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The map label for this gene is 167623524

Identifier: 167623524

GI number: 167623524

Start: 1910914

End: 1911600

Strand: Direct

Name: 167623524

Synonym: Shal_1593

Alternate gene names: NA

Gene position: 1910914-1911600 (Clockwise)

Preceding gene: 167623522

Following gene: 167623525

Centisome position: 36.56

GC content: 42.21

Gene sequence:

>687_bases
GTGAAGCAAAAATTCAAGGGGCTAGGATTCTCTTTAGTCATATTCATCGTCATTGTTATCTTCAATTCCCTATTTGGCGC
GCCGCCAATTGCCCTGAGTGGCATCGAAAAATATAGCGATAAAGTCACAATTGATGAGGCGCGAGAGCTCGGCTTTATCT
TGTTTAAGAGTAAGCGTTACTCCGAGGCGAGAGCATTTTTCAAGCCTGCAGCGCAACAAGGCGATGTGGGGAGTCAACTG
TCACTGGCTACTCTCTATTTTTACGATCTTACAGAGAATAATAACTACCAGCAGGCTTATTATAGGTTTAGTAAAAATAG
CGATAATGCCTTCGCTCAATACTATTTAAGCTTGCTGTACCACTTCGGATATTACGTGCCTCAAAGCCAATTAAAATCTC
TATTTTGGCTAGAAAAATCCGCAGCGCAGTCTTTCCCTGCTGCCCAGCATAATTTGGCTGTTTATTATTTTAACCTAGGA
GATTATAGCCAAGCTTATCTGTGGGGACGTTATGCTAGAGATAATGATTTTTCTCAGGCTCGAAGCTTAGTTAAACAAGC
GGCAGGGCATTTAACGCCACAAGAAAAAGCCATTGCTGACAAGACGTATAGAAACAGCAAAGCTGAACATCACTGGGATG
GCAAGAACAATAGTCAGATTGGCGCACTGTTAGAGCAGGTATTTTAA

Upstream 100 bases:

>100_bases
TCTTGCGAGCTAAATTACTCTGTGTCAAACTCCGGTCAATTTCTTCCCTCAAAAATACGCCACTTTTGGTACATTTTGCT
TGTCGATTTGGATAGATAGT

Downstream 100 bases:

>100_bases
CCATGAAGATAAGTTTGCTGTCATTGGAGTTAGCGTCTGGTCAAACTCAAGAGTTTGGGGTAGTGACTAGCCGCACGACC
TTAAAGCATCGGCTCAAGGA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: Tyrosine -Like Repeat Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKQKFKGLGFSLVIFIVIVIFNSLFGAPPIALSGIEKYSDKVTIDEARELGFILFKSKRYSEARAFFKPAAQQGDVGSQL
SLATLYFYDLTENNNYQQAYYRFSKNSDNAFAQYYLSLLYHFGYYVPQSQLKSLFWLEKSAAQSFPAAQHNLAVYYFNLG
DYSQAYLWGRYARDNDFSQARSLVKQAAGHLTPQEKAIADKTYRNSKAEHHWDGKNNSQIGALLEQVF

Sequences:

>Translated_228_residues
MKQKFKGLGFSLVIFIVIVIFNSLFGAPPIALSGIEKYSDKVTIDEARELGFILFKSKRYSEARAFFKPAAQQGDVGSQL
SLATLYFYDLTENNNYQQAYYRFSKNSDNAFAQYYLSLLYHFGYYVPQSQLKSLFWLEKSAAQSFPAAQHNLAVYYFNLG
DYSQAYLWGRYARDNDFSQARSLVKQAAGHLTPQEKAIADKTYRNSKAEHHWDGKNNSQIGALLEQVF
>Mature_228_residues
MKQKFKGLGFSLVIFIVIVIFNSLFGAPPIALSGIEKYSDKVTIDEARELGFILFKSKRYSEARAFFKPAAQQGDVGSQL
SLATLYFYDLTENNNYQQAYYRFSKNSDNAFAQYYLSLLYHFGYYVPQSQLKSLFWLEKSAAQSFPAAQHNLAVYYFNLG
DYSQAYLWGRYARDNDFSQARSLVKQAAGHLTPQEKAIADKTYRNSKAEHHWDGKNNSQIGALLEQVF

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26116; Mature: 26116

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKFKGLGFSLVIFIVIVIFNSLFGAPPIALSGIEKYSDKVTIDEARELGFILFKSKRY
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCEEEEECCCH
SEARAFFKPAAQQGDVGSQLSLATLYFYDLTENNNYQQAYYRFSKNSDNAFAQYYLSLLY
HHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
HFGYYVPQSQLKSLFWLEKSAAQSFPAAQHNLAVYYFNLGDYSQAYLWGRYARDNDFSQA
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCHHHH
RSLVKQAAGHLTPQEKAIADKTYRNSKAEHHWDGKNNSQIGALLEQVF
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MKQKFKGLGFSLVIFIVIVIFNSLFGAPPIALSGIEKYSDKVTIDEARELGFILFKSKRY
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCEEEEECCCH
SEARAFFKPAAQQGDVGSQLSLATLYFYDLTENNNYQQAYYRFSKNSDNAFAQYYLSLLY
HHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
HFGYYVPQSQLKSLFWLEKSAAQSFPAAQHNLAVYYFNLGDYSQAYLWGRYARDNDFSQA
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCHHHH
RSLVKQAAGHLTPQEKAIADKTYRNSKAEHHWDGKNNSQIGALLEQVF
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA