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The map label for this gene is 167626197

Identifier: 167626197

GI number: 167626197

Start: 5203944

End: 5205173

Strand: Reverse

Name: 167626197

Synonym: Shal_4292

Alternate gene names: NA

Gene position: 5205173-5203944 (Counterclockwise)

Preceding gene: 167626198

Following gene: 167626196

Centisome position: 99.58

GC content: 49.84

Gene sequence:

>1230_bases
ATGAAAAGGACTAAAGGCCGTATTATCTACGGCGCAATTCTGATGTTGTCAGGGGCACTGCTTATCAGTGGCTGGAGTAT
CGGCTTTTCCGGTAGTCGTCACTATATCGATGCAACAAGCGTGATGACAGCTAAAGTGCAAAGTGGCGAGTTTACTCAGC
GGATCAGAGGTTATGGCACGCTGATGTCACAAAACCAGCGACTCATTACCGCCAGCAGTTTGGCTGTGGTCGATGAAATA
AAGCTCCATCCTGGGGCCGAAGTTAGCGCCAATAGCATCTTACTCATCTTAAAGAATCCCCAGCTCGATAGTGCGCTACA
GCAAGCGGAAACCAATGTACATAACAGTCGTACGACCAAGCGAAAGCTGATGCTTGAGCAGCAGCGTGAACTGCTGGATC
AAGCCTCTAGCTTGGCTGAGTTTAAGGCCGATGCCGAAATCGCTAACTTACAGGTGGAAGCCGAGTCGCCACTGGCGGCA
GAGGGGATCATCTCTGCAATGGATATGCGGCTCAGTCGCTTGAGGGCAAAACAACTCAATGAACGCTTAAAGCTTGGCCA
GGATAAACTGGGTAAGTTACGTGAGGTTCATGCCGAGCATCTGCTTATTCAAACAGAAATAATCAAGCAGGCAGAGTCAG
AGCTCGCTACGGCGCAAAATCGACGAGAGCAACTTGTTGTGCGTGCAGGTATTGAGGGAGTGCTGCAACGCTTACCGATA
AAGTTGGGGCAGAGCGTTAATGTGGGGGATGAGCTGGCTCTGGTGGGGAGCTTGTCGCCTCTGATCGCCGAGATTAAGGT
GCCGCAGATGCTTATTCAGCTGGTCCGTCATGGTGCTAAGGCTGATATCGATACCCGCAGCGGTATTGTCAGTGGGCAGG
TTATTCGAGTCGATCCCGTGGTCAGTCAAGGTGCAGTAAGAGTCGATATTCAACTGCTCGATGAGATATCGAGTGATATT
CGACCCATGCAGATGGTTGATGCGGTGATCTTCGGTAAGAGTCGCGCCCAGGTCAATTATGTCGATAAGCCCGCAGGCGC
TATCGAAGACAGATCCTTAGCGGTATTTAAGTTAGAAAGTGCTGAACGTGCTATCAAGGTGCAGGTGCAATTTGGCAAGG
CGGTAGGTAACAGCATAGAGATCATCTCCGGCCTACAAGCTAACGATAAAATTATCATATCTGCATTGGATATAGACACA
GATATTACCCAGCTGCAGCTGAGCCAATAA

Upstream 100 bases:

>100_bases
AATGCTAATGTGTGGACAAGTTTTAACCGCTTCATTACAAGTTTGGCTATCTGCTTAGGCTTGTGTTGCGTTTATACCTA
AGAAATTCATGGAGCGGTAA

Downstream 100 bases:

>100_bases
ACAAGGAATGTAAGATGAAAAAGGAAGTACTCAACATAAAGCAGATCTATAAGTCCTTTGCCGCCGGACAGGTGAAAACG
CCAGTGCTCAATGGTGTCTG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Efflux Transporter; Efflux Transporter MFP Component RND Family; ABC Transporter Permease; Efflux Transporter MFP Subunit; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; HlyD Family Secretion Protein; Efflux Transporter MFP Component RND Family Protein; Efflux Transporter Rnd Family Mfp Subunit; HlyD Family Transporter

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MKRTKGRIIYGAILMLSGALLISGWSIGFSGSRHYIDATSVMTAKVQSGEFTQRIRGYGTLMSQNQRLITASSLAVVDEI
KLHPGAEVSANSILLILKNPQLDSALQQAETNVHNSRTTKRKLMLEQQRELLDQASSLAEFKADAEIANLQVEAESPLAA
EGIISAMDMRLSRLRAKQLNERLKLGQDKLGKLREVHAEHLLIQTEIIKQAESELATAQNRREQLVVRAGIEGVLQRLPI
KLGQSVNVGDELALVGSLSPLIAEIKVPQMLIQLVRHGAKADIDTRSGIVSGQVIRVDPVVSQGAVRVDIQLLDEISSDI
RPMQMVDAVIFGKSRAQVNYVDKPAGAIEDRSLAVFKLESAERAIKVQVQFGKAVGNSIEIISGLQANDKIIISALDIDT
DITQLQLSQ

Sequences:

>Translated_409_residues
MKRTKGRIIYGAILMLSGALLISGWSIGFSGSRHYIDATSVMTAKVQSGEFTQRIRGYGTLMSQNQRLITASSLAVVDEI
KLHPGAEVSANSILLILKNPQLDSALQQAETNVHNSRTTKRKLMLEQQRELLDQASSLAEFKADAEIANLQVEAESPLAA
EGIISAMDMRLSRLRAKQLNERLKLGQDKLGKLREVHAEHLLIQTEIIKQAESELATAQNRREQLVVRAGIEGVLQRLPI
KLGQSVNVGDELALVGSLSPLIAEIKVPQMLIQLVRHGAKADIDTRSGIVSGQVIRVDPVVSQGAVRVDIQLLDEISSDI
RPMQMVDAVIFGKSRAQVNYVDKPAGAIEDRSLAVFKLESAERAIKVQVQFGKAVGNSIEIISGLQANDKIIISALDIDT
DITQLQLSQ
>Mature_409_residues
MKRTKGRIIYGAILMLSGALLISGWSIGFSGSRHYIDATSVMTAKVQSGEFTQRIRGYGTLMSQNQRLITASSLAVVDEI
KLHPGAEVSANSILLILKNPQLDSALQQAETNVHNSRTTKRKLMLEQQRELLDQASSLAEFKADAEIANLQVEAESPLAA
EGIISAMDMRLSRLRAKQLNERLKLGQDKLGKLREVHAEHLLIQTEIIKQAESELATAQNRREQLVVRAGIEGVLQRLPI
KLGQSVNVGDELALVGSLSPLIAEIKVPQMLIQLVRHGAKADIDTRSGIVSGQVIRVDPVVSQGAVRVDIQLLDEISSDI
RPMQMVDAVIFGKSRAQVNYVDKPAGAIEDRSLAVFKLESAERAIKVQVQFGKAVGNSIEIISGLQANDKIIISALDIDT
DITQLQLSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44638; Mature: 44638

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTKGRIIYGAILMLSGALLISGWSIGFSGSRHYIDATSVMTAKVQSGEFTQRIRGYGT
CCCCCCCCHHHHHHHHCCHHEEECEEECCCCCCEEEEHHHEEEEEECCCHHHHHHHHHHH
LMSQNQRLITASSLAVVDEIKLHPGAEVSANSILLILKNPQLDSALQQAETNVHNSRTTK
HHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHH
RKLMLEQQRELLDQASSLAEFKADAEIANLQVEAESPLAAEGIISAMDMRLSRLRAKQLN
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ERLKLGQDKLGKLREVHAEHLLIQTEIIKQAESELATAQNRREQLVVRAGIEGVLQRLPI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KLGQSVNVGDELALVGSLSPLIAEIKVPQMLIQLVRHGAKADIDTRSGIVSGQVIRVDPV
HHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
VSQGAVRVDIQLLDEISSDIRPMQMVDAVIFGKSRAQVNYVDKPAGAIEDRSLAVFKLES
CCCCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECC
AERAIKVQVQFGKAVGNSIEIISGLQANDKIIISALDIDTDITQLQLSQ
CCCEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEECC
>Mature Secondary Structure
MKRTKGRIIYGAILMLSGALLISGWSIGFSGSRHYIDATSVMTAKVQSGEFTQRIRGYGT
CCCCCCCCHHHHHHHHCCHHEEECEEECCCCCCEEEEHHHEEEEEECCCHHHHHHHHHHH
LMSQNQRLITASSLAVVDEIKLHPGAEVSANSILLILKNPQLDSALQQAETNVHNSRTTK
HHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHH
RKLMLEQQRELLDQASSLAEFKADAEIANLQVEAESPLAAEGIISAMDMRLSRLRAKQLN
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ERLKLGQDKLGKLREVHAEHLLIQTEIIKQAESELATAQNRREQLVVRAGIEGVLQRLPI
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KLGQSVNVGDELALVGSLSPLIAEIKVPQMLIQLVRHGAKADIDTRSGIVSGQVIRVDPV
HHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
VSQGAVRVDIQLLDEISSDIRPMQMVDAVIFGKSRAQVNYVDKPAGAIEDRSLAVFKLES
CCCCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECC
AERAIKVQVQFGKAVGNSIEIISGLQANDKIIISALDIDTDITQLQLSQ
CCCEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA