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The map label for this gene is 167626104

Identifier: 167626104

GI number: 167626104

Start: 5103286

End: 5103570

Strand: Reverse

Name: 167626104

Synonym: Shal_4199

Alternate gene names: NA

Gene position: 5103570-5103286 (Counterclockwise)

Preceding gene: 167626105

Following gene: 167626103

Centisome position: 97.64

GC content: 49.12

Gene sequence:

>285_bases
ATGAAATCGACTAAAACAGCTGTAGGTGTAACCGTCGCAGGTATTCTTGCCGCCAGCCTTTCTCTGGGAGCACAAGCTGT
ACCTGAACAGCCCAAAGAATGGGAAAAATGTGCTGGTGTAGCCAAAGCCGGTGCTAACGATTGTGGAGCTTTAGATGGTA
GCCATGGCTGCGCAGGCCAGGCTAAAGAAGACAATATGCCTACCGAGTGGATCTATGTGCCAGCAGGAACTTGCGACAAG
ATAACAGGTGGTGAAGTTAAAGCTGTTAAACCGGCCAAAAGTTAG

Upstream 100 bases:

>100_bases
TTTTATTGGACTAGAATTAATTTTGATCATGGTGCAATCAATAACGATTTTGATTCGTTATAGATATTGAACATCTTATT
AATCAAAAGGACATTCTGAT

Downstream 100 bases:

>100_bases
TGCTTTCATCAAGTATTGCGGGCGCGGGCATAGGTTTGCGTATTCCCCATGTTCAGCAGTTATTGGCCGATGAGGCCATT
AAAATACCTTGGCTTGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKSTKTAVGVTVAGILAASLSLGAQAVPEQPKEWEKCAGVAKAGANDCGALDGSHGCAGQAKEDNMPTEWIYVPAGTCDK
ITGGEVKAVKPAKS

Sequences:

>Translated_94_residues
MKSTKTAVGVTVAGILAASLSLGAQAVPEQPKEWEKCAGVAKAGANDCGALDGSHGCAGQAKEDNMPTEWIYVPAGTCDK
ITGGEVKAVKPAKS
>Mature_94_residues
MKSTKTAVGVTVAGILAASLSLGAQAVPEQPKEWEKCAGVAKAGANDCGALDGSHGCAGQAKEDNMPTEWIYVPAGTCDK
ITGGEVKAVKPAKS

Specific function: Unknown

COG id: COG5572

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9430; Mature: 9430

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTKTAVGVTVAGILAASLSLGAQAVPEQPKEWEKCAGVAKAGANDCGALDGSHGCAGQ
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
AKEDNMPTEWIYVPAGTCDKITGGEVKAVKPAKS
CCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MKSTKTAVGVTVAGILAASLSLGAQAVPEQPKEWEKCAGVAKAGANDCGALDGSHGCAGQ
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
AKEDNMPTEWIYVPAGTCDKITGGEVKAVKPAKS
CCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA