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The map label for this gene is emrK [C]

Identifier: 167623559

GI number: 167623559

Start: 1952400

End: 1953743

Strand: Direct

Name: emrK [C]

Synonym: Shal_1628

Alternate gene names: 167623559

Gene position: 1952400-1953743 (Clockwise)

Preceding gene: 167623558

Following gene: 167623560

Centisome position: 37.35

GC content: 50.6

Gene sequence:

>1344_bases
ATGTCAGCGTTTAAGGGTAAGCGATGGTATTTCTTTCCTGCGGTTGCCGTGGGTTTTGTGGTGCTGGTGTTAGTGGTCAA
GCTACGTAGTCACCCACCACTAGAGCTACAGGCAGAGCCGAGTAAGTTAGTTGAGGTTATATCTCTAGAAAAGAGCCCTG
TGGTGGCGCAAGTGGATGCCTTTGGCCGCGTCAGCCCTAAGATCCAGTGGCAACTATTGCCTGAGGTCGGTGGTCGTGTG
GTGTATAAACACCCAGATCTCGCTGTGGGTAAAATCCTTCCACAAGACACTCTGTTACTGGCTATCGACCCGCTAGATTA
TCAAATCCGTCTGGCTCAGGCACAGGCTGACCGTAAGGCCCTAGAAGGTCAGCTAGAAGGTAAGAAACTACAACTTAAAA
ACCTGCAGTTATCGCTGGAGATTGAAAACAATCGCTATGACTTGGTTAAATCCGATCTAAAACGCAAAGAGACACTGCGA
AAACAAAACCTTATCTCCCAATCAGAGCTCGATGGTGAACGGCAAAACCTACTTGCACAGCAACAAAAACTGCAAGAGTT
AGATAACAGCCTGAATTTGATGCCAAACGAGACACAAATTCTTGAGGCACAACGACTGCAAGCCGTTGCCCGTGAGCAGG
AAGCGCAGAGTCAACTAACCAAGACCGAAATCCGTCTCCCCTTTGAAGGCCGCGTAGCCGAGGTCAATGTAGAAAGTAGC
CAGGTGGTATCGCCGCAGCAGGTGTTAGCGCGCATTAATGGCATTGAAGTGATGGAGGTCGAGGCTCAAGTGTCACTGGG
TGATGTGATGACCCTGATGAAAACGGTTAACCGACCACAGGAGCAAGAGAAGCAGTTACCTCGCGCCGAGACTTTGGGTT
TGAGCGCCGAGATCACCTTAAAGGGCGCCACTTACTCCTTTAGTTGGCCAGCTCAGATCACTCGAATCGGTGAAACGGTG
GATCCCACATTAGCGACTGTAAGCGTTGTTTTGCAGGTTGAGCAGCAGTATCGCGATCTAAAAATGGGCCAGTCGCCACC
ATTGGTGAATGGCATGTTTGTCAGTGCCCGTATTAAAGGCGGCGAGCGTGACTACTGGATGGTGCCTGAGCGTGCGCTGC
ACGGTGATAAGCTCTATATCATGAGCCAAGACAAGCGTTTACAGCTTGTCGATGTTCAAGTGCTGTTCCGTCAAGAGGGG
CAAGCGGCGGTGCAAGGTAAGCTAATAGAGGGAATGCAGTTAGTATTAACCGACCTTATTCCCGCCGTTAATGGTATGGC
GCTACGCAGCCAAGGGGTCGACACAAAGGCAGCTGTTCCTGCAAAAGGGGAGATGTTGCCGTGA

Upstream 100 bases:

>100_bases
CAAAACTGCACGGTTATCAACTCAATGATGAATTTTATACTCAATTGGCCAAACACAATATTACACTTCTGCAGCAGGGT
CTCTATGGGGGGAAGCAATA

Downstream 100 bases:

>100_bases
TTGGATTTTTTGTTCGCCATCCCACGGCGACAACACTGCTGATGCTGGCCTTTATTGTGCTGGGTATTAAGGCGCTGCCA
GAGCTTAAGCGGGAGACCTT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Membrane-Fusion Protein; Efflux Transporter RND Family MFP Subunit; HlyD Family Secretion Protein; Auxiliary Transport Protein MFP Family; Acriflavin Resistance Periplasmic Protein

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSAFKGKRWYFFPAVAVGFVVLVLVVKLRSHPPLELQAEPSKLVEVISLEKSPVVAQVDAFGRVSPKIQWQLLPEVGGRV
VYKHPDLAVGKILPQDTLLLAIDPLDYQIRLAQAQADRKALEGQLEGKKLQLKNLQLSLEIENNRYDLVKSDLKRKETLR
KQNLISQSELDGERQNLLAQQQKLQELDNSLNLMPNETQILEAQRLQAVAREQEAQSQLTKTEIRLPFEGRVAEVNVESS
QVVSPQQVLARINGIEVMEVEAQVSLGDVMTLMKTVNRPQEQEKQLPRAETLGLSAEITLKGATYSFSWPAQITRIGETV
DPTLATVSVVLQVEQQYRDLKMGQSPPLVNGMFVSARIKGGERDYWMVPERALHGDKLYIMSQDKRLQLVDVQVLFRQEG
QAAVQGKLIEGMQLVLTDLIPAVNGMALRSQGVDTKAAVPAKGEMLP

Sequences:

>Translated_447_residues
MSAFKGKRWYFFPAVAVGFVVLVLVVKLRSHPPLELQAEPSKLVEVISLEKSPVVAQVDAFGRVSPKIQWQLLPEVGGRV
VYKHPDLAVGKILPQDTLLLAIDPLDYQIRLAQAQADRKALEGQLEGKKLQLKNLQLSLEIENNRYDLVKSDLKRKETLR
KQNLISQSELDGERQNLLAQQQKLQELDNSLNLMPNETQILEAQRLQAVAREQEAQSQLTKTEIRLPFEGRVAEVNVESS
QVVSPQQVLARINGIEVMEVEAQVSLGDVMTLMKTVNRPQEQEKQLPRAETLGLSAEITLKGATYSFSWPAQITRIGETV
DPTLATVSVVLQVEQQYRDLKMGQSPPLVNGMFVSARIKGGERDYWMVPERALHGDKLYIMSQDKRLQLVDVQVLFRQEG
QAAVQGKLIEGMQLVLTDLIPAVNGMALRSQGVDTKAAVPAKGEMLP
>Mature_446_residues
SAFKGKRWYFFPAVAVGFVVLVLVVKLRSHPPLELQAEPSKLVEVISLEKSPVVAQVDAFGRVSPKIQWQLLPEVGGRVV
YKHPDLAVGKILPQDTLLLAIDPLDYQIRLAQAQADRKALEGQLEGKKLQLKNLQLSLEIENNRYDLVKSDLKRKETLRK
QNLISQSELDGERQNLLAQQQKLQELDNSLNLMPNETQILEAQRLQAVAREQEAQSQLTKTEIRLPFEGRVAEVNVESSQ
VVSPQQVLARINGIEVMEVEAQVSLGDVMTLMKTVNRPQEQEKQLPRAETLGLSAEITLKGATYSFSWPAQITRIGETVD
PTLATVSVVLQVEQQYRDLKMGQSPPLVNGMFVSARIKGGERDYWMVPERALHGDKLYIMSQDKRLQLVDVQVLFRQEGQ
AAVQGKLIEGMQLVLTDLIPAVNGMALRSQGVDTKAAVPAKGEMLP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49928; Mature: 49796

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFKGKRWYFFPAVAVGFVVLVLVVKLRSHPPLELQAEPSKLVEVISLEKSPVVAQVDA
CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCCCEEEECC
FGRVSPKIQWQLLPEVGGRVVYKHPDLAVGKILPQDTLLLAIDPLDYQIRLAQAQADRKA
CCCCCCCEEEEEEHHHCCEEEEECCCCHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHH
LEGQLEGKKLQLKNLQLSLEIENNRYDLVKSDLKRKETLRKQNLISQSELDGERQNLLAQ
HCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHH
QQKLQELDNSLNLMPNETQILEAQRLQAVAREQEAQSQLTKTEIRLPFEGRVAEVNVESS
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCHH
QVVSPQQVLARINGIEVMEVEAQVSLGDVMTLMKTVNRPQEQEKQLPRAETLGLSAEITL
HCCCHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCHHHCCCEEEEEE
KGATYSFSWPAQITRIGETVDPTLATVSVVLQVEQQYRDLKMGQSPPLVNGMFVSARIKG
ECCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
GERDYWMVPERALHGDKLYIMSQDKRLQLVDVQVLFRQEGQAAVQGKLIEGMQLVLTDLI
CCCCEEECCHHHCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
PAVNGMALRSQGVDTKAAVPAKGEMLP
HHHCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAFKGKRWYFFPAVAVGFVVLVLVVKLRSHPPLELQAEPSKLVEVISLEKSPVVAQVDA
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCCCEEEECC
FGRVSPKIQWQLLPEVGGRVVYKHPDLAVGKILPQDTLLLAIDPLDYQIRLAQAQADRKA
CCCCCCCEEEEEEHHHCCEEEEECCCCHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHH
LEGQLEGKKLQLKNLQLSLEIENNRYDLVKSDLKRKETLRKQNLISQSELDGERQNLLAQ
HCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHH
QQKLQELDNSLNLMPNETQILEAQRLQAVAREQEAQSQLTKTEIRLPFEGRVAEVNVESS
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCHH
QVVSPQQVLARINGIEVMEVEAQVSLGDVMTLMKTVNRPQEQEKQLPRAETLGLSAEITL
HCCCHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCHHHCCCEEEEEE
KGATYSFSWPAQITRIGETVDPTLATVSVVLQVEQQYRDLKMGQSPPLVNGMFVSARIKG
ECCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
GERDYWMVPERALHGDKLYIMSQDKRLQLVDVQVLFRQEGQAAVQGKLIEGMQLVLTDLI
CCCCEEECCHHHCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
PAVNGMALRSQGVDTKAAVPAKGEMLP
HHHCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA