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The map label for this gene is atpC

Identifier: 167626198

GI number: 167626198

Start: 5205743

End: 5206171

Strand: Reverse

Name: atpC

Synonym: Shal_4293

Alternate gene names: 167626198

Gene position: 5206171-5205743 (Counterclockwise)

Preceding gene: 167626199

Following gene: 167626197

Centisome position: 99.6

GC content: 48.48

Gene sequence:

>429_bases
ATGGCAGCCATGACAGTACAGCTTGATATGGTAAGTGCAGAGAGCAATATCTTTTCTGGTCGAGTAGCTCAGCTACAAGT
ATCAGGTACTGAAGGTGAGCTAGGTATTATGCCTGGTCACGCCGCTCTGCTGACAAGTATCAAGCCTGGCATGGCGCGCA
TCGTCAAGCAAGATGGAAGTGAAGAAGTGTTTTATCTTTCAGGTGGTATCCTGGAAGTTCAACCTTCTTCAATTTCAGTA
TTGGCTGACGTCGTATTGCGTGCCGAAGAGATTGATGAGCAGGCAGCTGTAGAAGCTAAGCGTCGTGCAGAAGCCCATAT
GGCTAATGCTGGTGCAGACTTCAACTATGCAGCAGCAGCGATTGAGTTAGCTCAGGCTATCGCTCAGCTTCGCGTTGTCG
AGACCATCAAGAAGAACATTTCCCGCTAA

Upstream 100 bases:

>100_bases
CTTCCAGAGCAAGCGTTCTACATGGTTGGTTCAATCGACGAAGCTGTTGAGAAAGCTAACAAAAAATAACTAGGTCTTTG
ACTTAGTTTAAGGAGAACGG

Downstream 100 bases:

>100_bases
GGGATTGTTTGATGAAAAAAAGCGCCCTAGGGCGCTTTTTTTGTGTCTAAAAGAAGGTTAAAAGCAGGCCCTAGGAAAAG
CTAAGAAAGGTCCTAGGTGC

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAAMTVQLDMVSAESNIFSGRVAQLQVSGTEGELGIMPGHAALLTSIKPGMARIVKQDGSEEVFYLSGGILEVQPSSISV
LADVVLRAEEIDEQAAVEAKRRAEAHMANAGADFNYAAAAIELAQAIAQLRVVETIKKNISR

Sequences:

>Translated_142_residues
MAAMTVQLDMVSAESNIFSGRVAQLQVSGTEGELGIMPGHAALLTSIKPGMARIVKQDGSEEVFYLSGGILEVQPSSISV
LADVVLRAEEIDEQAAVEAKRRAEAHMANAGADFNYAAAAIELAQAIAQLRVVETIKKNISR
>Mature_141_residues
AAMTVQLDMVSAESNIFSGRVAQLQVSGTEGELGIMPGHAALLTSIKPGMARIVKQDGSEEVFYLSGGILEVQPSSISVL
ADVVLRAEEIDEQAAVEAKRRAEAHMANAGADFNYAAAAIELAQAIAQLRVVETIKKNISR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=136, Percent_Identity=62.5, Blast_Score=178, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_SHEHH (B0TQF3)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001676492.1
- ProteinModelPortal:   B0TQF3
- SMR:   B0TQF3
- GeneID:   5905181
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_4293
- HOGENOM:   HBG663981
- OMA:   MAMTVHC
- ProtClustDB:   PRK00571
- BioCyc:   SHAL458817:SHAL_4293-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15025; Mature: 14894

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAMTVQLDMVSAESNIFSGRVAQLQVSGTEGELGIMPGHAALLTSIKPGMARIVKQDGS
CCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHCCHHHHHHHHCCCC
EEVFYLSGGILEVQPSSISVLADVVLRAEEIDEQAAVEAKRRAEAHMANAGADFNYAAAA
CEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IELAQAIAQLRVVETIKKNISR
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAMTVQLDMVSAESNIFSGRVAQLQVSGTEGELGIMPGHAALLTSIKPGMARIVKQDGS
CEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHCCHHHHHHHHCCCC
EEVFYLSGGILEVQPSSISVLADVVLRAEEIDEQAAVEAKRRAEAHMANAGADFNYAAAA
CEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IELAQAIAQLRVVETIKKNISR
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA