The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623809

Identifier: 167623809

GI number: 167623809

Start: 2255307

End: 2256353

Strand: Direct

Name: 167623809

Synonym: Shal_1879

Alternate gene names: NA

Gene position: 2255307-2256353 (Clockwise)

Preceding gene: 167623808

Following gene: 167623810

Centisome position: 43.15

GC content: 43.65

Gene sequence:

>1047_bases
ATGCTGCTCATTACTTCCGCAAGAAGAACTCTAATCGATGCTGAAACAACGCCTTTCTATCACATCATAAACCGCTGCGT
AAGAAGAGCTTATCTCTGCGGTGAAGATAAAGTCACGGGGAAAAGTTTTGAGCATAGACGAGGTTGGATTGTCGATAAAA
TCAAAGCGCTTTCAAACATTTTTTGTATTGATATCTGCGCCTATGCAGTAATGAATAACCACTACCATTTAGTCCTTAAG
ATTGACATCGATAAAGCTAAGCCATTGAGTAACCGTGAAATCATTACCCGGTGGTGTCAGATCACTAAGGGGCATGCTGT
AGCGACTAAGTATTTGAATGGCAATACCTTGATTGAAGGTGAACGTTTACTCCTCGATGGTTTACTTACAGAGTGGCACG
AGCGTTTATCGAGTATCTCTTGGTTTATGAGGTGTCTTAATGAAGACATTGCCCGCAGGGCTAATCGCGAAGATGAGTGT
AAAGGGGCTTTCTGGGAGGGACGTTTCAAATCTCAGGCGCTACTTGATGAACAAGCACTGTTAGCCTGCATGATGTATGT
GGATTTAAACCCTATTAGAGCGGGGATTGCCGGTACGGTACAAACTTCTGACTTTACTTCAATTCAAGAGCGTATTACTG
AACTTAACACCGCCAAAACAGGCTCGGAATCATCAGTAAACCTCTCTGAACGTTCAACTGAAGAGCCATTAAAACCCCTC
GCCCTATTTGATGGTTCAAGCCACCTTGCCACTCAATCAGAGGCTCCATCAGGTATTCCATTTCATTTCTGTGATTATCT
GGAGCTTATCGATTGGACTGGTAGGGCTATCAGACCGAATAAAACAGGTTATATCGACTCAAGCCAACCTAAGCTGCTCA
ATGAACTTGGCATACCTGCTGATGCGTGGATAACTTCAGCCAAAGCATTTCGGCGTCAATACAGTGGTATTAGTGGTCGT
TGGGATGCGATGTGTGAGTTTAAAAGGCAGCATCAAAGCGGAAAGTGGTGTAAAGGAAAATCCTATAGCAATGCATTGCA
CCCATAG

Upstream 100 bases:

>100_bases
AGATAGGACAGCTAAAAAGATAGGACAGCCATATCTTTTTGTACTTTAGACCATCCTCTACTAGGCTTTTAGTTATCTGA
TTTGCACTGCTTAGTTAAGG

Downstream 100 bases:

>100_bases
CCCTGAATCGCATTGGCTAAAAGGGATAGAAAAGTCGGATCGAATTAAGGGTTCTGAATAAATCAAGAAACTTTTCTAAT
CAATGCTAGGTTGATTAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MLLITSARRTLIDAETTPFYHIINRCVRRAYLCGEDKVTGKSFEHRRGWIVDKIKALSNIFCIDICAYAVMNNHYHLVLK
IDIDKAKPLSNREIITRWCQITKGHAVATKYLNGNTLIEGERLLLDGLLTEWHERLSSISWFMRCLNEDIARRANREDEC
KGAFWEGRFKSQALLDEQALLACMMYVDLNPIRAGIAGTVQTSDFTSIQERITELNTAKTGSESSVNLSERSTEEPLKPL
ALFDGSSHLATQSEAPSGIPFHFCDYLELIDWTGRAIRPNKTGYIDSSQPKLLNELGIPADAWITSAKAFRRQYSGISGR
WDAMCEFKRQHQSGKWCKGKSYSNALHP

Sequences:

>Translated_348_residues
MLLITSARRTLIDAETTPFYHIINRCVRRAYLCGEDKVTGKSFEHRRGWIVDKIKALSNIFCIDICAYAVMNNHYHLVLK
IDIDKAKPLSNREIITRWCQITKGHAVATKYLNGNTLIEGERLLLDGLLTEWHERLSSISWFMRCLNEDIARRANREDEC
KGAFWEGRFKSQALLDEQALLACMMYVDLNPIRAGIAGTVQTSDFTSIQERITELNTAKTGSESSVNLSERSTEEPLKPL
ALFDGSSHLATQSEAPSGIPFHFCDYLELIDWTGRAIRPNKTGYIDSSQPKLLNELGIPADAWITSAKAFRRQYSGISGR
WDAMCEFKRQHQSGKWCKGKSYSNALHP
>Mature_348_residues
MLLITSARRTLIDAETTPFYHIINRCVRRAYLCGEDKVTGKSFEHRRGWIVDKIKALSNIFCIDICAYAVMNNHYHLVLK
IDIDKAKPLSNREIITRWCQITKGHAVATKYLNGNTLIEGERLLLDGLLTEWHERLSSISWFMRCLNEDIARRANREDEC
KGAFWEGRFKSQALLDEQALLACMMYVDLNPIRAGIAGTVQTSDFTSIQERITELNTAKTGSESSVNLSERSTEEPLKPL
ALFDGSSHLATQSEAPSGIPFHFCDYLELIDWTGRAIRPNKTGYIDSSQPKLLNELGIPADAWITSAKAFRRQYSGISGR
WDAMCEFKRQHQSGKWCKGKSYSNALHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39527; Mature: 39527

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLITSARRTLIDAETTPFYHIINRCVRRAYLCGEDKVTGKSFEHRRGWIVDKIKALSNI
CEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHH
FCIDICAYAVMNNHYHLVLKIDIDKAKPLSNREIITRWCQITKGHAVATKYLNGNTLIEG
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECC
ERLLLDGLLTEWHERLSSISWFMRCLNEDIARRANREDECKGAFWEGRFKSQALLDEQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHH
LACMMYVDLNPIRAGIAGTVQTSDFTSIQERITELNTAKTGSESSVNLSERSTEEPLKPL
HHHHHHHCCCHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCE
ALFDGSSHLATQSEAPSGIPFHFCDYLELIDWTGRAIRPNKTGYIDSSQPKLLNELGIPA
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
DAWITSAKAFRRQYSGISGRWDAMCEFKRQHQSGKWCKGKSYSNALHP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLITSARRTLIDAETTPFYHIINRCVRRAYLCGEDKVTGKSFEHRRGWIVDKIKALSNI
CEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHH
FCIDICAYAVMNNHYHLVLKIDIDKAKPLSNREIITRWCQITKGHAVATKYLNGNTLIEG
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECC
ERLLLDGLLTEWHERLSSISWFMRCLNEDIARRANREDECKGAFWEGRFKSQALLDEQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHH
LACMMYVDLNPIRAGIAGTVQTSDFTSIQERITELNTAKTGSESSVNLSERSTEEPLKPL
HHHHHHHCCCHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCE
ALFDGSSHLATQSEAPSGIPFHFCDYLELIDWTGRAIRPNKTGYIDSSQPKLLNELGIPA
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
DAWITSAKAFRRQYSGISGRWDAMCEFKRQHQSGKWCKGKSYSNALHP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA