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The map label for this gene is yraQ [C]

Identifier: 167622430

GI number: 167622430

Start: 589949

End: 591298

Strand: Direct

Name: yraQ [C]

Synonym: Shal_0490

Alternate gene names: 167622430

Gene position: 589949-591298 (Clockwise)

Preceding gene: 167622429

Following gene: 167622431

Centisome position: 11.29

GC content: 48.52

Gene sequence:

>1350_bases
ATGTTATTTGAAAACTTTATTGAGCTGTTTCTAGAGTCCGCGCCTTGGTTGTTACTGGGCTTAGTATTAGCAGGCATGTT
GAAAATGTTCGTGCCAATGGTCTGGATGCAAAAGCAGCTAGGCGGTCACGGTTTTAAAACCACGGTTAAGGCTGCGATAC
TTGGCGCACCTTTACCCCTGTGTTCTTGTGGGGTTATTCCTGCGGCAGTGGGCTTGCGTCGTAGCGGTGCATCGAAAGCC
GCGACAACTTCATTTTTAGTGTCTACGCCTGAAACTGGTGTGGATTCGGTGACAGTTTCATATGTACTTCTCGGTCCATT
TATGGCGATAGTGAGACCGATTGCGGCGGTGATCAGTGCCATCGTAGCGGGCTTATTGGTTGGTCGTGATGACGATGATG
GAAAGCCTGTTGTTAGTGAGCAGGCTAAGGCAGGAGCCGCCCCAAAATCTGAGTCTGCCGCATCTTGCTGTAGCAGTAAA
AAATCAGCGCCAAAAGTGGAGCCCGTTGCCTCATGTTGTAGCAATAACAAGGGCGAGGCTAAAGTGGAGCCAGTAGCTTC
ATGTTGTAGTAGCAAAAAAGTTGAGTATAAAGCAGAGAAAGCATCGTGCTGCTCAAGTAAAAAAGCACCAGCTGTTGAGG
CCGTAGTTGCTGAAAAGTCATCCTGTTGTAGCAGTAAAAAAGCCGAGTCTTCCAGCCATGTACATGGTCAGGCTGACACT
GAAGCGGAAGGCTGCTGCGAGTCCACCAGAGATATCGCCACAGAATTAAAGGGCACCTCTGTTATTAGCCGAATTGGTAA
AGGTTTACATTATGCGGCGACCGATCTTGTGCGTGATACCACCATTTGGTTGTTGATAGGTCTATTCTTCGCTGCACTGG
TACAAACTTACGTACCGGCTGACTTTATGGCGAAGTGGGGTGATGGCATACTCGCCATGCTAGTGATGGTGCTTATCTCT
GTGCCTATGTATATCTGTGCGACGGCATCAACGCCTATCGCGGCAGGCCTGCTATTAGCGGGTGTATCTCCTGGTGCGGT
ATTGGTATTTATGCTGGCAGGTCCAGCAACGAACATTGCAACGCTTGGCGTGGTGACTAAAGAGCTCGGTAAGCGTGCGC
TCTATGGCTATTTGGGCGGTGTATTAGGCGTGGCATTAGTGTCAGGCATATTGGTTAACTACTTAGTGGATACTTTTGGT
TTTGTGGTGATGCCACAAATTGGTGAGCAGCATGAGTTATTACCGGCTGGCATCGTTTACACCTCTGGTGTGATACTTGC
GATACTAATGGCTAAAGTCTTCTTGGATAAGCTTCCTAAAAACTGGTGGCGCCGAGATTGCTGTTCATAA

Upstream 100 bases:

>100_bases
AAAATGACAAGCATCGTCACGGTGAGCAAGAGTTCACTAAGACCTGCAGTGATAAATCGATAGCTAAATCGATAACGAAG
AAAACACACGAGAAGTAGTT

Downstream 100 bases:

>100_bases
ATAGAATTATACTGATTGGTATTAAACAACCTTTGCAGGGAGTTGTTTGGTAAGGTAAAAGGCACTCATTTGAGTGCCTT
TTTGTTTTTGGGCTAATATG

Product: permease

Products: NA

Alternate protein names: Permease Family

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MLFENFIELFLESAPWLLLGLVLAGMLKMFVPMVWMQKQLGGHGFKTTVKAAILGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVISAIVAGLLVGRDDDDGKPVVSEQAKAGAAPKSESAASCCSSK
KSAPKVEPVASCCSNNKGEAKVEPVASCCSSKKVEYKAEKASCCSSKKAPAVEAVVAEKSSCCSSKKAESSSHVHGQADT
EAEGCCESTRDIATELKGTSVISRIGKGLHYAATDLVRDTTIWLLIGLFFAALVQTYVPADFMAKWGDGILAMLVMVLIS
VPMYICATASTPIAAGLLLAGVSPGAVLVFMLAGPATNIATLGVVTKELGKRALYGYLGGVLGVALVSGILVNYLVDTFG
FVVMPQIGEQHELLPAGIVYTSGVILAILMAKVFLDKLPKNWWRRDCCS

Sequences:

>Translated_449_residues
MLFENFIELFLESAPWLLLGLVLAGMLKMFVPMVWMQKQLGGHGFKTTVKAAILGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVISAIVAGLLVGRDDDDGKPVVSEQAKAGAAPKSESAASCCSSK
KSAPKVEPVASCCSNNKGEAKVEPVASCCSSKKVEYKAEKASCCSSKKAPAVEAVVAEKSSCCSSKKAESSSHVHGQADT
EAEGCCESTRDIATELKGTSVISRIGKGLHYAATDLVRDTTIWLLIGLFFAALVQTYVPADFMAKWGDGILAMLVMVLIS
VPMYICATASTPIAAGLLLAGVSPGAVLVFMLAGPATNIATLGVVTKELGKRALYGYLGGVLGVALVSGILVNYLVDTFG
FVVMPQIGEQHELLPAGIVYTSGVILAILMAKVFLDKLPKNWWRRDCCS
>Mature_449_residues
MLFENFIELFLESAPWLLLGLVLAGMLKMFVPMVWMQKQLGGHGFKTTVKAAILGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVISAIVAGLLVGRDDDDGKPVVSEQAKAGAAPKSESAASCCSSK
KSAPKVEPVASCCSNNKGEAKVEPVASCCSSKKVEYKAEKASCCSSKKAPAVEAVVAEKSSCCSSKKAESSSHVHGQADT
EAEGCCESTRDIATELKGTSVISRIGKGLHYAATDLVRDTTIWLLIGLFFAALVQTYVPADFMAKWGDGILAMLVMVLIS
VPMYICATASTPIAAGLLLAGVSPGAVLVFMLAGPATNIATLGVVTKELGKRALYGYLGGVLGVALVSGILVNYLVDTFG
FVVMPQIGEQHELLPAGIVYTSGVILAILMAKVFLDKLPKNWWRRDCCS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46850; Mature: 46850

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA