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The map label for this gene is 167626140

Identifier: 167626140

GI number: 167626140

Start: 5142323

End: 5143204

Strand: Reverse

Name: 167626140

Synonym: Shal_4235

Alternate gene names: NA

Gene position: 5143204-5142323 (Counterclockwise)

Preceding gene: 167626149

Following gene: 167626139

Centisome position: 98.4

GC content: 45.35

Gene sequence:

>882_bases
ATGAAAACAACCGCGAAAGCAAGCTTAATAAAATCTAGCCAAGGAGTAGATGTTAGACCTGTGGCTTTGATAAAAGAAAA
GCTGGCTAGAAGTCGATTATTAATGCAGTTGGAGTCATGCCGACGACCAATAATGGATGCTGTTAATGAATTATTGACCC
CAATAACTCGGCAGGGACATTACGGACTGTCAAAAGTATCGCTCAGCGCAAAAGCCAATGTCGTCACCCCTCAATTACAT
CATGCTTGGTTTTTGCTGAGTTATAACCGTATCGATTTGGGTTGGTGGTTAATAGATAAGTGCACCTTGGACCAGCTTGC
CAGTGGCTATTATGGTAGCTGCTCTAGTGCGCTGCAGTCTCCAATGAGAGCCCCGAGTCAGTCAGAGTATCGCTTGGTCA
AACGTTTGATGATGGCGGTGATAAGAACACTGCCGGTAACCGAGATAGATGAAGATAAATTGGAACTAGAATTGGTGATG
AATACTACACCGATTAAAGCTCCGGTGTGTTGTGAATTAGCTTTCCCAGCAGCCCATGCTGGACCTGCTCTCTGCTTTTA
TATGGCAGAGCATCTATTGGAATTGATGGCTGAGCAGCCAAGCCAATATCAGGCTGACCCTGAGTTATCTTTAAAGTTGG
CACATAGACTCAAACAGATCCCATTGAGAACCCTACTCGAATTAGGGCATCAGAGTATGCCAGTTACTTCACTGCAGAGT
TTGGCTGTTGGCGATATTTTGCCGATGAATCTGCATTCTCGCTGCCCTGTTACCGTGGGTAAACGTCCACTTTTTTACGC
CACAGTTCATACCCATGAGGGACAGATGGTGGCCAAATTGACCCAAGAAGCCTTTCAAATGGAGGAACAATCCAATGGCT
GA

Upstream 100 bases:

>100_bases
AAATGAGTTTTTATTTAGCCATTATTTTGTCGAGCGTCATTTAAATAGCGCTTTTACTTTTGCGTCGATTATTTGACGTT
CTTTTGTTGTGGAATTTAGG

Downstream 100 bases:

>100_bases
ACATAATATTCTACAAGATGAAGACTTTTTACTCGATGATGACTTTTTTGCTGAAGAGCAGAGCCACAAACCAAAGGTTC
AGGCTAAGCCAGTAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKTTAKASLIKSSQGVDVRPVALIKEKLARSRLLMQLESCRRPIMDAVNELLTPITRQGHYGLSKVSLSAKANVVTPQLH
HAWFLLSYNRIDLGWWLIDKCTLDQLASGYYGSCSSALQSPMRAPSQSEYRLVKRLMMAVIRTLPVTEIDEDKLELELVM
NTTPIKAPVCCELAFPAAHAGPALCFYMAEHLLELMAEQPSQYQADPELSLKLAHRLKQIPLRTLLELGHQSMPVTSLQS
LAVGDILPMNLHSRCPVTVGKRPLFYATVHTHEGQMVAKLTQEAFQMEEQSNG

Sequences:

>Translated_293_residues
MKTTAKASLIKSSQGVDVRPVALIKEKLARSRLLMQLESCRRPIMDAVNELLTPITRQGHYGLSKVSLSAKANVVTPQLH
HAWFLLSYNRIDLGWWLIDKCTLDQLASGYYGSCSSALQSPMRAPSQSEYRLVKRLMMAVIRTLPVTEIDEDKLELELVM
NTTPIKAPVCCELAFPAAHAGPALCFYMAEHLLELMAEQPSQYQADPELSLKLAHRLKQIPLRTLLELGHQSMPVTSLQS
LAVGDILPMNLHSRCPVTVGKRPLFYATVHTHEGQMVAKLTQEAFQMEEQSNG
>Mature_293_residues
MKTTAKASLIKSSQGVDVRPVALIKEKLARSRLLMQLESCRRPIMDAVNELLTPITRQGHYGLSKVSLSAKANVVTPQLH
HAWFLLSYNRIDLGWWLIDKCTLDQLASGYYGSCSSALQSPMRAPSQSEYRLVKRLMMAVIRTLPVTEIDEDKLELELVM
NTTPIKAPVCCELAFPAAHAGPALCFYMAEHLLELMAEQPSQYQADPELSLKLAHRLKQIPLRTLLELGHQSMPVTSLQS
LAVGDILPMNLHSRCPVTVGKRPLFYATVHTHEGQMVAKLTQEAFQMEEQSNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32702; Mature: 32702

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTAKASLIKSSQGVDVRPVALIKEKLARSRLLMQLESCRRPIMDAVNELLTPITRQGH
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGLSKVSLSAKANVVTPQLHHAWFLLSYNRIDLGWWLIDKCTLDQLASGYYGSCSSALQS
CCCHHEEECCCCCCCCCHHHHEEEEEEECEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHH
PMRAPSQSEYRLVKRLMMAVIRTLPVTEIDEDKLELELVMNTTPIKAPVCCELAFPAAHA
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCC
GPALCFYMAEHLLELMAEQPSQYQADPELSLKLAHRLKQIPLRTLLELGHQSMPVTSLQS
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
LAVGDILPMNLHSRCPVTVGKRPLFYATVHTHEGQMVAKLTQEAFQMEEQSNG
HHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTTAKASLIKSSQGVDVRPVALIKEKLARSRLLMQLESCRRPIMDAVNELLTPITRQGH
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGLSKVSLSAKANVVTPQLHHAWFLLSYNRIDLGWWLIDKCTLDQLASGYYGSCSSALQS
CCCHHEEECCCCCCCCCHHHHEEEEEEECEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHH
PMRAPSQSEYRLVKRLMMAVIRTLPVTEIDEDKLELELVMNTTPIKAPVCCELAFPAAHA
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCC
GPALCFYMAEHLLELMAEQPSQYQADPELSLKLAHRLKQIPLRTLLELGHQSMPVTSLQS
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
LAVGDILPMNLHSRCPVTVGKRPLFYATVHTHEGQMVAKLTQEAFQMEEQSNG
HHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA