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The map label for this gene is lemA [H]

Identifier: 169824257

GI number: 169824257

Start: 623288

End: 623842

Strand: Direct

Name: lemA [H]

Synonym: FMG_0560

Alternate gene names: 169824257

Gene position: 623288-623842 (Clockwise)

Preceding gene: 169824256

Following gene: 169824258

Centisome position: 34.67

GC content: 32.25

Gene sequence:

>555_bases
ATGAAAAAAGCAGGAGTTATTATAGGTATTATTGTAGTATTAGCATTATTGTTAATACCACAATACAATGGATTAGTTCA
GTCAAAAGAAAATGTGAATGAGGCTTATGCACAAGTTCAAAATGTTGTTCAAAGGAGAGCGGATTTAATTCCAAACTTGG
TTAACACAGCAAAAGGATTTGCAAAACACGAAGAAGATGTGTTCATCAAAGTTTCTGAAGCTAGAAGCGGCGTAAAGAAT
GCAAAAGATCCACAAGAATTAGCAAAAGCAAATGATGAGTTGACAAATGCATTAAATGGAATGAATGTTGTTGTCGAAAG
ATATCCAGAATTAAAATCAGATACACATTTCACACAACTTATGGATGAATTAGCAGGCTCTGAAAATAGAATAGCTACAG
AAAGAAAGAATTATAACACAGTTGTAAAAACATACAATCAAAAAGTTAAGAGATTCCCAACAGTAATATTTGCTAGATTA
ATGGGATTCAGTTCTGAAAAATACTTTGAAGCTGATGCTTCAGCACAAAAAGCACCACAAGTTAATTTTGAATAG

Upstream 100 bases:

>100_bases
ACGATGTCAAAAGAGAAGAAGAAAATTTAGATATTGAAGCCTTGGTTCAAGAGTGTATTGATAATATGGAATTGATTAAG
ATTAGACAATAGGAGGAAAT

Downstream 100 bases:

>100_bases
GACAAATAAATAATGAGAAAGCAATGTAGATGGATATTCTCATTTGTTTTAGCTTTTTTATTAATTTTTAATGTAAATGC
TTTTGCCCAAGATTTACCGA

Product: cytoplasmic membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKAGVIIGIIVVLALLLIPQYNGLVQSKENVNEAYAQVQNVVQRRADLIPNLVNTAKGFAKHEEDVFIKVSEARSGVKN
AKDPQELAKANDELTNALNGMNVVVERYPELKSDTHFTQLMDELAGSENRIATERKNYNTVVKTYNQKVKRFPTVIFARL
MGFSSEKYFEADASAQKAPQVNFE

Sequences:

>Translated_184_residues
MKKAGVIIGIIVVLALLLIPQYNGLVQSKENVNEAYAQVQNVVQRRADLIPNLVNTAKGFAKHEEDVFIKVSEARSGVKN
AKDPQELAKANDELTNALNGMNVVVERYPELKSDTHFTQLMDELAGSENRIATERKNYNTVVKTYNQKVKRFPTVIFARL
MGFSSEKYFEADASAQKAPQVNFE
>Mature_184_residues
MKKAGVIIGIIVVLALLLIPQYNGLVQSKENVNEAYAQVQNVVQRRADLIPNLVNTAKGFAKHEEDVFIKVSEARSGVKN
AKDPQELAKANDELTNALNGMNVVVERYPELKSDTHFTQLMDELAGSENRIATERKNYNTVVKTYNQKVKRFPTVIFARL
MGFSSEKYFEADASAQKAPQVNFE

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20604; Mature: 20604

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAGVIIGIIVVLALLLIPQYNGLVQSKENVNEAYAQVQNVVQRRADLIPNLVNTAKGF
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKHEEDVFIKVSEARSGVKNAKDPQELAKANDELTNALNGMNVVVERYPELKSDTHFTQL
HCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MDELAGSENRIATERKNYNTVVKTYNQKVKRFPTVIFARLMGFSSEKYFEADASAQKAPQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCC
VNFE
CCCC
>Mature Secondary Structure
MKKAGVIIGIIVVLALLLIPQYNGLVQSKENVNEAYAQVQNVVQRRADLIPNLVNTAKGF
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKHEEDVFIKVSEARSGVKNAKDPQELAKANDELTNALNGMNVVVERYPELKSDTHFTQL
HCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MDELAGSENRIATERKNYNTVVKTYNQKVKRFPTVIFARLMGFSSEKYFEADASAQKAPQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCC
VNFE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]