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The map label for this gene is ybgC [H]

Identifier: 167623618

GI number: 167623618

Start: 2023861

End: 2024259

Strand: Direct

Name: ybgC [H]

Synonym: Shal_1687

Alternate gene names: 167623618

Gene position: 2023861-2024259 (Clockwise)

Preceding gene: 167623617

Following gene: 167623619

Centisome position: 38.72

GC content: 42.61

Gene sequence:

>399_bases
ATGTTTCGTTGGCCTATTTCGGTTTATTATGAAGATACTGACGCTGGTGGTGTTGTTTACCATTCAAATTACCTAAAGTT
TTTTGAGCGAGCGCGCACCGAATGGTTGCGTGCTATGGGAGTGAGCCAAAGCACTCTGTTAGCAGATGATATTGCGTTTG
TCGTAAAACGTGCCGCATTAGATTTTTGTAAAGCCGCGCGTTTTGAACAGAACCTTATTGTTGAAACCAAGGTCATACAA
CTTAAGAAAGCATCATTGGTGTTTGAACAACGCTTAATTGACGAGCAAGGTGTCGTGTATTGCGAAGCAGAAATTCTGGT
TGCTTGTATCGCGCTATCACGTATGAGACCTCAAGCTATTCCCCAAAATATTGCGCAGGAGTTTAAAGTTGGAAGCTGA

Upstream 100 bases:

>100_bases
TGAAGAAGCGCATCGCATATCACATATCGAGATTCACAATTGCATACTGGCTAGGTATAGTAGGCCTCTATTTTATCTCA
TCGATTGGCGATTATCGTTT

Downstream 100 bases:

>100_bases
TATTTCTTTTATTGGATTATTTTTACAAGCAAGTCTACTGGTTAAATTTGTTATGTTGACTCTGCTTAGTCTATCAATCG
CTTCATGGGCGGTCATTATT

Product: Pol-Pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: Acyl-CoA thioesterase [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMGVSQSTLLADDIAFVVKRAALDFCKAARFEQNLIVETKVIQ
LKKASLVFEQRLIDEQGVVYCEAEILVACIALSRMRPQAIPQNIAQEFKVGS

Sequences:

>Translated_132_residues
MFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMGVSQSTLLADDIAFVVKRAALDFCKAARFEQNLIVETKVIQ
LKKASLVFEQRLIDEQGVVYCEAEILVACIALSRMRPQAIPQNIAQEFKVGS
>Mature_132_residues
MFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMGVSQSTLLADDIAFVVKRAALDFCKAARFEQNLIVETKVIQ
LKKASLVFEQRLIDEQGVVYCEAEILVACIALSRMRPQAIPQNIAQEFKVGS

Specific function: Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=129, Percent_Identity=46.5116279069767, Blast_Score=142, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15085; Mature: 15085

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMGVSQSTLLADDIAFVVKRAAL
CCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DFCKAARFEQNLIVETKVIQLKKASLVFEQRLIDEQGVVYCEAEILVACIALSRMRPQAI
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCH
PQNIAQEFKVGS
HHHHHHHHCCCC
>Mature Secondary Structure
MFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMGVSQSTLLADDIAFVVKRAAL
CCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DFCKAARFEQNLIVETKVIQLKKASLVFEQRLIDEQGVVYCEAEILVACIALSRMRPQAI
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCH
PQNIAQEFKVGS
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]