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The map label for this gene is yaaJ [C]

Identifier: 169824135

GI number: 169824135

Start: 494522

End: 495913

Strand: Direct

Name: yaaJ [C]

Synonym: FMG_0438

Alternate gene names: 169824135

Gene position: 494522-495913 (Clockwise)

Preceding gene: 169824131

Following gene: 169824137

Centisome position: 27.51

GC content: 36.35

Gene sequence:

>1392_bases
ATGGATCAAAAAGTATTGAACGATACCATAGTGGCCATTAACAGTTTTCTAAGTAATAATATTTTATTAATTGCACTTTT
AGGTTGCGGTATTTTCTACACAATCTATTCAAAAGGTGTTCAATTTAGAAAATTAGGCGCAGCATTTAAACAAACTTTTG
GAGGAGTTTTCTCAAAAGAAAAGAAATCTGGAGACGAAGGAGTATCTTCTTTCCAAGCATTAGCAGTAGCTATAGCAGCT
CAAGTAGGTACTGGAAACGTTGCAGGGGTTGCAACAGCTATCATGGCAGGTGGTCCAGGAGCAATATTCTGGATGTGGTT
AGCAGCAATACTAGGTATGGCTACAATCTACGCCGAAGCAGTTTTAGCACAAAAATTTAGAGAAAAAGACGATGAAGGCA
ACTTCGTCGGAGGTCCTGCATACTACATTAAAAATGGTATTGGACCAAAACATCCTGGATTAGCAAAAGTGATGTCAACA
GCATTTGCGATTTTAATCGTAATTGCATTAGGATTCGTAGGTAACATAGTTCAATCAAACTCAATTGCAACAAGTGTTGT
AGCAGCTACTGGTGGTAAACTTAATCCTATTATTGTAGGTATTGTAGTTGCAGTATTAGCCGGTGGAGTATTCATTGGTG
GTATTAAGAGAATTGCAAACTTTGCTCAATTAGTAGTTCCTTTCATGGCATTAGTTTATATAATAGCTGCAATTATAATG
ATGGTTAAATTCCACGCTCACATTATTCCAGCATTCAAACTTATATTTGAAGCAGCTTTCAATCCAGAAGCAGCTCTTGG
TGGTGCATTAGGTATTACAATTAAAATGGCAGCAGCTAAAGGTGTTGGTAGAGGATTATTCTCTAACGAAGCTGGTATGG
GTTCTACACCACACGCTCACGCTACAGCTAATGTAGCTCACCCTGTATTACAAGGTTACACAGCTATGGTTGGTGTATTC
ATAGATACTATCGTTATTTGTACAGTAACAGCATTAATGATTTTAGTTACAGAAGCTTGGACAGATAAAAGTCTTAATGG
TGCATTAGTTACTCAAGAAGCTTTTACTAGAGCTTTTGGACCTACTGGTACAATTTTACTTGCGGTTGCATTAGGATTCT
TCGCATTTACAACTATAGTTGGTTGGTATTACTTCGGTGAAACAAACATCAGATTCTTATTCGGTCATAAAGGTTTGTGG
CCTTACAGAATTTTAGTATTGTTATGTATCATTGCAGGTTCTTTACAAGAAGTAGACTTAGTATGGAACACAGCTGACTT
AACAAACTCACTAATGGTTATACCAAACATTATCGCTATCATTATGCTTCATAAACACGTTAAGAATATGACTTTACATT
ATGAAACAAATGGTAAAGAAGGTTCATTATAA

Upstream 100 bases:

>100_bases
AATGCTTGACATAAACAAATTTGAGAGAAGATTTGTTGTATCATATTTTAATCACAATAAAGGTTTTCAAGTATCTCAAA
AAATTTAAGGAGGAAATATT

Downstream 100 bases:

>100_bases
AATAAGTCAAGATTTATTTATAAGAGATAAAAAGCATCACGAAAGTGGTGCTTTTTATTTGTTTAAAAGCATTTTAAATA
CGATTCATGAAAAATTGAAT

Product: sodium/alanine symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MDQKVLNDTIVAINSFLSNNILLIALLGCGIFYTIYSKGVQFRKLGAAFKQTFGGVFSKEKKSGDEGVSSFQALAVAIAA
QVGTGNVAGVATAIMAGGPGAIFWMWLAAILGMATIYAEAVLAQKFREKDDEGNFVGGPAYYIKNGIGPKHPGLAKVMST
AFAILIVIALGFVGNIVQSNSIATSVVAATGGKLNPIIVGIVVAVLAGGVFIGGIKRIANFAQLVVPFMALVYIIAAIIM
MVKFHAHIIPAFKLIFEAAFNPEAALGGALGITIKMAAAKGVGRGLFSNEAGMGSTPHAHATANVAHPVLQGYTAMVGVF
IDTIVICTVTALMILVTEAWTDKSLNGALVTQEAFTRAFGPTGTILLAVALGFFAFTTIVGWYYFGETNIRFLFGHKGLW
PYRILVLLCIIAGSLQEVDLVWNTADLTNSLMVIPNIIAIIMLHKHVKNMTLHYETNGKEGSL

Sequences:

>Translated_463_residues
MDQKVLNDTIVAINSFLSNNILLIALLGCGIFYTIYSKGVQFRKLGAAFKQTFGGVFSKEKKSGDEGVSSFQALAVAIAA
QVGTGNVAGVATAIMAGGPGAIFWMWLAAILGMATIYAEAVLAQKFREKDDEGNFVGGPAYYIKNGIGPKHPGLAKVMST
AFAILIVIALGFVGNIVQSNSIATSVVAATGGKLNPIIVGIVVAVLAGGVFIGGIKRIANFAQLVVPFMALVYIIAAIIM
MVKFHAHIIPAFKLIFEAAFNPEAALGGALGITIKMAAAKGVGRGLFSNEAGMGSTPHAHATANVAHPVLQGYTAMVGVF
IDTIVICTVTALMILVTEAWTDKSLNGALVTQEAFTRAFGPTGTILLAVALGFFAFTTIVGWYYFGETNIRFLFGHKGLW
PYRILVLLCIIAGSLQEVDLVWNTADLTNSLMVIPNIIAIIMLHKHVKNMTLHYETNGKEGSL
>Mature_463_residues
MDQKVLNDTIVAINSFLSNNILLIALLGCGIFYTIYSKGVQFRKLGAAFKQTFGGVFSKEKKSGDEGVSSFQALAVAIAA
QVGTGNVAGVATAIMAGGPGAIFWMWLAAILGMATIYAEAVLAQKFREKDDEGNFVGGPAYYIKNGIGPKHPGLAKVMST
AFAILIVIALGFVGNIVQSNSIATSVVAATGGKLNPIIVGIVVAVLAGGVFIGGIKRIANFAQLVVPFMALVYIIAAIIM
MVKFHAHIIPAFKLIFEAAFNPEAALGGALGITIKMAAAKGVGRGLFSNEAGMGSTPHAHATANVAHPVLQGYTAMVGVF
IDTIVICTVTALMILVTEAWTDKSLNGALVTQEAFTRAFGPTGTILLAVALGFFAFTTIVGWYYFGETNIRFLFGHKGLW
PYRILVLLCIIAGSLQEVDLVWNTADLTNSLMVIPNIIAIIMLHKHVKNMTLHYETNGKEGSL

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=461, Percent_Identity=36.4425162689805, Blast_Score=267, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48877; Mature: 48877

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
>Mature Secondary Structure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EEECHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]