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The map label for this gene is ugd [H]

Identifier: 167623432

GI number: 167623432

Start: 1805885

End: 1807054

Strand: Direct

Name: ugd [H]

Synonym: Shal_1501

Alternate gene names: 167623432

Gene position: 1805885-1807054 (Clockwise)

Preceding gene: 167623430

Following gene: 167623433

Centisome position: 34.55

GC content: 42.48

Gene sequence:

>1170_bases
ATGATGAAAATTGCTATAGCAGGTACAGGCTATGTTGGTCTGTCAAACGCAGTATTATTGGCGCAAAAAAACACAGTCGT
GGCTGTTGATATTATCGCCGAAAAAGTTGAGATGATTAACCAAGGTTGCTCACCTATAGCCGATGCAGAGATAGAAGATT
ATCTGAGTAACCATAAACTTGATTTAACCGCTACGTTAGATAAACAGTTAGCGTATCAAGATGCAGACTATGTGGTTATT
GCCACACCTACCGATTACGATACCCATTCTAACTACTTTAATACTTCTTCGGTTGAGGCGGTAATTCAAGATGTGTTAGC
TATTAATCCTAGCGCGGTGATGGTGATTAAATCTACCGTGCCGGTTGGCTATACAGAGTCCGTTAAGCAAAAATTTAACA
CTCAGAATATTATCTTCTCGCCGGAATTTCTGCGCGAAGGTCGTGCCTTATACGACAATCTACATCCTTCACGGATCATT
ATCGGTGAGCGCTCTGAGCGCGCTAGCGTATTTGCTAACTTACTTAGCGATGCTGCGATTAAACAGAATATCGATATTCT
TTATACCGACTCGACCGAAGCTGAGGCGGTTAAGCTTTTTTCTAATACTTACCTTGCAATGCGAGTCGCTTATTTCAATG
AATTAGACAGCTATGCAGAGTCCCATGGCTTAGACTCACGCCAAATTATTGAAGGTGTAGGCCTTGACCCGCGTATTGGC
AATCACTACAACAATCCATCTTTTGGTTACGGTGGTTATTGTTTGCCAAAAGACACTAAGCAACTGCGTGCAAACTATCA
GAATGTGCCTAACAGCTTGATTAGCGCGATTGTCGATGCCAACTCTACCCGTAAAGACTTTATTGCCGACTCTATAATTA
ACAAGCAGCCAAAAGTCGTTGGTATCTACCGCTTAATCATGAAGTCGGGTTCCGATAACTTCCGCGCATCGTCTATTCAA
GGCATTATGAAGCGCATTAAAGCCAAGGGTATTGAGGTTGTGGTTTTTGAGCCAGTGCTAAATGAGCCAGAGTTTTTTAA
TTCTCGCGTAATGCAAGACCTCAACGAATTTAAGCAGATTTCAGATGTCATAGTGTCAAACCGAATGGTTGACGAGCTGG
CAGATGTCGCTGCTAAAGTTTATACACGCGATCTGTTTGGATCGGATTGA

Upstream 100 bases:

>100_bases
CTCTTCGCTTGTTCCTTCTTAGCTTTAACAAATGTGAGTCCATAACAAGACTTTGTTGTTGTTGAGTGTTATTTTACACC
GACAATGTTTTGCTGGTTTT

Downstream 100 bases:

>100_bases
TTTTAAAGCGAAGAAGAGCGCTACGCTTCTAGGACGTGACTTCGTCACTACGAGAGCGTCGCTATGCTCCTTCTAGGTTC
TAGGAAAAGCAGGTACTAGG

Product: UDP-glucose/GDP-mannose dehydrogenase

Products: NA

Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MMKIAIAGTGYVGLSNAVLLAQKNTVVAVDIIAEKVEMINQGCSPIADAEIEDYLSNHKLDLTATLDKQLAYQDADYVVI
ATPTDYDTHSNYFNTSSVEAVIQDVLAINPSAVMVIKSTVPVGYTESVKQKFNTQNIIFSPEFLREGRALYDNLHPSRII
IGERSERASVFANLLSDAAIKQNIDILYTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAESHGLDSRQIIEGVGLDPRIG
NHYNNPSFGYGGYCLPKDTKQLRANYQNVPNSLISAIVDANSTRKDFIADSIINKQPKVVGIYRLIMKSGSDNFRASSIQ
GIMKRIKAKGIEVVVFEPVLNEPEFFNSRVMQDLNEFKQISDVIVSNRMVDELADVAAKVYTRDLFGSD

Sequences:

>Translated_389_residues
MMKIAIAGTGYVGLSNAVLLAQKNTVVAVDIIAEKVEMINQGCSPIADAEIEDYLSNHKLDLTATLDKQLAYQDADYVVI
ATPTDYDTHSNYFNTSSVEAVIQDVLAINPSAVMVIKSTVPVGYTESVKQKFNTQNIIFSPEFLREGRALYDNLHPSRII
IGERSERASVFANLLSDAAIKQNIDILYTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAESHGLDSRQIIEGVGLDPRIG
NHYNNPSFGYGGYCLPKDTKQLRANYQNVPNSLISAIVDANSTRKDFIADSIINKQPKVVGIYRLIMKSGSDNFRASSIQ
GIMKRIKAKGIEVVVFEPVLNEPEFFNSRVMQDLNEFKQISDVIVSNRMVDELADVAAKVYTRDLFGSD
>Mature_389_residues
MMKIAIAGTGYVGLSNAVLLAQKNTVVAVDIIAEKVEMINQGCSPIADAEIEDYLSNHKLDLTATLDKQLAYQDADYVVI
ATPTDYDTHSNYFNTSSVEAVIQDVLAINPSAVMVIKSTVPVGYTESVKQKFNTQNIIFSPEFLREGRALYDNLHPSRII
IGERSERASVFANLLSDAAIKQNIDILYTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAESHGLDSRQIIEGVGLDPRIG
NHYNNPSFGYGGYCLPKDTKQLRANYQNVPNSLISAIVDANSTRKDFIADSIINKQPKVVGIYRLIMKSGSDNFRASSIQ
GIMKRIKAKGIEVVVFEPVLNEPEFFNSRVMQDLNEFKQISDVIVSNRMVDELADVAAKVYTRDLFGSD

Specific function: Unknown

COG id: COG1004

COG function: function code M; Predicted UDP-glucose 6-dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507813, Length=409, Percent_Identity=25.6723716381418, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI296040438, Length=292, Percent_Identity=27.7397260273973, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI296040443, Length=258, Percent_Identity=26.7441860465116, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788340, Length=388, Percent_Identity=75, Blast_Score=612, Evalue=1e-176,
Organism=Escherichia coli, GI48994968, Length=402, Percent_Identity=23.6318407960199, Blast_Score=75, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17560350, Length=377, Percent_Identity=26.525198938992, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI17136908, Length=373, Percent_Identity=26.8096514745308, Blast_Score=115, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR016040
- InterPro:   IPR017476
- InterPro:   IPR014027
- InterPro:   IPR014026
- InterPro:   IPR014028
- InterPro:   IPR001732 [H]

Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]

EC number: =1.1.1.22 [H]

Molecular weight: Translated: 43131; Mature: 43131

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIAIAGTGYVGLSNAVLLAQKNTVVAVDIIAEKVEMINQGCSPIADAEIEDYLSNHKL
CEEEEEECCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCE
DLTATLDKQLAYQDADYVVIATPTDYDTHSNYFNTSSVEAVIQDVLAINPSAVMVIKSTV
EEEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECC
PVGYTESVKQKFNTQNIIFSPEFLREGRALYDNLHPSRIIIGERSERASVFANLLSDAAI
CCCCHHHHHHHCCCCCEEECHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH
KQNIDILYTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAESHGLDSRQIIEGVGLDPRIG
HCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
NHYNNPSFGYGGYCLPKDTKQLRANYQNVPNSLISAIVDANSTRKDFIADSIINKQPKVV
CCCCCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH
GIYRLIMKSGSDNFRASSIQGIMKRIKAKGIEVVVFEPVLNEPEFFNSRVMQDLNEFKQI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SDVIVSNRMVDELADVAAKVYTRDLFGSD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKIAIAGTGYVGLSNAVLLAQKNTVVAVDIIAEKVEMINQGCSPIADAEIEDYLSNHKL
CEEEEEECCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCE
DLTATLDKQLAYQDADYVVIATPTDYDTHSNYFNTSSVEAVIQDVLAINPSAVMVIKSTV
EEEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECC
PVGYTESVKQKFNTQNIIFSPEFLREGRALYDNLHPSRIIIGERSERASVFANLLSDAAI
CCCCHHHHHHHCCCCCEEECHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH
KQNIDILYTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAESHGLDSRQIIEGVGLDPRIG
HCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
NHYNNPSFGYGGYCLPKDTKQLRANYQNVPNSLISAIVDANSTRKDFIADSIINKQPKVV
CCCCCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH
GIYRLIMKSGSDNFRASSIQGIMKRIKAKGIEVVVFEPVLNEPEFFNSRVMQDLNEFKQI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SDVIVSNRMVDELADVAAKVYTRDLFGSD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]