Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is 167623737
Identifier: 167623737
GI number: 167623737
Start: 2160449
End: 2161036
Strand: Direct
Name: 167623737
Synonym: Shal_1807
Alternate gene names: NA
Gene position: 2160449-2161036 (Clockwise)
Preceding gene: 167623736
Following gene: 167623738
Centisome position: 41.33
GC content: 43.37
Gene sequence:
>588_bases ATGAAAAGTATAATTATGGGCATATTATTGCTGCCTTTGTCGCTGATGGTATCGGCTGGCACTTGGACTGTTGAAAATGA CAGCTCAGAGGTTAACTTTATATCCGTTAAGAAGGGCGATATTGCCGAGGTTCATCATTTTAATTCCATCGCCGGTACCT TGACGGACAAGGGGAAGTTCGATTTTTCAATTGCTTTGGCAAGTGTGGCAACAAACATCGATATTCGTAATGAACGTATG GAGTCTTTACTATTCGAGGTCGATAAGTACCCAAAACTGATACTAAAGGCTCATGTTGACCCTAAGATACTTAATAGTCT TGCCGTTGGCTCGGTGAAAGTTGCAACGATTGACGCCGAAGTTAGCTTACATGGCAAGAAGCAGAAGATGGCGTTTACGG TGAGTATCGCAAAGCTATCTGACTCTCACATCCTTGTTGCGAGTGTAGCGCCTATCATTGTCATGGCTGGCAGTTTTGGC CTGTCTGCGGGAGTCGATAAATTACGTGAAATAGCCGGATTATCGGCAATAAGTAAAGCGGTACCCGTGTCATTTATGCT CAATCTTAAACAACAGTCTAAACGATAG
Upstream 100 bases:
>100_bases GGCTTAGGTGTAAAAAATGGGTGTCAGTGGATAGTTAACTGTTGAATTAGGTTAAGCTTAACTATTAAGGTGAATAACGA GATCACGAGAGGGAGTGGAG
Downstream 100 bases:
>100_bases CTTAAACGGTATAACGCTAACTTTGAGCGGCTTTGAGTGCTTTTGGGGGAGAGGTGCGCTTAAGTTATGTTGTAAAGTGT GGCGCATGTTGTGGGAAAAG
Product: YceI family protein
Products: NA
Alternate protein names: YceI Like Family Protein; YceI-Like Family Protein; YceI Like Family
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKSIIMGILLLPLSLMVSAGTWTVENDSSEVNFISVKKGDIAEVHHFNSIAGTLTDKGKFDFSIALASVATNIDIRNERM ESLLFEVDKYPKLILKAHVDPKILNSLAVGSVKVATIDAEVSLHGKKQKMAFTVSIAKLSDSHILVASVAPIIVMAGSFG LSAGVDKLREIAGLSAISKAVPVSFMLNLKQQSKR
Sequences:
>Translated_195_residues MKSIIMGILLLPLSLMVSAGTWTVENDSSEVNFISVKKGDIAEVHHFNSIAGTLTDKGKFDFSIALASVATNIDIRNERM ESLLFEVDKYPKLILKAHVDPKILNSLAVGSVKVATIDAEVSLHGKKQKMAFTVSIAKLSDSHILVASVAPIIVMAGSFG LSAGVDKLREIAGLSAISKAVPVSFMLNLKQQSKR >Mature_195_residues MKSIIMGILLLPLSLMVSAGTWTVENDSSEVNFISVKKGDIAEVHHFNSIAGTLTDKGKFDFSIALASVATNIDIRNERM ESLLFEVDKYPKLILKAHVDPKILNSLAVGSVKVATIDAEVSLHGKKQKMAFTVSIAKLSDSHILVASVAPIIVMAGSFG LSAGVDKLREIAGLSAISKAVPVSFMLNLKQQSKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20919; Mature: 20919
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIIMGILLLPLSLMVSAGTWTVENDSSEVNFISVKKGDIAEVHHFNSIAGTLTDKGKF CHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCC DFSIALASVATNIDIRNERMESLLFEVDKYPKLILKAHVDPKILNSLAVGSVKVATIDAE CCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEEEEEE VSLHGKKQKMAFTVSIAKLSDSHILVASVAPIIVMAGSFGLSAGVDKLREIAGLSAISKA EEECCCCEEEEEEEEEEEECCCEEEEEEHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHH VPVSFMLNLKQQSKR CCHHHEEECHHHCCC >Mature Secondary Structure MKSIIMGILLLPLSLMVSAGTWTVENDSSEVNFISVKKGDIAEVHHFNSIAGTLTDKGKF CHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCC DFSIALASVATNIDIRNERMESLLFEVDKYPKLILKAHVDPKILNSLAVGSVKVATIDAE CCEEEEEHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEEEEEE VSLHGKKQKMAFTVSIAKLSDSHILVASVAPIIVMAGSFGLSAGVDKLREIAGLSAISKA EEECCCCEEEEEEEEEEEECCCEEEEEEHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHH VPVSFMLNLKQQSKR CCHHHEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA