Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is iscX [H]

Identifier: 167623509

GI number: 167623509

Start: 1895855

End: 1896052

Strand: Direct

Name: iscX [H]

Synonym: Shal_1578

Alternate gene names: 167623509

Gene position: 1895855-1896052 (Clockwise)

Preceding gene: 167623508

Following gene: 167623510

Centisome position: 36.27

GC content: 40.4

Gene sequence:

>198_bases
ATGAAGCTTAAGTGGATAGATTCGTTAGAGATTGCACTGCAACTCATTGATAAGTACCCCGACGTTGAGCCTGAAAAAAT
CCGCTTCACCGATCTTAATGAATGGGTATTAGGCCTTGAGTGTTTTGATGACGATCCAAATCATTGCAATGAAAGAATAC
TTGAGGCGATTCAAGCCAATTGGATTGCTGAAAAGTGA

Upstream 100 bases:

>100_bases
GGGCTCATACAGAGCGTCAATCATTGAGGGTAGCTATTGTACGAGCGAGTCGCTATCTATGTTTTATACTTAATTAAGTT
TGACTAAAAGGAGAGCCGTT

Downstream 100 bases:

>100_bases
ATTTCTGTGGTCAGATAGTGGTTAAAGTGTGACCCTTGCCTTATCTGACTTCTTTGGTGAACATAATTCTGCCTTGGGTT
GATCCGTATCAAAAGGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MKLKWIDSLEIALQLIDKYPDVEPEKIRFTDLNEWVLGLECFDDDPNHCNERILEAIQANWIAEK

Sequences:

>Translated_65_residues
MKLKWIDSLEIALQLIDKYPDVEPEKIRFTDLNEWVLGLECFDDDPNHCNERILEAIQANWIAEK
>Mature_65_residues
MKLKWIDSLEIALQLIDKYPDVEPEKIRFTDLNEWVLGLECFDDDPNHCNERILEAIQANWIAEK

Specific function: May function as iron donor in the assembly of iron- sulfur clusters [H]

COG id: COG2975

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iscX family [H]

Homologues:

Organism=Escherichia coli, GI1788873, Length=64, Percent_Identity=54.6875, Blast_Score=75, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007479 [H]

Pfam domain/function: PF04384 DUF528 [H]

EC number: NA

Molecular weight: Translated: 7730; Mature: 7730

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKWIDSLEIALQLIDKYPDVEPEKIRFTDLNEWVLGLECFDDDPNHCNERILEAIQAN
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
WIAEK
CCCCC
>Mature Secondary Structure
MKLKWIDSLEIALQLIDKYPDVEPEKIRFTDLNEWVLGLECFDDDPNHCNERILEAIQAN
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
WIAEK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]