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The map label for this gene is 167623558

Identifier: 167623558

GI number: 167623558

Start: 1951741

End: 1952400

Strand: Direct

Name: 167623558

Synonym: Shal_1627

Alternate gene names: NA

Gene position: 1951741-1952400 (Clockwise)

Preceding gene: 167623557

Following gene: 167623559

Centisome position: 37.34

GC content: 43.33

Gene sequence:

>660_bases
ATGCGGTTTGGTGTCATGCCTGAGAAAACAACCAATAAAGTCTGCCCCGGTAAAGCGTTTGATAAAGCGAGTGAACAAAA
TGTTCGCGCCGCGCTTATTCGTTCAGCAAACCAATGCTTTACCGCTTCAGATTATGATAGCGTCAGCATTCGGCTAATTG
CCCAGCAGGCTGACGTTAACATGGCAATGATCCGTTATTACTTTGGTGATAAGTTAGGCCTGTTTGAGGCCATGGTGACC
GAGCAGATCCAGCCTATCTATCAACGTGCGAAAGCACTACAAAAAAGTCACGACAAGCCCACGATAGCGGATCTGATCAC
TGAGTTTTACCAAACCATGATCCCCAACCCCGAATTTCCCCGTTTTCTATTTCGCTTAATGAACTCTGATGGTTCAAGTG
AAGCAAAAGGCATTATTTTTAAGTTATTTACGCCTATTGTTGATCTGACTCCTATGCCTAAACAGTTACTCGAAGAGTGC
GGCGATTTCGATCCTATGATGGTGAAGATGTCGATACTCAGTCTTATGATTTTTCCCTTTGTTATGCCGTTATCAATGGC
AAAACTGCACGGTTATCAACTCAATGATGAATTTTATACTCAATTGGCCAAACACAATATTACACTTCTGCAGCAGGGTC
TCTATGGGGGGAAGCAATAA

Upstream 100 bases:

>100_bases
TTTATGGAGTGTGCAGTTATTCAAAACTCTGGTTTTTGAATAACGATAGTTCATGCAAAAAAACAGGCCAGACAGTAGAC
TTGCGCTATTCAAGTGAATA

Downstream 100 bases:

>100_bases
TGTCAGCGTTTAAGGGTAAGCGATGGTATTTCTTTCCTGCGGTTGCCGTGGGTTTTGTGGTGCTGGTGTTAGTGGTCAAG
CTACGTAGTCACCCACCACT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator Of TetR Family Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRFGVMPEKTTNKVCPGKAFDKASEQNVRAALIRSANQCFTASDYDSVSIRLIAQQADVNMAMIRYYFGDKLGLFEAMVT
EQIQPIYQRAKALQKSHDKPTIADLITEFYQTMIPNPEFPRFLFRLMNSDGSSEAKGIIFKLFTPIVDLTPMPKQLLEEC
GDFDPMMVKMSILSLMIFPFVMPLSMAKLHGYQLNDEFYTQLAKHNITLLQQGLYGGKQ

Sequences:

>Translated_219_residues
MRFGVMPEKTTNKVCPGKAFDKASEQNVRAALIRSANQCFTASDYDSVSIRLIAQQADVNMAMIRYYFGDKLGLFEAMVT
EQIQPIYQRAKALQKSHDKPTIADLITEFYQTMIPNPEFPRFLFRLMNSDGSSEAKGIIFKLFTPIVDLTPMPKQLLEEC
GDFDPMMVKMSILSLMIFPFVMPLSMAKLHGYQLNDEFYTQLAKHNITLLQQGLYGGKQ
>Mature_219_residues
MRFGVMPEKTTNKVCPGKAFDKASEQNVRAALIRSANQCFTASDYDSVSIRLIAQQADVNMAMIRYYFGDKLGLFEAMVT
EQIQPIYQRAKALQKSHDKPTIADLITEFYQTMIPNPEFPRFLFRLMNSDGSSEAKGIIFKLFTPIVDLTPMPKQLLEEC
GDFDPMMVKMSILSLMIFPFVMPLSMAKLHGYQLNDEFYTQLAKHNITLLQQGLYGGKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24918; Mature: 24918

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFGVMPEKTTNKVCPGKAFDKASEQNVRAALIRSANQCFTASDYDSVSIRLIAQQADVN
CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCH
MAMIRYYFGDKLGLFEAMVTEQIQPIYQRAKALQKSHDKPTIADLITEFYQTMIPNPEFP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH
RFLFRLMNSDGSSEAKGIIFKLFTPIVDLTPMPKQLLEECGDFDPMMVKMSILSLMIFPF
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VMPLSMAKLHGYQLNDEFYTQLAKHNITLLQQGLYGGKQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFGVMPEKTTNKVCPGKAFDKASEQNVRAALIRSANQCFTASDYDSVSIRLIAQQADVN
CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCH
MAMIRYYFGDKLGLFEAMVTEQIQPIYQRAKALQKSHDKPTIADLITEFYQTMIPNPEFP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH
RFLFRLMNSDGSSEAKGIIFKLFTPIVDLTPMPKQLLEECGDFDPMMVKMSILSLMIFPF
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VMPLSMAKLHGYQLNDEFYTQLAKHNITLLQQGLYGGKQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA