Click here to switch to the map view.

The map label for this gene is 167623593

Identifier: 167623593

GI number: 167623593

Start: 1992520

End: 1992927

Strand: Direct

Name: 167623593

Synonym: Shal_1662

Alternate gene names: NA

Gene position: 1992520-1992927 (Clockwise)

Preceding gene: 167623592

Following gene: 167623594

Centisome position: 38.12

GC content: 48.28

Gene sequence:

>408_bases
ATGAAGACTGAAAATCTGGTAAGAAATCATGATGTCATGAGTCAAGATTATGCCATGATCGATGGCCTGCAAACCGTGGC
CGAGGCTATTGACCACGCGGTGAAAAGCAGGGTAAACGTGCTGTTTGTTAATAAGCGCCATGAAGATGATGAGTTCGGCA
TGGTACTGATGAGTGACATTGCCAAGAAGGTGCTCGCACAGGATAGATCCCCCGAGAGAGTCAACGTTTATGAGATCATG
GTCAAGCCAGTGCTATGTGTACCCGGCACGATGGATGTGCGTTACAGTGCTCGGCTATTCGAGCGTTTCGGCATTACTAA
GGCGCCTGTGATAGAGAGCGGTAAGATAGCCGGATTGGTGAGTTACCACGATATAGTGCTTAAAGGCATGATCAATAAGG
TGGGCTAG

Upstream 100 bases:

>100_bases
GCGATTCGGGTAAAGGTATTGCCATTCAAATTGATGTGGAAGACGCCGTAGGGGTTGCCCACCAAGTACAAAAACTAACT
CATGATATTGAGGATCAAAT

Downstream 100 bases:

>100_bases
CCTTTTGAAAATGAGCGCAGAGTTAGCAATAACTCGGCGCCTCTTACTACTAAGTTGTTAGCTCAGGCTTATTCTTCCCT
CTTATTCCTTACACTTTACT

Product: signal-transduction protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Signal-Transduction Protein With CBS Domains; Signal Transduction Protein With CBS Domains; CBS Domain Containing Protein; Signal Transduction Protein; CBS Domain Protein; CP12 Polypeptide; CBS Domain Pair Protein; CP12 Domain Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKTENLVRNHDVMSQDYAMIDGLQTVAEAIDHAVKSRVNVLFVNKRHEDDEFGMVLMSDIAKKVLAQDRSPERVNVYEIM
VKPVLCVPGTMDVRYSARLFERFGITKAPVIESGKIAGLVSYHDIVLKGMINKVG

Sequences:

>Translated_135_residues
MKTENLVRNHDVMSQDYAMIDGLQTVAEAIDHAVKSRVNVLFVNKRHEDDEFGMVLMSDIAKKVLAQDRSPERVNVYEIM
VKPVLCVPGTMDVRYSARLFERFGITKAPVIESGKIAGLVSYHDIVLKGMINKVG
>Mature_135_residues
MKTENLVRNHDVMSQDYAMIDGLQTVAEAIDHAVKSRVNVLFVNKRHEDDEFGMVLMSDIAKKVLAQDRSPERVNVYEIM
VKPVLCVPGTMDVRYSARLFERFGITKAPVIESGKIAGLVSYHDIVLKGMINKVG

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15164; Mature: 15164

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTENLVRNHDVMSQDYAMIDGLQTVAEAIDHAVKSRVNVLFVNKRHEDDEFGMVLMSDI
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
AKKVLAQDRSPERVNVYEIMVKPVLCVPGTMDVRYSARLFERFGITKAPVIESGKIAGLV
HHHHHHCCCCCCCCHHHHHEEHHHEECCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEHH
SYHDIVLKGMINKVG
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTENLVRNHDVMSQDYAMIDGLQTVAEAIDHAVKSRVNVLFVNKRHEDDEFGMVLMSDI
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
AKKVLAQDRSPERVNVYEIMVKPVLCVPGTMDVRYSARLFERFGITKAPVIESGKIAGLV
HHHHHHCCCCCCCCHHHHHEEHHHEECCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEHH
SYHDIVLKGMINKVG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA