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The map label for this gene is fdx [H]

Identifier: 167623508

GI number: 167623508

Start: 1895247

End: 1895582

Strand: Direct

Name: fdx [H]

Synonym: Shal_1577

Alternate gene names: 167623508

Gene position: 1895247-1895582 (Clockwise)

Preceding gene: 167623507

Following gene: 167623509

Centisome position: 36.26

GC content: 43.45

Gene sequence:

>336_bases
ATGCCACAAATTGTATTTTTACCCCATGAAGAGTTATGCCCAGATGGAGCCGTTGTTGAAGCAAACGAAGGCGAAACTGT
TTTAGACGTTGCACTGCGTAACGGTATTCATATTGAGCATGCATGTGAAAAATCATGTGCTTGTACTACCTGTCACGTCG
TGATCCGTGAAGGCTTTGACGAGCTAGAAGAAAGCGATGAGCTAGAAGATGATATGCTCGATAAAGCTTGGGGTTTAGAG
CCTGAAAGCCGCCTTTCTTGCCAAGCAAAAGTGCCAGCTTCAGATATCGTCGTTGATATCCCTAAATACACGATTAATAT
GGTTAGTGAAGGCTAA

Upstream 100 bases:

>100_bases
TACTAGATACAGCGACGCAGGACTTTGCTGCTAAGCGTATGGATAATTCAATCCGATTGGCTCTTAAAGGGCAGTCGGTT
GACAATATATAGGTAAGGTT

Downstream 100 bases:

>100_bases
TCACGCTAAGCGTTTATACAAACTCAAGCGTATTTATAAAAGCCAGTAGCCAAGTCTACTGGCTTTTTTGTTTTCAGTTT
TCTAGGTGCTCAGTCGTTAG

Product: ferredoxin, 2Fe-2S type, ISC system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPQIVFLPHEELCPDGAVVEANEGETVLDVALRNGIHIEHACEKSCACTTCHVVIREGFDELEESDELEDDMLDKAWGLE
PESRLSCQAKVPASDIVVDIPKYTINMVSEG

Sequences:

>Translated_111_residues
MPQIVFLPHEELCPDGAVVEANEGETVLDVALRNGIHIEHACEKSCACTTCHVVIREGFDELEESDELEDDMLDKAWGLE
PESRLSCQAKVPASDIVVDIPKYTINMVSEG
>Mature_110_residues
PQIVFLPHEELCPDGAVVEANEGETVLDVALRNGIHIEHACEKSCACTTCHVVIREGFDELEESDELEDDMLDKAWGLEP
ESRLSCQAKVPASDIVVDIPKYTINMVSEG

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Although the function of this ferredoxin is unknown it is probable that it has a role as a cellular electron transfer protein. Involved in the in vivo as

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=96, Percent_Identity=41.6666666666667, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=76.3636363636364, Blast_Score=181, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17544202, Length=96, Percent_Identity=40.625, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6325004, Length=110, Percent_Identity=42.7272727272727, Blast_Score=74, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24661503, Length=96, Percent_Identity=42.7083333333333, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12226; Mature: 12095

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIVFLPHEELCPDGAVVEANEGETVLDVALRNGIHIEHACEKSCACTTCHVVIREGFD
CCEEEECCCHHHCCCCCEEECCCCCEEEEEHHHCCCCCHHHHCCCCCHHHHHHHHHHCHH
ELEESDELEDDMLDKAWGLEPESRLSCQAKVPASDIVVDIPKYTINMVSEG
HHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECCCEEEEEECCC
>Mature Secondary Structure 
PQIVFLPHEELCPDGAVVEANEGETVLDVALRNGIHIEHACEKSCACTTCHVVIREGFD
CEEEECCCHHHCCCCCEEECCCCCEEEEEHHHCCCCCHHHHCCCCCHHHHHHHHHHCHH
ELEESDELEDDMLDKAWGLEPESRLSCQAKVPASDIVVDIPKYTINMVSEG
HHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]