| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
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The map label for this gene is 169832403
Identifier: 169832403
GI number: 169832403
Start: 519407
End: 522058
Strand: Direct
Name: 169832403
Synonym: SPH_0572
Alternate gene names: NA
Gene position: 519407-522058 (Clockwise)
Preceding gene: 169833612
Following gene: 169833874
Centisome position: 23.13
GC content: 39.78
Gene sequence:
>2652_bases ATGAAAAAAGTAAGAAAGATATTTCAGAAGGCAGTTGCAGGACTGTGCTGTATATCTCAGTTGACAGCTTTTTCTTCGAT AGTTGCTTTAGCAGAAACGCCTGAAACCAGTCCAGCGATAGGAAAAGTAGTGATTAAGGAGACAGGCGAAGGAGGAGCGC TTCTAGGAGATGCCGTCTTTGAGTTGAAAAACAATACGGATGGCACAACTGTTTCGCAAAGGACAGAGGCGCAAACAGGA GAAGCGATATTTTCAAACATAAAACCTGGGACATACACCTTGACAGAAGCCCAACCTCCAGTTGGTTATAAACCCTCTAC TAAACAATGGACTGTTGAAGTTGAGAAGAATGGTCGGACGACTGTCCAAGGTGAACAGGTAGAAAATCGAGAAGAGGCTC TATCTGACCAGTATCCACAAACAGGGACTTATCCAGATGTTCAAACACCTTATCAGATTATTAAGGTAGATGGTTCGGAA AAAAACGGACAGCACAAGGCGTTGAATCCGAATCCATATGAACGTGTGATTCCAGAAGGTACACTTTCAAAGAGAATTTA TCAAGTGAATAATTTGGATGATAACCAATATGGAATCGAGTTGACGGTTAGTGGTAAAACGACGGTTGAAACGAAAGAAG CCTCTACTCCGCTAGATGTTGTTATTCTATTAGATAACTCCAATAGTATGAGTAATATTCGACATAATCATGCCCATCGA GCGGAAAAAGCGGGAGAAGCGACACGAGCCCTTGTAGATAAGATTACCTCCAATCCAGATAATCGAGTAGCACTTGTGAC TTATGGCTCAACTATCTTTGACGGTTCAGAAGCTACTGTGGAAAAAGGGGTAGCAGATGCGAACGGAAAAATATTGAATG ACTCAGCTTTATGGACGTTCGATCGTACGACGTTTACAGCTAAAACTTATAATTATAGCTTTTTAAATCTCACATCAGAT CCTACTGATATTCAAACTATTAAGGATAGGATTCCATCAGATGCAGAGGAATTGAACAAAGACAAATTGATGTATCAATT CGGCGCGACTTTTACCCAGAAGGCTTTGATGACCGCTGATGATATCTTGACAAAGCAGGCAAGACCAAACAGTAAAAAGG TTATTTTCCACATTACAGATGGTGTTCCGACTATGTCATATCCAATTAATTTTAAATATACAGGAACGACGCAATCGTAC AGAACTCAGCTGAATAATTTTAAAGCAAAAACTCCAAATAGTAGCGGGATATTACTGGAGGACTTTGTTACATGGTCAGC AGATGGTGAACATAAGATTGTTCGTGGAGATGGTGAAAGTTATCAGATGTTTACGAAGAAACCTGTAACAGACCAATACG GAGTTCATCAAATACTTTCAATCACCTCCATGGAGCAGAGAGCTAAATTAGTTTCAGCGGGATATAGGTTCTATGGAACT GACTTGTATTTATATTGGCGTGATAGTATTCTAGCCTATCCATTTAACTCTAGTACCGATTGGATTACCAACCATGGTGA CCCTACGACTTGGTATTATAACGGAAATATGGCTCAGGATGGCTATGATGTCTTCACTGTTGGGGTTGGTGTAAACGGGG ATCCTGGTACGGATGAAGCAACGGCTACTAGATTTATGCAGAGCATCTCTAGTTCTCCTGACAACTACACTAACGTAGCA GATCCATCTCAGATTTTACAAGAATTGAATCGCTACTTCTATACTATCGTCAATGAGAAGAAATCTATCGAAAATGGTAC GATTACAGACCCGATGGGTGAACTAATTGATTTCCAATTGGGAGCAGATGGAAGGTTTGATCCAGCGGATTACACTTTAA CTGCAAACGATGGTAGTTCGTTGGTGAATAATGTCCCTACTGGGGGACCACAAAATGATGGTGGCTTGCTAAAAAATGCA AAAGTGTTCTATGATACGACTGAGAAAAGGATTCGTGTAACAGGTTTGTACCTTGGAACGGGTGAAAAAGTTACATTGAC TTATAATGTTCGCTTGAATGACCAATTTGTAAGCAATAAATTCTATGACACGAATGGTCGAACAACCCTACACCCTAAGG AAGTAGAAAAGAACACAGTGCGCGACTTCCCGATTCCTAAGATTCGTGATGTACGAAAGTATCCAGAAATCACAATTCCA AAAGAGAAAAAACTTGGTGAAATTGAGTTTATTAAGATCAATAAGAATGATAAAAAACCACTGAGAGATGCGGTCTTTAG TCTTCAAAAACAACATCCGGATTATCCAGATATTTATGGAGCTATTGATCAAAATGGCACTTATCAAAATGTGAGAACAG GTGAAGATGGTAAGTTGACCTTTAAAAATCTGTCAGATGGGAAATATCGATTATTTGAAAATTCTGAACCAGCTGGTTAT AAACCCGTTCAAAATAAGCCTATCGTTGCCTTCCAAATAGTAAATGGAGAAGTCAGAGATGTGACTTCAATCGTTCCACA AGATATACCAGCGGGTTACGAGTTTACGAATGATAAGCACTATATCACAAATGAGCCAATTCCTCCAAAAAGAGAATATC CTCGAACTGGTGGTATCGGAATGTTGCCATTCTATCTGATAGGTTGCATGATGATGGGAGGAGTTCTATTATACACACGG AAAAATCCGTAA
Upstream 100 bases:
>100_bases GAATAAGTAATCCGTTTCTTCGTGTATACAGATTGAAAGTACCTATGAATCATAGAAGGATTAACTTGTTCTATGAATAA TGCTTAACAGGGAGACACAC
Downstream 100 bases:
>100_bases AGTGTAGCAATGAGAAATGATAATATCGATACTCTGAGCGATACTTTTAAGAAGTAGCACTCAAGAAGAGATTTAAGTTT ACTTGGTGAAAACAGTTTTC
Product: cell wall surface anchor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 883; Mature: 883
Protein sequence:
>883_residues MKKVRKIFQKAVAGLCCISQLTAFSSIVALAETPETSPAIGKVVIKETGEGGALLGDAVFELKNNTDGTTVSQRTEAQTG EAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKNGRTTVQGEQVENREEALSDQYPQTGTYPDVQTPYQIIKVDGSE KNGQHKALNPNPYERVIPEGTLSKRIYQVNNLDDNQYGIELTVSGKTTVETKEASTPLDVVILLDNSNSMSNIRHNHAHR AEKAGEATRALVDKITSNPDNRVALVTYGSTIFDGSEATVEKGVADANGKILNDSALWTFDRTTFTAKTYNYSFLNLTSD PTDIQTIKDRIPSDAEELNKDKLMYQFGATFTQKALMTADDILTKQARPNSKKVIFHITDGVPTMSYPINFKYTGTTQSY RTQLNNFKAKTPNSSGILLEDFVTWSADGEHKIVRGDGESYQMFTKKPVTDQYGVHQILSITSMEQRAKLVSAGYRFYGT DLYLYWRDSILAYPFNSSTDWITNHGDPTTWYYNGNMAQDGYDVFTVGVGVNGDPGTDEATATRFMQSISSSPDNYTNVA DPSQILQELNRYFYTIVNEKKSIENGTITDPMGELIDFQLGADGRFDPADYTLTANDGSSLVNNVPTGGPQNDGGLLKNA KVFYDTTEKRIRVTGLYLGTGEKVTLTYNVRLNDQFVSNKFYDTNGRTTLHPKEVEKNTVRDFPIPKIRDVRKYPEITIP KEKKLGEIEFIKINKNDKKPLRDAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGY KPVQNKPIVAFQIVNGEVRDVTSIVPQDIPAGYEFTNDKHYITNEPIPPKREYPRTGGIGMLPFYLIGCMMMGGVLLYTR KNP
Sequences:
>Translated_883_residues MKKVRKIFQKAVAGLCCISQLTAFSSIVALAETPETSPAIGKVVIKETGEGGALLGDAVFELKNNTDGTTVSQRTEAQTG EAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKNGRTTVQGEQVENREEALSDQYPQTGTYPDVQTPYQIIKVDGSE KNGQHKALNPNPYERVIPEGTLSKRIYQVNNLDDNQYGIELTVSGKTTVETKEASTPLDVVILLDNSNSMSNIRHNHAHR AEKAGEATRALVDKITSNPDNRVALVTYGSTIFDGSEATVEKGVADANGKILNDSALWTFDRTTFTAKTYNYSFLNLTSD PTDIQTIKDRIPSDAEELNKDKLMYQFGATFTQKALMTADDILTKQARPNSKKVIFHITDGVPTMSYPINFKYTGTTQSY RTQLNNFKAKTPNSSGILLEDFVTWSADGEHKIVRGDGESYQMFTKKPVTDQYGVHQILSITSMEQRAKLVSAGYRFYGT DLYLYWRDSILAYPFNSSTDWITNHGDPTTWYYNGNMAQDGYDVFTVGVGVNGDPGTDEATATRFMQSISSSPDNYTNVA DPSQILQELNRYFYTIVNEKKSIENGTITDPMGELIDFQLGADGRFDPADYTLTANDGSSLVNNVPTGGPQNDGGLLKNA KVFYDTTEKRIRVTGLYLGTGEKVTLTYNVRLNDQFVSNKFYDTNGRTTLHPKEVEKNTVRDFPIPKIRDVRKYPEITIP KEKKLGEIEFIKINKNDKKPLRDAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGY KPVQNKPIVAFQIVNGEVRDVTSIVPQDIPAGYEFTNDKHYITNEPIPPKREYPRTGGIGMLPFYLIGCMMMGGVLLYTR KNP >Mature_883_residues MKKVRKIFQKAVAGLCCISQLTAFSSIVALAETPETSPAIGKVVIKETGEGGALLGDAVFELKNNTDGTTVSQRTEAQTG EAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKNGRTTVQGEQVENREEALSDQYPQTGTYPDVQTPYQIIKVDGSE KNGQHKALNPNPYERVIPEGTLSKRIYQVNNLDDNQYGIELTVSGKTTVETKEASTPLDVVILLDNSNSMSNIRHNHAHR AEKAGEATRALVDKITSNPDNRVALVTYGSTIFDGSEATVEKGVADANGKILNDSALWTFDRTTFTAKTYNYSFLNLTSD PTDIQTIKDRIPSDAEELNKDKLMYQFGATFTQKALMTADDILTKQARPNSKKVIFHITDGVPTMSYPINFKYTGTTQSY RTQLNNFKAKTPNSSGILLEDFVTWSADGEHKIVRGDGESYQMFTKKPVTDQYGVHQILSITSMEQRAKLVSAGYRFYGT DLYLYWRDSILAYPFNSSTDWITNHGDPTTWYYNGNMAQDGYDVFTVGVGVNGDPGTDEATATRFMQSISSSPDNYTNVA DPSQILQELNRYFYTIVNEKKSIENGTITDPMGELIDFQLGADGRFDPADYTLTANDGSSLVNNVPTGGPQNDGGLLKNA KVFYDTTEKRIRVTGLYLGTGEKVTLTYNVRLNDQFVSNKFYDTNGRTTLHPKEVEKNTVRDFPIPKIRDVRKYPEITIP KEKKLGEIEFIKINKNDKKPLRDAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGY KPVQNKPIVAFQIVNGEVRDVTSIVPQDIPAGYEFTNDKHYITNEPIPPKREYPRTGGIGMLPFYLIGCMMMGGVLLYTR KNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98455; Mature: 98455
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVRKIFQKAVAGLCCISQLTAFSSIVALAETPETSPAIGKVVIKETGEGGALLGDAVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEECCEEE ELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKNGRT EECCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCE TVQGEQVENREEALSDQYPQTGTYPDVQTPYQIIKVDGSEKNGQHKALNPNPYERVIPEG EECCHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCC TLSKRIYQVNNLDDNQYGIELTVSGKTTVETKEASTPLDVVILLDNSNSMSNIRHNHAHR CHHHHEEEECCCCCCCEEEEEEECCCEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHH AEKAGEATRALVDKITSNPDNRVALVTYGSTIFDGSEATVEKGVADANGKILNDSALWTF HHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHCCCCCCCCEEEECCEEEEE DRTTFTAKTYNYSFLNLTSDPTDIQTIKDRIPSDAEELNKDKLMYQFGATFTQKALMTAD ECEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCHHHCCHHHEEHHHCCHHHHHHHHHHH DILTKQARPNSKKVIFHITDGVPTMSYPINFKYTGTTQSYRTQLNNFKAKTPNSSGILLE HHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEE DFVTWSADGEHKIVRGDGESYQMFTKKPVTDQYGVHQILSITSMEQRAKLVSAGYRFYGT EEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC DLYLYWRDSILAYPFNSSTDWITNHGDPTTWYYNGNMAQDGYDVFTVGVGVNGDPGTDEA EEEEEEECCEEEECCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHH TATRFMQSISSSPDNYTNVADPSQILQELNRYFYTIVNEKKSIENGTITDPMGELIDFQL HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHEEEE GADGRFDPADYTLTANDGSSLVNNVPTGGPQNDGGLLKNAKVFYDTTEKRIRVTGLYLGT CCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCEECCEEEEECCCCEEEEEEEEECC GEKVTLTYNVRLNDQFVSNKFYDTNGRTTLHPKEVEKNTVRDFPIPKIRDVRKYPEITIP CCEEEEEEEEEECCHHHCCCEECCCCCEEECHHHHCCCCCCCCCCCCHHHHHHCCCEECC KEKKLGEIEFIKINKNDKKPLRDAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLT CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE FKNLSDGKYRLFENSEPAGYKPVQNKPIVAFQIVNGEVRDVTSIVPQDIPAGYEFTNDKH EEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCEECCCCE YITNEPIPPKREYPRTGGIGMLPFYLIGCMMMGGVLLYTRKNP EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCC >Mature Secondary Structure MKKVRKIFQKAVAGLCCISQLTAFSSIVALAETPETSPAIGKVVIKETGEGGALLGDAVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEECCEEE ELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKNGRT EECCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCE TVQGEQVENREEALSDQYPQTGTYPDVQTPYQIIKVDGSEKNGQHKALNPNPYERVIPEG EECCHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCC TLSKRIYQVNNLDDNQYGIELTVSGKTTVETKEASTPLDVVILLDNSNSMSNIRHNHAHR CHHHHEEEECCCCCCCEEEEEEECCCEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHH AEKAGEATRALVDKITSNPDNRVALVTYGSTIFDGSEATVEKGVADANGKILNDSALWTF HHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCHHHHHCCCCCCCCEEEECCEEEEE DRTTFTAKTYNYSFLNLTSDPTDIQTIKDRIPSDAEELNKDKLMYQFGATFTQKALMTAD ECEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCHHHCCHHHEEHHHCCHHHHHHHHHHH DILTKQARPNSKKVIFHITDGVPTMSYPINFKYTGTTQSYRTQLNNFKAKTPNSSGILLE HHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEE DFVTWSADGEHKIVRGDGESYQMFTKKPVTDQYGVHQILSITSMEQRAKLVSAGYRFYGT EEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC DLYLYWRDSILAYPFNSSTDWITNHGDPTTWYYNGNMAQDGYDVFTVGVGVNGDPGTDEA EEEEEEECCEEEECCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHH TATRFMQSISSSPDNYTNVADPSQILQELNRYFYTIVNEKKSIENGTITDPMGELIDFQL HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHEEEE GADGRFDPADYTLTANDGSSLVNNVPTGGPQNDGGLLKNAKVFYDTTEKRIRVTGLYLGT CCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCEECCEEEEECCCCEEEEEEEEECC GEKVTLTYNVRLNDQFVSNKFYDTNGRTTLHPKEVEKNTVRDFPIPKIRDVRKYPEITIP CCEEEEEEEEEECCHHHCCCEECCCCCEEECHHHHCCCCCCCCCCCCHHHHHHCCCEECC KEKKLGEIEFIKINKNDKKPLRDAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLT CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE FKNLSDGKYRLFENSEPAGYKPVQNKPIVAFQIVNGEVRDVTSIVPQDIPAGYEFTNDKH EEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCEECCCCE YITNEPIPPKREYPRTGGIGMLPFYLIGCMMMGGVLLYTRKNP EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA