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The map label for this gene is deoD [H]

Identifier: 169824101

GI number: 169824101

Start: 460325

End: 461029

Strand: Direct

Name: deoD [H]

Synonym: FMG_0404

Alternate gene names: 169824101

Gene position: 460325-461029 (Clockwise)

Preceding gene: 169824100

Following gene: 169824102

Centisome position: 25.61

GC content: 34.18

Gene sequence:

>705_bases
ATGTCAACACCACATATCGAAGCGAAAAAAGGAGATATCGCAAAAACAGTTTTATTGCCAGGAGATCCATTGAGAGCGAA
ATTTATCGCAGATAATTTCTTAGAAGATGTAAAACAATTCAACGCGGTTAGAAATATGTTTGGATATACTGGAAAATACA
AAGGCAAAGAAATTTCTGTTATGGGAACTGGAATGGGAATACCATCTATAGGAATTTATTCTTATGAACTTATCAACGAA
TACGGAGTTGAAAATCTTATCAGAATCGGTTCAGCAGGAGCTTACAGCAAAGATTTGGATTTGTATGATGTTGTAATAGC
AATGGGAAGTTGTTCAGATTCAAATTTTGCTCACCAATTCGATTTGGAAGGAACTTTTTCAGCGATTTGCGATTATGATT
TGTTGAGAAAAGCAGTAAATGTTGCAGAATCAAAAAATATAGATGTTCACGTTGGAAATGTGTTCTCTGCAGATATTTTC
TACAATCAAAAATCAGAAGAATGGAAAAAATGGGAAAAAATGGGCGTATTAGCAGTTGAAATGGAAAGCTACGGATTGTA
TTTGACAGCAAAGGCAAACAATGCAAGAGCTTTGACTATTTTGACAATTTCTGACTCATTCCATTCAGACAAGCAAACTA
CTCCAGAAGAAAGACAAACATCATTTACAAAAATGATGGAAATCGCATTAGAATTAGGTGAATAA

Upstream 100 bases:

>100_bases
CGTGTATTATGAAGCTTACATTGAAAAATACTTGGATGATTGCCAGCTAGATTTGGTAAAATTTTTGAATATGATTATAG
TAAATTATTAGGAGGTTATT

Downstream 100 bases:

>100_bases
TATGGAATTAAATAAATATATCGATCATACTTTATTAAAAGCTGATGCAACATCAGCTGACATCAAAAAAATCTGTGATG
AAGCAATAAAATACGATTTT

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSTPHIEAKKGDIAKTVLLPGDPLRAKFIADNFLEDVKQFNAVRNMFGYTGKYKGKEISVMGTGMGIPSIGIYSYELINE
YGVENLIRIGSAGAYSKDLDLYDVVIAMGSCSDSNFAHQFDLEGTFSAICDYDLLRKAVNVAESKNIDVHVGNVFSADIF
YNQKSEEWKKWEKMGVLAVEMESYGLYLTAKANNARALTILTISDSFHSDKQTTPEERQTSFTKMMEIALELGE

Sequences:

>Translated_234_residues
MSTPHIEAKKGDIAKTVLLPGDPLRAKFIADNFLEDVKQFNAVRNMFGYTGKYKGKEISVMGTGMGIPSIGIYSYELINE
YGVENLIRIGSAGAYSKDLDLYDVVIAMGSCSDSNFAHQFDLEGTFSAICDYDLLRKAVNVAESKNIDVHVGNVFSADIF
YNQKSEEWKKWEKMGVLAVEMESYGLYLTAKANNARALTILTISDSFHSDKQTTPEERQTSFTKMMEIALELGE
>Mature_233_residues
STPHIEAKKGDIAKTVLLPGDPLRAKFIADNFLEDVKQFNAVRNMFGYTGKYKGKEISVMGTGMGIPSIGIYSYELINEY
GVENLIRIGSAGAYSKDLDLYDVVIAMGSCSDSNFAHQFDLEGTFSAICDYDLLRKAVNVAESKNIDVHVGNVFSADIFY
NQKSEEWKKWEKMGVLAVEMESYGLYLTAKANNARALTILTISDSFHSDKQTTPEERQTSFTKMMEIALELGE

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=231, Percent_Identity=52.8138528138528, Blast_Score=255, Evalue=2e-69,
Organism=Escherichia coli, GI1790265, Length=210, Percent_Identity=29.5238095238095, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 26037; Mature: 25906

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPHIEAKKGDIAKTVLLPGDPLRAKFIADNFLEDVKQFNAVRNMFGYTGKYKGKEISV
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGTGMGIPSIGIYSYELINEYGVENLIRIGSAGAYSKDLDLYDVVIAMGSCSDSNFAHQF
EECCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCEEE
DLEGTFSAICDYDLLRKAVNVAESKNIDVHVGNVFSADIFYNQKSEEWKKWEKMGVLAVE
CCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCHHHHHHHHHHCEEEEE
MESYGLYLTAKANNARALTILTISDSFHSDKQTTPEERQTSFTKMMEIALELGE
EECCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STPHIEAKKGDIAKTVLLPGDPLRAKFIADNFLEDVKQFNAVRNMFGYTGKYKGKEISV
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGTGMGIPSIGIYSYELINEYGVENLIRIGSAGAYSKDLDLYDVVIAMGSCSDSNFAHQF
EECCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCEEE
DLEGTFSAICDYDLLRKAVNVAESKNIDVHVGNVFSADIFYNQKSEEWKKWEKMGVLAVE
CCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCHHHHHHHHHHCEEEEE
MESYGLYLTAKANNARALTILTISDSFHSDKQTTPEERQTSFTKMMEIALELGE
EECCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA