The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623783

Identifier: 167623783

GI number: 167623783

Start: 2217201

End: 2218061

Strand: Direct

Name: 167623783

Synonym: Shal_1853

Alternate gene names: NA

Gene position: 2217201-2218061 (Clockwise)

Preceding gene: 167623782

Following gene: 167623794

Centisome position: 42.42

GC content: 43.44

Gene sequence:

>861_bases
GTGTTTGGCAATAATATTCGCTGGCTTGGTCTTTTGTTTGTCGGATTCACTGTGCCAGTTCTATCTATGCCAGTTCATAG
CGCTGTAAACTATAGCGCTGTATACCATAGCGCGGTTGAACCTAGTGATAATTTAACGGTTATCACTGCAAAGCAAGTTG
TCTTGCCAATTGATGCCTCACTTAGCGAGACACCGCCCAGTCTGCAGATCTTAACCTATGAAGCCGCGCCATTTGCCTAT
TTAGAGCAGGGGGCTCAAAGTGGGTTATTAGTTGAGTTACTCGCAGAGCTATTCAAGCGCGCAGATCTGGACTACCAATT
GAGCTTTGTCCCGTTAAAGCGGGCGCTATTGACGACGCTACAGCATGAGAATTACTGCGTTACCCCAGTAAATAGGAGCC
AAGAGCGAGAAGCAAAATATCGATGGATAAGCCCTATGCTTATCTCGCGATATGGGCTTTACAGTTCTGATAGCCAGCAG
ATAGCGTTAACCAGCTTAAGTGATGCCAAATCACTGACCATAGGCTCTTACTTAGGCAGTGGTATTGCCGAATATCTCTT
GGATTTAGGTTATAACGTCGAATTGGCCTCGCAAAGACAGCAAAACATCAAAAAACTACAATATCAGCGTATCGATTTAA
TGGCATCGGAGTTAATGAGTGCACGGGAAGATATGCGAGTGATGAATGCAGAGTTAGGGGAACCTGAATTGGTGTTTTAT
ACCTCTATACGTGCGATGGCTTGTAATTTGGACTTGGATTCAAAGATAAAAAACCATCTCGATTCTGCCTTATTGGCAAT
GTATCAAGATGGTTTTATTGATAGCTTATATTTACGCTATGGCGTCACTATAAGCTTGTAA

Upstream 100 bases:

>100_bases
ATCACGAGTATTGAAGCTTGGCTTGAAAATCCAGGCTCTCCTAAAATGCAAAACGATGAGAAACCAAAGGGGCGGACATT
ACCTTATGAGGAGGCTATTC

Downstream 100 bases:

>100_bases
CGTCTCGCTTCTAAGCCTGACTATTTAAGTTGCGCCATGATGTTGCCTGAAAGATACTGAGCAAAGTTATGACCGTGGTT
TTGCAGCATCTTAGGGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Amino Acid Transporter; Amino Acid ABC Transporter

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MFGNNIRWLGLLFVGFTVPVLSMPVHSAVNYSAVYHSAVEPSDNLTVITAKQVVLPIDASLSETPPSLQILTYEAAPFAY
LEQGAQSGLLVELLAELFKRADLDYQLSFVPLKRALLTTLQHENYCVTPVNRSQEREAKYRWISPMLISRYGLYSSDSQQ
IALTSLSDAKSLTIGSYLGSGIAEYLLDLGYNVELASQRQQNIKKLQYQRIDLMASELMSAREDMRVMNAELGEPELVFY
TSIRAMACNLDLDSKIKNHLDSALLAMYQDGFIDSLYLRYGVTISL

Sequences:

>Translated_286_residues
MFGNNIRWLGLLFVGFTVPVLSMPVHSAVNYSAVYHSAVEPSDNLTVITAKQVVLPIDASLSETPPSLQILTYEAAPFAY
LEQGAQSGLLVELLAELFKRADLDYQLSFVPLKRALLTTLQHENYCVTPVNRSQEREAKYRWISPMLISRYGLYSSDSQQ
IALTSLSDAKSLTIGSYLGSGIAEYLLDLGYNVELASQRQQNIKKLQYQRIDLMASELMSAREDMRVMNAELGEPELVFY
TSIRAMACNLDLDSKIKNHLDSALLAMYQDGFIDSLYLRYGVTISL
>Mature_286_residues
MFGNNIRWLGLLFVGFTVPVLSMPVHSAVNYSAVYHSAVEPSDNLTVITAKQVVLPIDASLSETPPSLQILTYEAAPFAY
LEQGAQSGLLVELLAELFKRADLDYQLSFVPLKRALLTTLQHENYCVTPVNRSQEREAKYRWISPMLISRYGLYSSDSQQ
IALTSLSDAKSLTIGSYLGSGIAEYLLDLGYNVELASQRQQNIKKLQYQRIDLMASELMSAREDMRVMNAELGEPELVFY
TSIRAMACNLDLDSKIKNHLDSALLAMYQDGFIDSLYLRYGVTISL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32031; Mature: 32031

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGNNIRWLGLLFVGFTVPVLSMPVHSAVNYSAVYHSAVEPSDNLTVITAKQVVLPIDAS
CCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCEEEEEECEEEEEECCC
LSETPPSLQILTYEAAPFAYLEQGAQSGLLVELLAELFKRADLDYQLSFVPLKRALLTTL
CCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
QHENYCVTPVNRSQEREAKYRWISPMLISRYGLYSSDSQQIALTSLSDAKSLTIGSYLGS
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEHHHHHHH
GIAEYLLDLGYNVELASQRQQNIKKLQYQRIDLMASELMSAREDMRVMNAELGEPELVFY
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TSIRAMACNLDLDSKIKNHLDSALLAMYQDGFIDSLYLRYGVTISL
EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEC
>Mature Secondary Structure
MFGNNIRWLGLLFVGFTVPVLSMPVHSAVNYSAVYHSAVEPSDNLTVITAKQVVLPIDAS
CCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCEEEEEECEEEEEECCC
LSETPPSLQILTYEAAPFAYLEQGAQSGLLVELLAELFKRADLDYQLSFVPLKRALLTTL
CCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
QHENYCVTPVNRSQEREAKYRWISPMLISRYGLYSSDSQQIALTSLSDAKSLTIGSYLGS
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEHHHHHHH
GIAEYLLDLGYNVELASQRQQNIKKLQYQRIDLMASELMSAREDMRVMNAELGEPELVFY
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TSIRAMACNLDLDSKIKNHLDSALLAMYQDGFIDSLYLRYGVTISL
EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA