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The map label for this gene is 167623782

Identifier: 167623782

GI number: 167623782

Start: 2215511

End: 2217214

Strand: Direct

Name: 167623782

Synonym: Shal_1852

Alternate gene names: NA

Gene position: 2215511-2217214 (Clockwise)

Preceding gene: 167623781

Following gene: 167623783

Centisome position: 42.39

GC content: 44.89

Gene sequence:

>1704_bases
GTGCTTAATCAGCTCGTATTACGTTTGAGTATATGTTGTATACTCTTATCCGCGGATATAGCTGCGGCTAGCACGTTTGA
GCGTGCGGCTGAAGATTGGATAACCCATGAGTTTCAGTCATCGACACTGACAAAAAATGAGCAGCGACAAGAGATGCTGT
GGTTTATCAATGCTGCTAAACCTTATCGAAATCTCACGATCCGAGTGACCTCAGAACGGATCCCTACGCATATTTATGAA
TCTGAAGTTTTAGCAAAAGCATTTTATGAGATCACCGGGATCTACGTTGTCCATGAGGTGACGGGGGAAGGCGATGTGTT
ACATAAAATGTCGATACAAAATTCCACTGAGCAGAATTTATATGATGCCTATATTAGTGACAGTGACCTAATTGGTACTC
ATTTCAGGCAAGATTATGTCGTTCCTTTGAGCGATTTTATTACCGGTTCTGGTAAGAATGTCACCTCTCCTACACTGGAT
TTAGAAGACTTTATTGGTCTGAGTTTTACAGCCAGCCCTGATGGTAAGTTATATCAGTTACCCGATCAGCAATTTGTAAA
TCTGTATTGGTATCGAAAAGATTGGTTTTCGAAACCAGAACTCAAGAATTTATTTAGAACCTTGTATGGCTATGAGCTAG
CAGTCCCTCAAAATTGGCAAGCTTACGAAGACATTGCTGAGTTTTTTAGTGATAAAGTGAAAGAGATCGACGGCAAGCGT
ATTTATGGTCATATGGATTATGCGAAGAAACATCCCTCATTAGGTTGGCGTATTTCCGACGCTTGGCTGTCTATGGCTGG
GGTCGGTGACAAGGGCTTGCCTAATGGCACACCCGTTGATGAATGGGGGATCCGTGTCGAAGATTGTCACCCCGTTGGCG
CGAGCACCTCAAGAGGCGGCGCGCTCAATAGTCCCGCCGCTGTTTATGCCGTCGAGAAATATGTCGATTGGCTTAAATAC
GCACCACCTGAGTCCAGAAACCTCTACTTCTCACAGTCTCTTGGCTGGGCAGCTAAAGGGGTTATTGCCCAGCAAATATT
TTGGTATAGCGCCGACATTGAAAACTTAGTCACACCAGGCTCCGTTCTGCTGAATGAAGATGGTACGCCAAAGTGGCGTG
TCGCCCCTTCACCCGTTGGTAAATATTGGCAAGATGGGATGAAATCGGGCTATCAAGATGCAGGAGCCTGGACCTTTTTA
AAGTCGACACCATTAGAAAGGCGCCAAGCAGCTTGGCTCTATGCTCAGTTTGTCGTCTCAAAAACCGTGAGTCTGAAGAA
GTTTCTTAAAGGCTATACTCCAGTTCGATTATCAGATCTTCAATCGGAGCAAGTCTCTGAACTCGCACCTTATTTAGGTG
GTTTAATTGAGTTTTATCGAAGTCGTGGCCGGCAAGTATGGACGCCTACGGGGAATAATGTCCCTGATTACCCCGGAATT
GCTAAATATTGGTGGCAGCATATCGCTATGATTGTAGAAGGCGATAAGAGTGCTCAACAAGCATTAGATCAAATGGCGCA
GGTCGTTGATGAACATTTAGCCTCGCTTGAGCAAAGTGATATGCAGCGCTGTGCACCTAAATTGAATCCCATCACGAGTA
TTGAAGCTTGGCTTGAAAATCCAGGCTCTCCTAAAATGCAAAACGATGAGAAACCAAAGGGGCGGACATTACCTTATGAG
GAGGCTATTCGTGTTTGGCAATAA

Upstream 100 bases:

>100_bases
ATTTTGTAGAGATGTAATCTAATGTCTTATACCGATTGGTATTAGTTAATGATTTAACAACAGAAGAAGACATTCTTAAT
CACTATCAGGGAGTAGATAG

Downstream 100 bases:

>100_bases
TATTCGCTGGCTTGGTCTTTTGTTTGTCGGATTCACTGTGCCAGTTCTATCTATGCCAGTTCATAGCGCTGTAAACTATA
GCGCTGTATACCATAGCGCG

Product: sugar ABC transporter extracellular solute-binding family 1 protein

Products: NA

Alternate protein names: Sugar ABC Transporter; ABC-Type Sugar Transport System Periplasmic Component; Twin-Arginine Translocation Pathway Signal; Abc-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MLNQLVLRLSICCILLSADIAAASTFERAAEDWITHEFQSSTLTKNEQRQEMLWFINAAKPYRNLTIRVTSERIPTHIYE
SEVLAKAFYEITGIYVVHEVTGEGDVLHKMSIQNSTEQNLYDAYISDSDLIGTHFRQDYVVPLSDFITGSGKNVTSPTLD
LEDFIGLSFTASPDGKLYQLPDQQFVNLYWYRKDWFSKPELKNLFRTLYGYELAVPQNWQAYEDIAEFFSDKVKEIDGKR
IYGHMDYAKKHPSLGWRISDAWLSMAGVGDKGLPNGTPVDEWGIRVEDCHPVGASTSRGGALNSPAAVYAVEKYVDWLKY
APPESRNLYFSQSLGWAAKGVIAQQIFWYSADIENLVTPGSVLLNEDGTPKWRVAPSPVGKYWQDGMKSGYQDAGAWTFL
KSTPLERRQAAWLYAQFVVSKTVSLKKFLKGYTPVRLSDLQSEQVSELAPYLGGLIEFYRSRGRQVWTPTGNNVPDYPGI
AKYWWQHIAMIVEGDKSAQQALDQMAQVVDEHLASLEQSDMQRCAPKLNPITSIEAWLENPGSPKMQNDEKPKGRTLPYE
EAIRVWQ

Sequences:

>Translated_567_residues
MLNQLVLRLSICCILLSADIAAASTFERAAEDWITHEFQSSTLTKNEQRQEMLWFINAAKPYRNLTIRVTSERIPTHIYE
SEVLAKAFYEITGIYVVHEVTGEGDVLHKMSIQNSTEQNLYDAYISDSDLIGTHFRQDYVVPLSDFITGSGKNVTSPTLD
LEDFIGLSFTASPDGKLYQLPDQQFVNLYWYRKDWFSKPELKNLFRTLYGYELAVPQNWQAYEDIAEFFSDKVKEIDGKR
IYGHMDYAKKHPSLGWRISDAWLSMAGVGDKGLPNGTPVDEWGIRVEDCHPVGASTSRGGALNSPAAVYAVEKYVDWLKY
APPESRNLYFSQSLGWAAKGVIAQQIFWYSADIENLVTPGSVLLNEDGTPKWRVAPSPVGKYWQDGMKSGYQDAGAWTFL
KSTPLERRQAAWLYAQFVVSKTVSLKKFLKGYTPVRLSDLQSEQVSELAPYLGGLIEFYRSRGRQVWTPTGNNVPDYPGI
AKYWWQHIAMIVEGDKSAQQALDQMAQVVDEHLASLEQSDMQRCAPKLNPITSIEAWLENPGSPKMQNDEKPKGRTLPYE
EAIRVWQ
>Mature_567_residues
MLNQLVLRLSICCILLSADIAAASTFERAAEDWITHEFQSSTLTKNEQRQEMLWFINAAKPYRNLTIRVTSERIPTHIYE
SEVLAKAFYEITGIYVVHEVTGEGDVLHKMSIQNSTEQNLYDAYISDSDLIGTHFRQDYVVPLSDFITGSGKNVTSPTLD
LEDFIGLSFTASPDGKLYQLPDQQFVNLYWYRKDWFSKPELKNLFRTLYGYELAVPQNWQAYEDIAEFFSDKVKEIDGKR
IYGHMDYAKKHPSLGWRISDAWLSMAGVGDKGLPNGTPVDEWGIRVEDCHPVGASTSRGGALNSPAAVYAVEKYVDWLKY
APPESRNLYFSQSLGWAAKGVIAQQIFWYSADIENLVTPGSVLLNEDGTPKWRVAPSPVGKYWQDGMKSGYQDAGAWTFL
KSTPLERRQAAWLYAQFVVSKTVSLKKFLKGYTPVRLSDLQSEQVSELAPYLGGLIEFYRSRGRQVWTPTGNNVPDYPGI
AKYWWQHIAMIVEGDKSAQQALDQMAQVVDEHLASLEQSDMQRCAPKLNPITSIEAWLENPGSPKMQNDEKPKGRTLPYE
EAIRVWQ

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64363; Mature: 64363

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQLVLRLSICCILLSADIAAASTFERAAEDWITHEFQSSTLTKNEQRQEMLWFINAAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCC
PYRNLTIRVTSERIPTHIYESEVLAKAFYEITGIYVVHEVTGEGDVLHKMSIQNSTEQNL
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCCHHHH
YDAYISDSDLIGTHFRQDYVVPLSDFITGSGKNVTSPTLDLEDFIGLSFTASPDGKLYQL
HHHHCCCCCCHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCEEEC
PDQQFVNLYWYRKDWFSKPELKNLFRTLYGYELAVPQNWQAYEDIAEFFSDKVKEIDGKR
CCHHHEEEEEEEHHCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCCE
IYGHMDYAKKHPSLGWRISDAWLSMAGVGDKGLPNGTPVDEWGIRVEDCHPVGASTSRGG
EEEECHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHCCEEECCCCCCCCCCCCC
ALNSPAAVYAVEKYVDWLKYAPPESRNLYFSQSLGWAAKGVIAQQIFWYSADIENLVTPG
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCC
SVLLNEDGTPKWRVAPSPVGKYWQDGMKSGYQDAGAWTFLKSTPLERRQAAWLYAQFVVS
CEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHH
KTVSLKKFLKGYTPVRLSDLQSEQVSELAPYLGGLIEFYRSRGRQVWTPTGNNVPDYPGI
HHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCH
AKYWWQHIAMIVEGDKSAQQALDQMAQVVDEHLASLEQSDMQRCAPKLNPITSIEAWLEN
HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PGSPKMQNDEKPKGRTLPYEEAIRVWQ
CCCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MLNQLVLRLSICCILLSADIAAASTFERAAEDWITHEFQSSTLTKNEQRQEMLWFINAAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCC
PYRNLTIRVTSERIPTHIYESEVLAKAFYEITGIYVVHEVTGEGDVLHKMSIQNSTEQNL
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCCHHHH
YDAYISDSDLIGTHFRQDYVVPLSDFITGSGKNVTSPTLDLEDFIGLSFTASPDGKLYQL
HHHHCCCCCCHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCEEEC
PDQQFVNLYWYRKDWFSKPELKNLFRTLYGYELAVPQNWQAYEDIAEFFSDKVKEIDGKR
CCHHHEEEEEEEHHCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCCE
IYGHMDYAKKHPSLGWRISDAWLSMAGVGDKGLPNGTPVDEWGIRVEDCHPVGASTSRGG
EEEECHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHCCEEECCCCCCCCCCCCC
ALNSPAAVYAVEKYVDWLKYAPPESRNLYFSQSLGWAAKGVIAQQIFWYSADIENLVTPG
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCC
SVLLNEDGTPKWRVAPSPVGKYWQDGMKSGYQDAGAWTFLKSTPLERRQAAWLYAQFVVS
CEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEHHCCCCHHHHHHHHHHHHHHH
KTVSLKKFLKGYTPVRLSDLQSEQVSELAPYLGGLIEFYRSRGRQVWTPTGNNVPDYPGI
HHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCH
AKYWWQHIAMIVEGDKSAQQALDQMAQVVDEHLASLEQSDMQRCAPKLNPITSIEAWLEN
HHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PGSPKMQNDEKPKGRTLPYEEAIRVWQ
CCCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA