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The map label for this gene is ctsR [H]

Identifier: 169824029

GI number: 169824029

Start: 386306

End: 386767

Strand: Direct

Name: ctsR [H]

Synonym: FMG_0332

Alternate gene names: 169824029

Gene position: 386306-386767 (Clockwise)

Preceding gene: 169824028

Following gene: 169824030

Centisome position: 21.49

GC content: 33.55

Gene sequence:

>462_bases
ATGGCAGGGCTTAGTAACAGCATTGAAGCTTTTTTGAAGGAATTGTTGAGTAATACTGACGATGATTTCATTGAAATAGG
CAGAAATGATCTTGCCAATCAATTTAATTGCGCTCCATCGCAAATTAATTACGTTCTGACTACTAGATTTACTCCTTACA
AGGGTTATTATATTGAAAGTAGACGCGGTGGAAGTGGATATGTTAAAATAATAAAATTAACAATTAAAGACAGTAATCCG
ATTAAGGAGATTGTCGAAAATGTTATTGGAGATAGAATTACGAAGGATAAGTCGAACAATATTATTAATATGCTTTTGGA
TGAGGATTTGATAACTGAAAGGGAAGCTTTGGTTATGGTTCATGCTTTGGAGGATAATACTTTGTCGAAGGTGGATTTTA
ATGATAGGAATATTCTGAGGGCTGATTTGTTGAAGAATATGTTGTTGGCTTTTATGAGATAG

Upstream 100 bases:

>100_bases
AGGATTTTGTTGTTGAAGTGAAAGGTCAAAGATGGTATAATTTAAGAAAGATAAATTTTTTTTATTCAATTAGTCAGAGA
AAGTCAAAAGAGGTGATAGT

Downstream 100 bases:

>100_bases
AGGTGATTATATGAATTGCGATAATTGTGGCAAACCGGCTTTTATTCAAGTAAAGATCGTGGGACCTTTTGGTGCTCGTG
ATGTGAATTTGTGTCATGAT

Product: transcriptional regulator CtsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAGLSNSIEAFLKELLSNTDDDFIEIGRNDLANQFNCAPSQINYVLTTRFTPYKGYYIESRRGGSGYVKIIKLTIKDSNP
IKEIVENVIGDRITKDKSNNIINMLLDEDLITEREALVMVHALEDNTLSKVDFNDRNILRADLLKNMLLAFMR

Sequences:

>Translated_153_residues
MAGLSNSIEAFLKELLSNTDDDFIEIGRNDLANQFNCAPSQINYVLTTRFTPYKGYYIESRRGGSGYVKIIKLTIKDSNP
IKEIVENVIGDRITKDKSNNIINMLLDEDLITEREALVMVHALEDNTLSKVDFNDRNILRADLLKNMLLAFMR
>Mature_152_residues
AGLSNSIEAFLKELLSNTDDDFIEIGRNDLANQFNCAPSQINYVLTTRFTPYKGYYIESRRGGSGYVKIIKLTIKDSNPI
KEIVENVIGDRITKDKSNNIINMLLDEDLITEREALVMVHALEDNTLSKVDFNDRNILRADLLKNMLLAFMR

Specific function: Negative regulator of clpC, clpB and clpP transcription by binding directly and specifically to their promoter region [H]

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008463 [H]

Pfam domain/function: PF05848 CtsR [H]

EC number: NA

Molecular weight: Translated: 17449; Mature: 17318

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLSNSIEAFLKELLSNTDDDFIEIGRNDLANQFNCAPSQINYVLTTRFTPYKGYYIES
CCCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCCCHHHCCEEEEEECCCCCCEEEEC
RRGGSGYVKIIKLTIKDSNPIKEIVENVIGDRITKDKSNNIINMLLDEDLITEREALVMV
CCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCHHHEEEE
HALEDNTLSKVDFNDRNILRADLLKNMLLAFMR
EECCCCCEEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGLSNSIEAFLKELLSNTDDDFIEIGRNDLANQFNCAPSQINYVLTTRFTPYKGYYIES
CCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCCCHHHCCEEEEEECCCCCCEEEEC
RRGGSGYVKIIKLTIKDSNPIKEIVENVIGDRITKDKSNNIINMLLDEDLITEREALVMV
CCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCHHHEEEE
HALEDNTLSKVDFNDRNILRADLLKNMLLAFMR
EECCCCCEEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA