Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623525

Identifier: 167623525

GI number: 167623525

Start: 1911603

End: 1912523

Strand: Direct

Name: 167623525

Synonym: Shal_1594

Alternate gene names: NA

Gene position: 1911603-1912523 (Clockwise)

Preceding gene: 167623524

Following gene: 167623526

Centisome position: 36.57

GC content: 45.82

Gene sequence:

>921_bases
ATGAAGATAAGTTTGCTGTCATTGGAGTTAGCGTCTGGTCAAACTCAAGAGTTTGGGGTAGTGACTAGCCGCACGACCTT
AAAGCATCGGCTCAAGGAGATGCTTGATAGCGTCATATTTGAAGAACCTAGCGTTGATGGGAGTGGCGGTCTCACCATGC
CGATGCTAATCGTACAGGCAAAGGTGAGGCAGTGTGAGATCACTTTCACTTATGATCTGCTCAGTAAAGAAGAGGGGCTA
TTAGCGCTGTTCTATACCGGTGCTAAAGGAGGAATCGAGCGTCAAAAGGAGTTTGGTTTTGTCAGCATTAGCGAACTTGA
TGAGCACCTGCAGCGACTCTTGAGTGAGAGTGAGGACAAATTTATTGAACACTATTTTCCTAAAAAAACGCGCTTTAATC
AGGCGGTCAAATATTTAGGCGTTGCCTATATCACCGCTGCTTGTCTAGGCCTGTTATCCTTTATTTTTTTCAGCGAGTTA
ATCTGGCGTGACGAGTTTTTCCCGTTAGCGTATATCGCTGGCGGCGTAGTCTATACCGTCACACTGCCGATATTGTTGCT
CAAGGCTTTGTCGCAGGAGGGGAGAGAGCGTGCAGAGCAAGTGGGTCAGAGTATGACTAAACAAGTATTTGCCATACTTG
TCGGTAATATAATACTGAGCTTTTCACTCGTTGCTGGTGGCTGTAATTTATGGCACGTTATCAGCGCCAAGGCCACAGAA
CTAGACATTACTTTTTCCGATAAGAACCAAGATTATTGGGGAAAAAACTGTAAGGGTGGCGTCAACTTTGAACACTTTTC
AGGAACTGTGTGTTTGGAAGATAGAGCCTACTGGAAGATTGTCCGTCCCGGCATGCGTGCCATCGCACAGGGGGAGGCAT
CGATTATTGCATTTGATGTTAAAGCCATCGAACTGAAATGA

Upstream 100 bases:

>100_bases
CCATTGCTGACAAGACGTATAGAAACAGCAAAGCTGAACATCACTGGGATGGCAAGAACAATAGTCAGATTGGCGCACTG
TTAGAGCAGGTATTTTAACC

Downstream 100 bases:

>100_bases
TGAGGTTTCAATTGCCTGTCGGTAAATTAATTGCCTGTAACCTGCGAGTCTAAGGAGTAACCATCTTTTCCATAGACGGT
CGCGATTTGTTATTGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKISLLSLELASGQTQEFGVVTSRTTLKHRLKEMLDSVIFEEPSVDGSGGLTMPMLIVQAKVRQCEITFTYDLLSKEEGL
LALFYTGAKGGIERQKEFGFVSISELDEHLQRLLSESEDKFIEHYFPKKTRFNQAVKYLGVAYITAACLGLLSFIFFSEL
IWRDEFFPLAYIAGGVVYTVTLPILLLKALSQEGRERAEQVGQSMTKQVFAILVGNIILSFSLVAGGCNLWHVISAKATE
LDITFSDKNQDYWGKNCKGGVNFEHFSGTVCLEDRAYWKIVRPGMRAIAQGEASIIAFDVKAIELK

Sequences:

>Translated_306_residues
MKISLLSLELASGQTQEFGVVTSRTTLKHRLKEMLDSVIFEEPSVDGSGGLTMPMLIVQAKVRQCEITFTYDLLSKEEGL
LALFYTGAKGGIERQKEFGFVSISELDEHLQRLLSESEDKFIEHYFPKKTRFNQAVKYLGVAYITAACLGLLSFIFFSEL
IWRDEFFPLAYIAGGVVYTVTLPILLLKALSQEGRERAEQVGQSMTKQVFAILVGNIILSFSLVAGGCNLWHVISAKATE
LDITFSDKNQDYWGKNCKGGVNFEHFSGTVCLEDRAYWKIVRPGMRAIAQGEASIIAFDVKAIELK
>Mature_306_residues
MKISLLSLELASGQTQEFGVVTSRTTLKHRLKEMLDSVIFEEPSVDGSGGLTMPMLIVQAKVRQCEITFTYDLLSKEEGL
LALFYTGAKGGIERQKEFGFVSISELDEHLQRLLSESEDKFIEHYFPKKTRFNQAVKYLGVAYITAACLGLLSFIFFSEL
IWRDEFFPLAYIAGGVVYTVTLPILLLKALSQEGRERAEQVGQSMTKQVFAILVGNIILSFSLVAGGCNLWHVISAKATE
LDITFSDKNQDYWGKNCKGGVNFEHFSGTVCLEDRAYWKIVRPGMRAIAQGEASIIAFDVKAIELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34197; Mature: 34197

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISLLSLELASGQTQEFGVVTSRTTLKHRLKEMLDSVIFEEPSVDGSGGLTMPMLIVQA
CEEEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
KVRQCEITFTYDLLSKEEGLLALFYTGAKGGIERQKEFGFVSISELDEHLQRLLSESEDK
HHHHEEEEEEEEHHCCCCCEEEEEEECCCCCCCHHHHCCCEEHHHHHHHHHHHHHCCHHH
FIEHYFPKKTRFNQAVKYLGVAYITAACLGLLSFIFFSELIWRDEFFPLAYIAGGVVYTV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH
TLPILLLKALSQEGRERAEQVGQSMTKQVFAILVGNIILSFSLVAGGCNLWHVISAKATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEE
LDITFSDKNQDYWGKNCKGGVNFEHFSGTVCLEDRAYWKIVRPGMRAIAQGEASIIAFDV
EEEEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE
KAIELK
EEEEEC
>Mature Secondary Structure
MKISLLSLELASGQTQEFGVVTSRTTLKHRLKEMLDSVIFEEPSVDGSGGLTMPMLIVQA
CEEEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
KVRQCEITFTYDLLSKEEGLLALFYTGAKGGIERQKEFGFVSISELDEHLQRLLSESEDK
HHHHEEEEEEEEHHCCCCCEEEEEEECCCCCCCHHHHCCCEEHHHHHHHHHHHHHCCHHH
FIEHYFPKKTRFNQAVKYLGVAYITAACLGLLSFIFFSELIWRDEFFPLAYIAGGVVYTV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH
TLPILLLKALSQEGRERAEQVGQSMTKQVFAILVGNIILSFSLVAGGCNLWHVISAKATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEE
LDITFSDKNQDYWGKNCKGGVNFEHFSGTVCLEDRAYWKIVRPGMRAIAQGEASIIAFDV
EEEEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE
KAIELK
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA