Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is phhB
Identifier: 167623463
GI number: 167623463
Start: 1847656
End: 1847994
Strand: Direct
Name: phhB
Synonym: Shal_1532
Alternate gene names: NA
Gene position: 1847656-1847994 (Clockwise)
Preceding gene: 167623462
Following gene: 167623464
Centisome position: 35.35
GC content: 42.48
Gene sequence:
>339_bases ATGACAGAATTAGCCCAGATGAAATGCGAAGCCTGCCAAGCTGATGCACCTAAAGTGACAGATGACGAATTGGCTCAACT GATCGCAAAGATCCCTGATTGGGGAGTCGAGGTGCGTGATGGTATTATGCAGTTAGAGCGCGTTTATAAGTTTAAGAATT TCAAGTTGGCGATGGCGTTCACTAATAAGTTGGCTGATTTAGCCGAAGCTGATTTTCATCATCCTGGAATTTTAACGGAA TGGGGAAAAGTGACTGTCACTTGGTGGTCGCATTCAATAAAAGGTCTACATAAAAATGATTTTATTATGGCAGCGAAAAC CGACACGCTGTTAGATTAG
Upstream 100 bases:
>100_bases ACCGACATTCCCAGCTAAAGCGGGTTAAGTAAAGAATCAGCCTTCAAATATTGAATGCTGAGTATTGAATAATAAATAAC GAATCATTAAAGGAATAAAA
Downstream 100 bases:
>100_bases AAAAGTGTTTAAGAGAACCTTGTTGGTCTTTCCTTGTAAAATGTTACAAAACCACTGTAAACAAGCCTTGCCACAGCAAA GATAAACTTCTAACGTATAG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTELAQMKCEACQADAPKVTDDELAQLIAKIPDWGVEVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEADFHHPGILTE WGKVTVTWWSHSIKGLHKNDFIMAAKTDTLLD
Sequences:
>Translated_112_residues MTELAQMKCEACQADAPKVTDDELAQLIAKIPDWGVEVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEADFHHPGILTE WGKVTVTWWSHSIKGLHKNDFIMAAKTDTLLD >Mature_111_residues TELAQMKCEACQADAPKVTDDELAQLIAKIPDWGVEVRDGIMQLERVYKFKNFKLAMAFTNKLADLAEADFHHPGILTEW GKVTVTWWSHSIKGLHKNDFIMAAKTDTLLD
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_SHEHH (B0TNB2)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673757.1 - ProteinModelPortal: B0TNB2 - SMR: B0TNB2 - GeneID: 5903329 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1532 - HOGENOM: HBG705804 - OMA: ILTEWGK - ProtClustDB: PRK00823 - BioCyc: SHAL458817:SHAL_1532-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 12707; Mature: 12576
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELAQMKCEACQADAPKVTDDELAQLIAKIPDWGVEVRDGIMQLERVYKFKNFKLAMAF CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEHHHH TNKLADLAEADFHHPGILTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDTLLD HHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure TELAQMKCEACQADAPKVTDDELAQLIAKIPDWGVEVRDGIMQLERVYKFKNFKLAMAF CHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEHHHH TNKLADLAEADFHHPGILTEWGKVTVTWWSHSIKGLHKNDFIMAAKTDTLLD HHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA