Click here to switch to the map view.

The map label for this gene is 167626151

Identifier: 167626151

GI number: 167626151

Start: 5152575

End: 5153321

Strand: Reverse

Name: 167626151

Synonym: Shal_4246

Alternate gene names: NA

Gene position: 5153321-5152575 (Counterclockwise)

Preceding gene: 167626164

Following gene: 167626150

Centisome position: 98.59

GC content: 51.27

Gene sequence:

>747_bases
ATGGTTTGCATAAATTTGTGGCACAAGATCGGAACCTGTGTTTCCTGCTTCCTCCTCAGTGTTTCCTGTTTACTTCCGCA
GCAGAGTCTGGCGCAAGATTCGATGACAGCCCCTAAGCAGATTGAGCAAGCATTTACTCAGTTGTTATCAGAAGAATTAG
GTCAGTGGCAGCAACAAGCCGGGCTAACCCAGCTAGATTCTGCTATTGAGATCAAGCTGCCATCGGGGGCAAAGAGGCTC
GAACTTTGCCCTTCGAAAGTCAGCATCGATGCGGGCTCTGGTATTCCCTTGGGCAATGTGCAGCGTAAGGTGAGTTGTGA
TGCTCAGGGCTGGAGCCTCTACGTTCGAGCTTCGGTAAGTGTCAGTGTTAAAATTCCTGTCGCTAATCGTGTGCTTAAAC
GTGGTGAGCATATCTTGGCCGCGGATATTGATTGGAAAGTCGTTAAATTGCGCCCGTCAGATAGAGACTTAGTGACGGGG
CTCGATGAGATAGTGGGTCGACAGGTGGTGCGTAAGGTACGGCGTTATCAAGCAATTAAAGCTGTGCAACTGAGTGCGCC
GCAGTGGGTGAATATTGGTGACCGAGTCATTATCGAAGCCCGCAGCAATGGATTCTACGCTAATATGCCCGGTGAAGCGC
TCGAAGGGGGCGGAGAGGGCGTGGCGATACGCGTCAGGAACCTAAGCTCTGGTAAAGTGATCAGCGCTTATCCGATCGCC
AAAGGGCGGGTAGAGACGCAGTTTTAA

Upstream 100 bases:

>100_bases
CAAGGTTGATAGCCATTACGACTCCTAGTATGGTATGTCCAGTTTTATTGCTGCTTGACTATTCAATTAGTGTGCCAATA
GTTTTAAATGAGGTTTTTCA

Downstream 100 bases:

>100_bases
GCCCTTAGCGGCAGCGAAAAGAGATTTAATTAATCACGGTGCTATTTCAGAATGGACTCTATGGTGTCGCTTTACTTCCT
ATAGTAGGCGTATTTGAGGC

Product: SAF domain-containing protein

Products: NA

Alternate protein names: SAF Domain-Containing Protein; Flagella Basal Body P-Ring Formation Protein FlgA; Flageller Protein FlgA; Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellar Basal-Body P-Ring Formation Protein FlgA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MVCINLWHKIGTCVSCFLLSVSCLLPQQSLAQDSMTAPKQIEQAFTQLLSEELGQWQQQAGLTQLDSAIEIKLPSGAKRL
ELCPSKVSIDAGSGIPLGNVQRKVSCDAQGWSLYVRASVSVSVKIPVANRVLKRGEHILAADIDWKVVKLRPSDRDLVTG
LDEIVGRQVVRKVRRYQAIKAVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVRNLSSGKVISAYPIA
KGRVETQF

Sequences:

>Translated_248_residues
MVCINLWHKIGTCVSCFLLSVSCLLPQQSLAQDSMTAPKQIEQAFTQLLSEELGQWQQQAGLTQLDSAIEIKLPSGAKRL
ELCPSKVSIDAGSGIPLGNVQRKVSCDAQGWSLYVRASVSVSVKIPVANRVLKRGEHILAADIDWKVVKLRPSDRDLVTG
LDEIVGRQVVRKVRRYQAIKAVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVRNLSSGKVISAYPIA
KGRVETQF
>Mature_248_residues
MVCINLWHKIGTCVSCFLLSVSCLLPQQSLAQDSMTAPKQIEQAFTQLLSEELGQWQQQAGLTQLDSAIEIKLPSGAKRL
ELCPSKVSIDAGSGIPLGNVQRKVSCDAQGWSLYVRASVSVSVKIPVANRVLKRGEHILAADIDWKVVKLRPSDRDLVTG
LDEIVGRQVVRKVRRYQAIKAVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVRNLSSGKVISAYPIA
KGRVETQF

Specific function: Unknown

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27034; Mature: 27034

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCINLWHKIGTCVSCFLLSVSCLLPQQSLAQDSMTAPKQIEQAFTQLLSEELGQWQQQA
CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
GLTQLDSAIEIKLPSGAKRLELCPSKVSIDAGSGIPLGNVQRKVSCDAQGWSLYVRASVS
CHHHCCCEEEEECCCCCCHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEEE
VSVKIPVANRVLKRGEHILAADIDWKVVKLRPSDRDLVTGLDEIVGRQVVRKVRRYQAIK
EEEEECHHHHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVRNLSSGKVISAYPIA
HEEECCCCEECCCCEEEEEECCCCEEECCCCHHHCCCCCEEEEEEEECCCCCEEEEECCC
KGRVETQF
CCEECCCC
>Mature Secondary Structure
MVCINLWHKIGTCVSCFLLSVSCLLPQQSLAQDSMTAPKQIEQAFTQLLSEELGQWQQQA
CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
GLTQLDSAIEIKLPSGAKRLELCPSKVSIDAGSGIPLGNVQRKVSCDAQGWSLYVRASVS
CHHHCCCEEEEECCCCCCHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCEEEEEEEEEE
VSVKIPVANRVLKRGEHILAADIDWKVVKLRPSDRDLVTGLDEIVGRQVVRKVRRYQAIK
EEEEECHHHHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVQLSAPQWVNIGDRVIIEARSNGFYANMPGEALEGGGEGVAIRVRNLSSGKVISAYPIA
HEEECCCCEECCCCEEEEEECCCCEEECCCCHHHCCCCCEEEEEEEECCCCCEEEEECCC
KGRVETQF
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA