Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623681

Identifier: 167623681

GI number: 167623681

Start: 2099743

End: 2100126

Strand: Direct

Name: 167623681

Synonym: Shal_1750

Alternate gene names: NA

Gene position: 2099743-2100126 (Clockwise)

Preceding gene: 167623680

Following gene: 167623682

Centisome position: 40.17

GC content: 37.24

Gene sequence:

>384_bases
ATGAAAAAGCTATTTTTAATAATTATTGCGGGACTTATATCTACTGGTTGTACGTTAAATCAAGAACTAGGTCTATTATC
CATGACTACAGACTCTATGGAAGAGCGGGAAAAGGTTAGGTTTGTCGCTATCCACTATAGTGTGCTTTTGTCCTGTGATA
AAAGCTATGAACATCTACCAAAATTAGCTAATAGGTTTAGAGAGTTAGAAGTGGTAGCCCCTCAAACAGCTTGGGGGTTA
AAAGCCTTAGGTGGTGATTTGCCTCCAGCTAAAACTTACATGTTAATTGGTTGCGATAAAGCAAAAACAAATGTAGAACA
TTGGGTCAAAACTAAAGAATATTATTATCACGGTCAGGGACAATGGGTGGTGTATAAAGACTAG

Upstream 100 bases:

>100_bases
ACCAAAAATATGATGTATGGGGGTACGTATATAGAACCAATAGTTTTGGTCAAATCCTAGTTGCTTATGTGAAGCGTAAT
GATGATAAAAGGGAGTTCTT

Downstream 100 bases:

>100_bases
CCTGTTCAAGCTAAAGGCTAAAGAAGTGCATTTAGCTTTAGGCTTTTACCACGTTTTATAGTGTTTACAAATGGAAGTTA
AAATGACTCAAGCGAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLPKLANRFRELEVVAPQTAWGL
KALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQGQWVVYKD

Sequences:

>Translated_127_residues
MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLPKLANRFRELEVVAPQTAWGL
KALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQGQWVVYKD
>Mature_127_residues
MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLPKLANRFRELEVVAPQTAWGL
KALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQGQWVVYKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14482; Mature: 14482

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLP
CCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHEEEEEEEEEEEEECCCCHHHHH
KLANRFRELEVVAPQTAWGLKALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQG
HHHHHHHHEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCEEEECCC
QWVVYKD
EEEEEEC
>Mature Secondary Structure
MKKLFLIIIAGLISTGCTLNQELGLLSMTTDSMEEREKVRFVAIHYSVLLSCDKSYEHLP
CCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHEEEEEEEEEEEEECCCCHHHHH
KLANRFRELEVVAPQTAWGLKALGGDLPPAKTYMLIGCDKAKTNVEHWVKTKEYYYHGQG
HHHHHHHHEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCEEEECCC
QWVVYKD
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA