Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623592

Identifier: 167623592

GI number: 167623592

Start: 1992173

End: 1992523

Strand: Direct

Name: 167623592

Synonym: Shal_1661

Alternate gene names: NA

Gene position: 1992173-1992523 (Clockwise)

Preceding gene: 167623591

Following gene: 167623593

Centisome position: 38.11

GC content: 47.86

Gene sequence:

>351_bases
ATGCGCTTTAAACTGATCTTGGTGTTTATTGACGACGCCTGTACCGACTCTATTCTCGATGCCGCTCGCAGTAAAGGAGC
GACGGGGGCGACAGTGATTAATCATGCGCGCGGTGAGGGACTGAATAAACAGAAAACCTTTATGGGGCTGTCGTTAGACG
TGCAGCGTGATGTGGTGCTGCTACTGGTTGAAGAGCACCTATGCCGAGCTATTTTAGAAACCGTTAGTGAAGTCGGCGGT
TTTGACAGCGATTCGGGTAAAGGTATTGCCATTCAAATTGATGTGGAAGACGCCGTAGGGGTTGCCCACCAAGTACAAAA
ACTAACTCATGATATTGAGGATCAAATATGA

Upstream 100 bases:

>100_bases
TTTGGGCTCATCGCCTTTGCCAGTTTATTTCCGATGATCACTGTGATGGGCTATGCCCAGCTAGTGGAACTTAAGAATAA
AACCCAAAAGGAGCGAGATA

Downstream 100 bases:

>100_bases
AGACTGAAAATCTGGTAAGAAATCATGATGTCATGAGTCAAGATTATGCCATGATCGATGGCCTGCAAACCGTGGCCGAG
GCTATTGACCACGCGGTGAA

Product: putative nitrogen regulatory protein P-II

Products: NA

Alternate protein names: Nitrogen Regulatory Protein P-II Family Protein; Nitrogen Regulatory Protein PII

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRFKLILVFIDDACTDSILDAARSKGATGATVINHARGEGLNKQKTFMGLSLDVQRDVVLLLVEEHLCRAILETVSEVGG
FDSDSGKGIAIQIDVEDAVGVAHQVQKLTHDIEDQI

Sequences:

>Translated_116_residues
MRFKLILVFIDDACTDSILDAARSKGATGATVINHARGEGLNKQKTFMGLSLDVQRDVVLLLVEEHLCRAILETVSEVGG
FDSDSGKGIAIQIDVEDAVGVAHQVQKLTHDIEDQI
>Mature_116_residues
MRFKLILVFIDDACTDSILDAARSKGATGATVINHARGEGLNKQKTFMGLSLDVQRDVVLLLVEEHLCRAILETVSEVGG
FDSDSGKGIAIQIDVEDAVGVAHQVQKLTHDIEDQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12545; Mature: 12545

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKLILVFIDDACTDSILDAARSKGATGATVINHARGEGLNKQKTFMGLSLDVQRDVVL
CCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHEEECEEECCHHHHH
LLVEEHLCRAILETVSEVGGFDSDSGKGIAIQIDVEDAVGVAHQVQKLTHDIEDQI
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFKLILVFIDDACTDSILDAARSKGATGATVINHARGEGLNKQKTFMGLSLDVQRDVVL
CCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHEEECEEECCHHHHH
LLVEEHLCRAILETVSEVGGFDSDSGKGIAIQIDVEDAVGVAHQVQKLTHDIEDQI
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA