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The map label for this gene is yeiE [H]

Identifier: 167623803

GI number: 167623803

Start: 2246805

End: 2247701

Strand: Direct

Name: yeiE [H]

Synonym: Shal_1873

Alternate gene names: 167623803

Gene position: 2246805-2247701 (Clockwise)

Preceding gene: 167623802

Following gene: 167623805

Centisome position: 42.99

GC content: 43.48

Gene sequence:

>897_bases
ATGCGTATAACATTAAAACAGTTGGCCATTTTTGAAGCGGTTGCTCGAAGTGGACAAGTTGCAAAAGCTGCTGAGATGGT
CAATTTGTCATCTCCAGCAGCATCGATGGCACTGTCTGAGCTAGAGAAACAGTTTGATACCCGCCTATTTGAGCGGTTCG
GTAATCGCTTACGCTTAAACTCTCAGGGCAGCTTACTGTTACCCTTAGCCACTGAAGCGCTGCAAAAAATTAATCAAATT
GAACATACATTTTCGCCGGCAGGGGCAGAGTTAGGCGGTAACCTGAATGTTAGCGCCAGTTCGACGATCGGTAATTATCT
ATTGGCGAGGAGTGCGGTAGCATTTTGTCAGCAACATACCAATACATTAGTTAATGTTCATATCGATAACAGTCAGGCGG
TGATTAATGCTGTGCTGGAGTTTCGAAGTGAAATGGGCTTTATCGAAAGTCAGTGCCTTGATAGCCGTATTGCTGTTGAA
GCCTGGCATAAAGACAAGTTACTCGTCTTTTGTCACCCGGCGCACCCACTAGCAGGGAAACGAGTTGCTCCACGTGAATT
ATATAATATGCCTTGGGTTATGCGAGAGGAAGGCTCAGGCACTCGAGAATGTTTTGTCAGTGCTGCTAATGCGCTTGATA
TGCAACCTCAAGAAAAGTTTTGCTTCTCAACGCCAGATGCAATCAAGCAAGCAGTAAAGCAAGGCGCTGGACTTGGTGTG
TTATCGGAATTAACGCTTGAAGAAGATATCATTCGCAAAGAGTTAGCACTTATCGAAGTGGAAGGTTTAACATTAGAGCG
TAAGTTTTATCGTATCCATCATAAAAGCCGTAACTTTAATCCATTAGGCTTAGCCTTTATTGATTTTTGTCGAGGCTTTT
TAAATACTGATTGCTAA

Upstream 100 bases:

>100_bases
GTCTACAGCGCCCAGTGCCGGACGCGCGGGCCATGCGTCTAACACTCACCACAGTAAGTAAAAGAATTAATCACCTTCAA
ATTAATATTAAAGAGTCTTG

Downstream 100 bases:

>100_bases
CCGGTTTACAGCTTACCTTGGTAGCTTGTTAAGCTATTAAGAAGTACTAGGCTAATGAGTGACGTCGAGCTTGTCATCTA
TTAGCCCTTGAGAGTGCTAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRITLKQLAIFEAVARSGQVAKAAEMVNLSSPAASMALSELEKQFDTRLFERFGNRLRLNSQGSLLLPLATEALQKINQI
EHTFSPAGAELGGNLNVSASSTIGNYLLARSAVAFCQQHTNTLVNVHIDNSQAVINAVLEFRSEMGFIESQCLDSRIAVE
AWHKDKLLVFCHPAHPLAGKRVAPRELYNMPWVMREEGSGTRECFVSAANALDMQPQEKFCFSTPDAIKQAVKQGAGLGV
LSELTLEEDIIRKELALIEVEGLTLERKFYRIHHKSRNFNPLGLAFIDFCRGFLNTDC

Sequences:

>Translated_298_residues
MRITLKQLAIFEAVARSGQVAKAAEMVNLSSPAASMALSELEKQFDTRLFERFGNRLRLNSQGSLLLPLATEALQKINQI
EHTFSPAGAELGGNLNVSASSTIGNYLLARSAVAFCQQHTNTLVNVHIDNSQAVINAVLEFRSEMGFIESQCLDSRIAVE
AWHKDKLLVFCHPAHPLAGKRVAPRELYNMPWVMREEGSGTRECFVSAANALDMQPQEKFCFSTPDAIKQAVKQGAGLGV
LSELTLEEDIIRKELALIEVEGLTLERKFYRIHHKSRNFNPLGLAFIDFCRGFLNTDC
>Mature_298_residues
MRITLKQLAIFEAVARSGQVAKAAEMVNLSSPAASMALSELEKQFDTRLFERFGNRLRLNSQGSLLLPLATEALQKINQI
EHTFSPAGAELGGNLNVSASSTIGNYLLARSAVAFCQQHTNTLVNVHIDNSQAVINAVLEFRSEMGFIESQCLDSRIAVE
AWHKDKLLVFCHPAHPLAGKRVAPRELYNMPWVMREEGSGTRECFVSAANALDMQPQEKFCFSTPDAIKQAVKQGAGLGV
LSELTLEEDIIRKELALIEVEGLTLERKFYRIHHKSRNFNPLGLAFIDFCRGFLNTDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=294, Percent_Identity=37.0748299319728, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1787530, Length=263, Percent_Identity=25.4752851711027, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787601, Length=306, Percent_Identity=23.5294117647059, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788748, Length=294, Percent_Identity=23.469387755102, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787128, Length=298, Percent_Identity=25.503355704698, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081904, Length=204, Percent_Identity=28.4313725490196, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI145693105, Length=203, Percent_Identity=24.1379310344828, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33065; Mature: 33065

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLKQLAIFEAVARSGQVAKAAEMVNLSSPAASMALSELEKQFDTRLFERFGNRLRLN
CEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SQGSLLLPLATEALQKINQIEHTFSPAGAELGGNLNVSASSTIGNYLLARSAVAFCQQHT
CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
NTLVNVHIDNSQAVINAVLEFRSEMGFIESQCLDSRIAVEAWHKDKLLVFCHPAHPLAGK
CEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHEEECCCCEEEEEECCCCCCCC
RVAPRELYNMPWVMREEGSGTRECFVSAANALDMQPQEKFCFSTPDAIKQAVKQGAGLGV
CCCHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCH
LSELTLEEDIIRKELALIEVEGLTLERKFYRIHHKSRNFNPLGLAFIDFCRGFLNTDC
HHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRITLKQLAIFEAVARSGQVAKAAEMVNLSSPAASMALSELEKQFDTRLFERFGNRLRLN
CEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SQGSLLLPLATEALQKINQIEHTFSPAGAELGGNLNVSASSTIGNYLLARSAVAFCQQHT
CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
NTLVNVHIDNSQAVINAVLEFRSEMGFIESQCLDSRIAVEAWHKDKLLVFCHPAHPLAGK
CEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHEEECCCCEEEEEECCCCCCCC
RVAPRELYNMPWVMREEGSGTRECFVSAANALDMQPQEKFCFSTPDAIKQAVKQGAGLGV
CCCHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCH
LSELTLEEDIIRKELALIEVEGLTLERKFYRIHHKSRNFNPLGLAFIDFCRGFLNTDC
HHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]