Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is fliB [H]

Identifier: 167626164

GI number: 167626164

Start: 5163452

End: 5164627

Strand: Reverse

Name: fliB [H]

Synonym: Shal_4259

Alternate gene names: 167626164

Gene position: 5164627-5163452 (Counterclockwise)

Preceding gene: 167626176

Following gene: 167626151

Centisome position: 98.81

GC content: 43.62

Gene sequence:

>1176_bases
ATGAAGCATTCACTCATTAGACCCGGTTTCGTCACTAACTTCAGCTGTATTGGCGGCGAGTGTGAAGATAGTTGTTGTTA
CGGTTGGAATATCCATATTGATAAGCAAAGTTACAAAAAAACATTAGCGCATAGCGAGCTGAAGGTTTTGGCTAAAACCG
CCTTGAAGAAGGTCAAAAAGAGTGAGCAGGTGTGGGCGCAGGCAGTCCTAAATGAAGAGGGAGCCTGTGGCTTTTTAGAT
GAGAATAAGCTTTGTCAAATTCACGCTAAGGCTGGAGAAGCTCTACTGAGTAACACTTGCAAGACCTACCCAAGAATGTC
ACATATGAGGGGGGGAGATCGTTATGACAGTCTGTCATTATCTTGTCCTGAGGCGGCGAGAAATATTCTGCTTAGACCCG
ATGCGTTTAACTTGCAGCGTACTGAAATTGGGCACAGCCGTAGCTATAAGGCAGCCCCGCTTTGGGCGCAAAAAGCCTAT
GACTATTCGATTCAGTTACTGCTAAAACCTGAACAACCGCTGGAACTAGGTCTTACCGCTATCGGTATTTTGATGAACAC
TGTCGATAGAGCGGCTAAAGGAGAAGTTGAAAGTAGTGCCATCGATAGTATGTTTCAGCAGCTGATTGTCTTAAGTGATA
ACGGCCAGCTTAAGCAGCATTTTGAGGGGTTTAATCAAGATACTGACGTACACCAAATGCATGCATTTACCTCTATTCAG
TTATGGCTAAATACTAATAAAGTGAGGCGTGGCCGGAGTCGATTTGAGCTAATAAACCAAGCTATTTGCTCAATGGCGGA
TGATGATAAAAACATTAGCATGAGCAGCATTAATCAGGCTTGGAAAGAGATTGCCGAACCTACATTAGGTGGCCATCAAG
AGTTATTCAGTCGTTATCTGCTTTACTATTTTTACCACATGAACTTCCCTCAAGTCGATAAGCTCACACCATCGCAGGCC
TTTAGAGTGATGCTGTTGGATTTCTTTATGTTGCGTTGTTATTTAGCCGTGATAGCCGCTAAAAATAATGGGCTGTCTGA
GCACGATATCATTATGTGTTTTCAGGTGTATCACACCAATCGGCAGCATAAGGCTAACTACAGCCAATTCGCCGTTGATT
TGCTAGATAAAGCGAAGTTTACAGATTTGGCCGCTATTTTGACCTTGCTGTCCTAG

Upstream 100 bases:

>100_bases
ATGGGTAATGACAAGGGAGGACTTTAGTTAATTGCTATTTTGGTCGCTTTCTATAGACATATCTAGGCTTGGCCAAAACT
TGATTACAAAGAGAGCGAGA

Downstream 100 bases:

>100_bases
AGGTGAAGGCGGGGACTCCCGCCTTTTTTAGGCATATTTATGCTAGTAGGGCGGAGATCTGTGGCCGAGTGAAATTTGCT
TGAGCCATTAATGAAGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Lysine N-methyltransferase [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKKSEQVWAQAVLNEEGACGFLD
ENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSLSCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAY
DYSIQLLLKPEQPLELGLTAIGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ
LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYLLYYFYHMNFPQVDKLTPSQA
FRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTNRQHKANYSQFAVDLLDKAKFTDLAAILTLLS

Sequences:

>Translated_391_residues
MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKKSEQVWAQAVLNEEGACGFLD
ENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSLSCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAY
DYSIQLLLKPEQPLELGLTAIGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ
LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYLLYYFYHMNFPQVDKLTPSQA
FRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTNRQHKANYSQFAVDLLDKAKFTDLAAILTLLS
>Mature_391_residues
MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKKSEQVWAQAVLNEEGACGFLD
ENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSLSCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAY
DYSIQLLLKPEQPLELGLTAIGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ
LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYLLYYFYHMNFPQVDKLTPSQA
FRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTNRQHKANYSQFAVDLLDKAKFTDLAAILTLLS

Specific function: Post-translationally modifies flagellin by methylation of epsilon amino group of surface-exposed lysine residues [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020193
- ProDom:   PD035357 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44411; Mature: 44411

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKK
CCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
SEQVWAQAVLNEEGACGFLDENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSL
HHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
SCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAYDYSIQLLLKPEQPLELGLTA
CCCHHHCCEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHH
IGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHHEEEE
LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYL
EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
LYYFYHMNFPQVDKLTPSQAFRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTN
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEHHCC
RQHKANYSQFAVDLLDKAKFTDLAAILTLLS
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKHSLIRPGFVTNFSCIGGECEDSCCYGWNIHIDKQSYKKTLAHSELKVLAKTALKKVKK
CCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
SEQVWAQAVLNEEGACGFLDENKLCQIHAKAGEALLSNTCKTYPRMSHMRGGDRYDSLSL
HHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
SCPEAARNILLRPDAFNLQRTEIGHSRSYKAAPLWAQKAYDYSIQLLLKPEQPLELGLTA
CCCHHHCCEEECCCCCCCCHHHCCCCCCCCCCCCHHHHCCCEEEEEEECCCCCHHHHHHH
IGILMNTVDRAAKGEVESSAIDSMFQQLIVLSDNGQLKQHFEGFNQDTDVHQMHAFTSIQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHHEEEE
LWLNTNKVRRGRSRFELINQAICSMADDDKNISMSSINQAWKEIAEPTLGGHQELFSRYL
EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
LYYFYHMNFPQVDKLTPSQAFRVMLLDFFMLRCYLAVIAAKNNGLSEHDIIMCFQVYHTN
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEHHCC
RQHKANYSQFAVDLLDKAKFTDLAAILTLLS
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11142406 [H]