| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fliB [H]
Identifier: 167626164
GI number: 167626164
Start: 5163452
End: 5164627
Strand: Reverse
Name: fliB [H]
Synonym: Shal_4259
Alternate gene names: 167626164
Gene position: 5164627-5163452 (Counterclockwise)
Preceding gene: 167626176
Following gene: 167626151
Centisome position: 98.81
GC content: 43.62
Gene sequence:
>1176_bases ATGAAGCATTCACTCATTAGACCCGGTTTCGTCACTAACTTCAGCTGTATTGGCGGCGAGTGTGAAGATAGTTGTTGTTA CGGTTGGAATATCCATATTGATAAGCAAAGTTACAAAAAAACATTAGCGCATAGCGAGCTGAAGGTTTTGGCTAAAACCG CCTTGAAGAAGGTCAAAAAGAGTGAGCAGGTGTGGGCGCAGGCAGTCCTAAATGAAGAGGGAGCCTGTGGCTTTTTAGAT GAGAATAAGCTTTGTCAAATTCACGCTAAGGCTGGAGAAGCTCTACTGAGTAACACTTGCAAGACCTACCCAAGAATGTC ACATATGAGGGGGGGAGATCGTTATGACAGTCTGTCATTATCTTGTCCTGAGGCGGCGAGAAATATTCTGCTTAGACCCG ATGCGTTTAACTTGCAGCGTACTGAAATTGGGCACAGCCGTAGCTATAAGGCAGCCCCGCTTTGGGCGCAAAAAGCCTAT GACTATTCGATTCAGTTACTGCTAAAACCTGAACAACCGCTGGAACTAGGTCTTACCGCTATCGGTATTTTGATGAACAC TGTCGATAGAGCGGCTAAAGGAGAAGTTGAAAGTAGTGCCATCGATAGTATGTTTCAGCAGCTGATTGTCTTAAGTGATA ACGGCCAGCTTAAGCAGCATTTTGAGGGGTTTAATCAAGATACTGACGTACACCAAATGCATGCATTTACCTCTATTCAG TTATGGCTAAATACTAATAAAGTGAGGCGTGGCCGGAGTCGATTTGAGCTAATAAACCAAGCTATTTGCTCAATGGCGGA TGATGATAAAAACATTAGCATGAGCAGCATTAATCAGGCTTGGAAAGAGATTGCCGAACCTACATTAGGTGGCCATCAAG AGTTATTCAGTCGTTATCTGCTTTACTATTTTTACCACATGAACTTCCCTCAAGTCGATAAGCTCACACCATCGCAGGCC TTTAGAGTGATGCTGTTGGATTTCTTTATGTTGCGTTGTTATTTAGCCGTGATAGCCGCTAAAAATAATGGGCTGTCTGA GCACGATATCATTATGTGTTTTCAGGTGTATCACACCAATCGGCAGCATAAGGCTAACTACAGCCAATTCGCCGTTGATT TGCTAGATAAAGCGAAGTTTACAGATTTGGCCGCTATTTTGACCTTGCTGTCCTAG
Upstream 100 bases:
>100_bases ATGGGTAATGACAAGGGAGGACTTTAGTTAATTGCTATTTTGGTCGCTTTCTATAGACATATCTAGGCTTGGCCAAAACT TGATTACAAAGAGAGCGAGA
Downstream 100 bases:
>100_bases AGGTGAAGGCGGGGACTCCCGCCTTTTTTAGGCATATTTATGCTAGTAGGGCGGAGATCTGTGGCCGAGTGAAATTTGCT TGAGCCATTAATGAAGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Lysine N-methyltransferase [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKKSEQVWAQAVLNEEGACGFLD ENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSLSCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAY DYSIQLLLKPEQPLELGLTAIGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYLLYYFYHMNFPQVDKLTPSQA FRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTNRQHKANYSQFAVDLLDKAKFTDLAAILTLLS
Sequences:
>Translated_391_residues MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKKSEQVWAQAVLNEEGACGFLD ENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSLSCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAY DYSIQLLLKPEQPLELGLTAIGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYLLYYFYHMNFPQVDKLTPSQA FRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTNRQHKANYSQFAVDLLDKAKFTDLAAILTLLS >Mature_391_residues MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKKSEQVWAQAVLNEEGACGFLD ENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSLSCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAY DYSIQLLLKPEQPLELGLTAIGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYLLYYFYHMNFPQVDKLTPSQA FRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTNRQHKANYSQFAVDLLDKAKFTDLAAILTLLS
Specific function: Post-translationally modifies flagellin by methylation of epsilon amino group of surface-exposed lysine residues [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020193 - ProDom: PD035357 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44411; Mature: 44411
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKK CCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH SEQVWAQAVLNEEGACGFLDENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSL HHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC SCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAYDYSIQLLLKPEQPLELGLTA CCCHHHCCEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHH IGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHHEEEE LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYL EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH LYYFYHMNFPQVDKLTPSQAFRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTN HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEHHCC RQHKANYSQFAVDLLDKAKFTDLAAILTLLS CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKK CCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH SEQVWAQAVLNEEGACGFLDENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSL HHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC SCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAYDYSIQLLLKPEQPLELGLTA CCCHHHCCEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHH IGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHHEEEE LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYL EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH LYYFYHMNFPQVDKLTPSQAFRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTN HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEHHCC RQHKANYSQFAVDLLDKAKFTDLAAILTLLS CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11142406 [H]