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The map label for this gene is 169824092

Identifier: 169824092

GI number: 169824092

Start: 452174

End: 452782

Strand: Direct

Name: 169824092

Synonym: FMG_0395

Alternate gene names: NA

Gene position: 452174-452782 (Clockwise)

Preceding gene: 169824091

Following gene: 169824094

Centisome position: 25.15

GC content: 32.35

Gene sequence:

>609_bases
ATGAGTAAATTTTATGCGGTAAAAATTGGGAGAAATCCTGGAATATACAATAGTTGGGCTGAATGCCAAGAGCAAGTAAA
TGGTTTTAAGGGAGCGATTTACAAATCTTTTAAAACAAAAGAAGAGGCAGATAATTTTATCAATGGAGATGATAATAAAA
AAGTAGCGTCAATTGATAACTTAAGTGAAAATGAGTGTGTGGCTTATGTAGATGGTTCGTTCAAAAAAGACACGGGAGAA
TATAGTTTTGGTTGCGTGTTGTTTCATAATGGGAAAATCGACAAATTCAATAAAAAATATCCTCAATCAGAATATTCAAC
TCACAGAAATGTATCTGGAGAAGTAAGTGGGTCGGTATTTGCAATTAAAAAAGCAGTCGAACTTAAAATGAACAAAATCA
CGATTTTTTATGATTATCAAGGAATTGAAAGCTGGGCTAATGGAGATTGGAAAACAAACAATAATTTAACTAGAAACTAC
AAGAAATTTATCGACGAAATAAAATCTAAAATCGACATAAATTTCGTAAAAGTCAAAGGTCACTCCAACGACACTTATAA
CGATATGGCTGATGAATTGGCAAAACAAGCATTGGGGATAGGGAAATAA

Upstream 100 bases:

>100_bases
ACGGAAATTACTGGGACTAATTCTAATGAAATTGTAATCGATGATGATGGATTTGGAGATTTTGAAGTAGGAGCTGGAAC
TTTGAGCTTGTGGGTATGTA

Downstream 100 bases:

>100_bases
AAAAGTATTTAAAAAATTAAAGTAGATTATATTTTTGGCAAAAATGTAATCTACTTTTTTAATTAGAAATTTTCCCATAA
AAAAAAACTCTCACGAATTC

Product: ribonuclease H-like protein

Products: NA

Alternate protein names: Ribonuclease HI; Ribonuclease H-Related Protein; RNAse H Family Protein; Ribonuclease; Ribonuclease H1-Like; RNAse H

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSKFYAVKIGRNPGIYNSWAECQEQVNGFKGAIYKSFKTKEEADNFINGDDNKKVASIDNLSENECVAYVDGSFKKDTGE
YSFGCVLFHNGKIDKFNKKYPQSEYSTHRNVSGEVSGSVFAIKKAVELKMNKITIFYDYQGIESWANGDWKTNNNLTRNY
KKFIDEIKSKIDINFVKVKGHSNDTYNDMADELAKQALGIGK

Sequences:

>Translated_202_residues
MSKFYAVKIGRNPGIYNSWAECQEQVNGFKGAIYKSFKTKEEADNFINGDDNKKVASIDNLSENECVAYVDGSFKKDTGE
YSFGCVLFHNGKIDKFNKKYPQSEYSTHRNVSGEVSGSVFAIKKAVELKMNKITIFYDYQGIESWANGDWKTNNNLTRNY
KKFIDEIKSKIDINFVKVKGHSNDTYNDMADELAKQALGIGK
>Mature_201_residues
SKFYAVKIGRNPGIYNSWAECQEQVNGFKGAIYKSFKTKEEADNFINGDDNKKVASIDNLSENECVAYVDGSFKKDTGEY
SFGCVLFHNGKIDKFNKKYPQSEYSTHRNVSGEVSGSVFAIKKAVELKMNKITIFYDYQGIESWANGDWKTNNNLTRNYK
KFIDEIKSKIDINFVKVKGHSNDTYNDMADELAKQALGIGK

Specific function: Unknown

COG id: COG3341

COG function: function code R; Predicted double-stranded RNA/RNA-DNA hybrid binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI17137476, Length=46, Percent_Identity=67.3913043478261, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45552509, Length=46, Percent_Identity=67.3913043478261, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22934; Mature: 22803

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFYAVKIGRNPGIYNSWAECQEQVNGFKGAIYKSFKTKEEADNFINGDDNKKVASIDN
CCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCEEEECCC
LSENECVAYVDGSFKKDTGEYSFGCVLFHNGKIDKFNKKYPQSEYSTHRNVSGEVSGSVF
CCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCE
AIKKAVELKMNKITIFYDYQGIESWANGDWKTNNNLTRNYKKFIDEIKSKIDINFVKVKG
EEHHHHEEEEEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEC
HSNDTYNDMADELAKQALGIGK
CCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKFYAVKIGRNPGIYNSWAECQEQVNGFKGAIYKSFKTKEEADNFINGDDNKKVASIDN
CCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCEEEECCC
LSENECVAYVDGSFKKDTGEYSFGCVLFHNGKIDKFNKKYPQSEYSTHRNVSGEVSGSVF
CCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCE
AIKKAVELKMNKITIFYDYQGIESWANGDWKTNNNLTRNYKKFIDEIKSKIDINFVKVKG
EEHHHHEEEEEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEC
HSNDTYNDMADELAKQALGIGK
CCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA