Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
---|---|
Accession | NC_010334 |
Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is 167623682
Identifier: 167623682
GI number: 167623682
Start: 2100197
End: 2100478
Strand: Direct
Name: 167623682
Synonym: Shal_1751
Alternate gene names: NA
Gene position: 2100197-2100478 (Clockwise)
Preceding gene: 167623681
Following gene: 167623683
Centisome position: 40.18
GC content: 34.75
Gene sequence:
>282_bases ATGGAAGTTAAAATGACTCAAGCGAATGATTATGAAATGGTTTTAGTAGAAAGTTATATTGTCAATAACACATCAGGGAA GCATGGGAATATTCATATTCGTCCTGTAGAAGGGAATAAATATACTTCGGAACTTCAAGTGGCATGCTCTAAATCACTAA GTGATCCAAAGTGCTTTCCAGTTGGTACTAAATTTATGCTTCAAGCTAAATTAACTGATAGAGCTAGTGGTGGTAAGTAT CTTTACAGTCATCCTCGCTGGAAATATGAGATTGTTAAGTAA
Upstream 100 bases:
>100_bases CAGGGACAATGGGTGGTGTATAAAGACTAGCCTGTTCAAGCTAAAGGCTAAAGAAGTGCATTTAGCTTTAGGCTTTTACC ACGTTTTATAGTGTTTACAA
Downstream 100 bases:
>100_bases TGAAGTTTAAAAATGTCATATTTCTTATGTAGAAGGTTTTAATGATTTAGATGGTGGTAAAAATTTCTATGCTTGACCAA ATAAAAGAATTCATAAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MEVKMTQANDYEMVLVESYIVNNTSGKHGNIHIRPVEGNKYTSELQVACSKSLSDPKCFPVGTKFMLQAKLTDRASGGKY LYSHPRWKYEIVK
Sequences:
>Translated_93_residues MEVKMTQANDYEMVLVESYIVNNTSGKHGNIHIRPVEGNKYTSELQVACSKSLSDPKCFPVGTKFMLQAKLTDRASGGKY LYSHPRWKYEIVK >Mature_93_residues MEVKMTQANDYEMVLVESYIVNNTSGKHGNIHIRPVEGNKYTSELQVACSKSLSDPKCFPVGTKFMLQAKLTDRASGGKY LYSHPRWKYEIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10587; Mature: 10587
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKMTQANDYEMVLVESYIVNNTSGKHGNIHIRPVEGNKYTSELQVACSKSLSDPKCFP CCEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCHHHHEEECCCCCCCCEEE VGTKFMLQAKLTDRASGGKYLYSHPRWKYEIVK CCCEEEEEEECCCCCCCCCEEEECCCEEEEEEC >Mature Secondary Structure MEVKMTQANDYEMVLVESYIVNNTSGKHGNIHIRPVEGNKYTSELQVACSKSLSDPKCFP CCEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCHHHHEEECCCCCCCCEEE VGTKFMLQAKLTDRASGGKYLYSHPRWKYEIVK CCCEEEEEEECCCCCCCCCEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA