTVKKEKNRWFGNLHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHH
FSSYQTCQFDDINLFRFMGKDTIHLERVILTNHDNVIILRKIVGTTKIIVPVDVEVSLSV
CCCCCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEEHHCCEEEEEEECEEEEEEE
NCLYGDLTFFNQPKRALRNEHYHQETKDYLKSNKSVKIFLTTMIGDVEVVRG
EEEEECCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEECC
>Mature Secondary Structure
MRKFKIFLFIEACLLTGALILMVSEHFSRFLLILFLFLLLIRYYTGKEGNNLLLVAVTIL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHH
FFFIVMLNPFVILAIFVAVIYSLFLLYPMMNQEKEQTNLVFEEVVTVKKEKNRWFGNLHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHH
FSSYQTCQFDDINLFRFMGKDTIHLERVILTNHDNVIILRKIVGTTKIIVPVDVEVSLSV
CCCCCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCEEEEEEHHCCEEEEEEECEEEEEEE
NCLYGDLTFFNQPKRALRNEHYHQETKDYLKSNKSVKIFLTTMIGDVEVVRG
EEEEECCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]