| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cat2 [H]
Identifier: 167622336
GI number: 167622336
Start: 463660
End: 464946
Strand: Direct
Name: cat2 [H]
Synonym: Shal_0396
Alternate gene names: 167622336
Gene position: 463660-464946 (Clockwise)
Preceding gene: 167622335
Following gene: 167622338
Centisome position: 8.87
GC content: 48.56
Gene sequence:
>1287_bases ATGGCGCCAATTATCTGTGGCAGTGCTCTAGAGGCTGTATCTTTAATTGAGAGTGGTGAGACGTTATGGACTCACTCAAT GGGAGCGACTCCGACCCTATTACTCAATGCCCTCGCTGAGCATGCTTTAACCAAAAAAGATCTCACTCTATTACAGTTAC ATACCGAATGTGCTGAGTCGTTAAGTGATGAAAAGCTTAAGGGGCACCTACGACACCGGTGTTTCTTTGGTGGTTTGCCA ACACGTTTGCTATTGCAGCAGGGTGATGCCGATTATGTGCCTATTTTTCTCTCTGAAGTACCTAAGCTATTTCGTTCGGG TGAGCAGCCAATTGATACCGCAATTATTCAAGTCTCTCCTCCCGATAAGCATGGGATCTGTTCATTAGGCATTTCGGTTG AAGCAACCTTAGCAGCCTGTCAAATGGCGGGAAAGATTATTGCTCATATCAACCCACAGATGCCGAGAACCCACGGCGAT GGCTTTATCCATTACAGTAAATTTACTGCTGTTTATGAGCAGAGCATGCCACTGCCGCAGCACCCATTAGCCGCGAGCGA TCAAACGAGTTTAGCTATCGGTAAAAATGTAGCCCAGTTAGTGCGTGATGGAGATTGTCTGCAGATGGGAATTGGGGCAA TTCCTGATGCCGTACTCTCATGTTTAACTGAGCATAAAGATCTTGGCGTACATACCGAATTATTCTCCGATGGTGTGCTT AACTTAGTCGAACTCGGGGTGATCACTAATCGCTTTAAAAAAGTGCATCCAGGCAAAACGGTCACCGGATTTGCCCTCGG AAGCCAGCGGCTATATGACTTTGTTGACGATAACCCTTCGGTGATCTTTATGGATATTGAACAGGTTAATGACACCGCTA TCATTCGTAAAAACCCCAATGTAATGGCCATTAACTCAGCGCTGCAGGTGGATATTTCAGGGCAAATCTGTGCAGATTCT CTGGGCACGCGTATTTACTCTGGAGTGGGAGGGCAGATGGACTTTATTCGCGGAGCTGGGCTATCAGAAGGGGGTCGCTC AGTGATAGCATTACCCAGCACTGCTGCTAGGGGCTCGGTATCGCGAATCGCCACCGTCTTGTCTCCAGGCGCTGGAGTGG TGACCACACGCGCTCATGTGCACTATATAGTGACGGAGTTTGGTATTGCCAATCTGCGAGGCAAGTCCCTGCGTGAGCGC GCGCGGGCACTGATCGATATCGCTCACCCAGACTTTAGAGAGCTGCTATGCCGAGAGACTTTTGATATGTGGGGCTTAAC GGTGTAA
Upstream 100 bases:
>100_bases TGGTATGAGATCAAATTTAAGTTAACTGAGTGTTTAAGCACTGTTAAAGCAAGACGTAACCTCATACACTGCGAACAGAT TAATTATATTAGGTATCATT
Downstream 100 bases:
>100_bases TCACTTAACTGTTTTGTTGCTGAGGTGAGTTAGGCATGCTGTTATCTGATACCGAACGCTTATCTCAATTCAGTGTTTAG TTACAGCTTACACAAGGTAA
Product: acetyl-CoA hydrolase/transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MAPIICGSALEAVSLIESGETLWTHSMGATPTLLLNALAEHALTKKDLTLLQLHTECAESLSDEKLKGHLRHRCFFGGLP TRLLLQQGDADYVPIFLSEVPKLFRSGEQPIDTAIIQVSPPDKHGICSLGISVEATLAACQMAGKIIAHINPQMPRTHGD GFIHYSKFTAVYEQSMPLPQHPLAASDQTSLAIGKNVAQLVRDGDCLQMGIGAIPDAVLSCLTEHKDLGVHTELFSDGVL NLVELGVITNRFKKVHPGKTVTGFALGSQRLYDFVDDNPSVIFMDIEQVNDTAIIRKNPNVMAINSALQVDISGQICADS LGTRIYSGVGGQMDFIRGAGLSEGGRSVIALPSTAARGSVSRIATVLSPGAGVVTTRAHVHYIVTEFGIANLRGKSLRER ARALIDIAHPDFRELLCRETFDMWGLTV
Sequences:
>Translated_428_residues MAPIICGSALEAVSLIESGETLWTHSMGATPTLLLNALAEHALTKKDLTLLQLHTECAESLSDEKLKGHLRHRCFFGGLP TRLLLQQGDADYVPIFLSEVPKLFRSGEQPIDTAIIQVSPPDKHGICSLGISVEATLAACQMAGKIIAHINPQMPRTHGD GFIHYSKFTAVYEQSMPLPQHPLAASDQTSLAIGKNVAQLVRDGDCLQMGIGAIPDAVLSCLTEHKDLGVHTELFSDGVL NLVELGVITNRFKKVHPGKTVTGFALGSQRLYDFVDDNPSVIFMDIEQVNDTAIIRKNPNVMAINSALQVDISGQICADS LGTRIYSGVGGQMDFIRGAGLSEGGRSVIALPSTAARGSVSRIATVLSPGAGVVTTRAHVHYIVTEFGIANLRGKSLRER ARALIDIAHPDFRELLCRETFDMWGLTV >Mature_427_residues APIICGSALEAVSLIESGETLWTHSMGATPTLLLNALAEHALTKKDLTLLQLHTECAESLSDEKLKGHLRHRCFFGGLPT RLLLQQGDADYVPIFLSEVPKLFRSGEQPIDTAIIQVSPPDKHGICSLGISVEATLAACQMAGKIIAHINPQMPRTHGDG FIHYSKFTAVYEQSMPLPQHPLAASDQTSLAIGKNVAQLVRDGDCLQMGIGAIPDAVLSCLTEHKDLGVHTELFSDGVLN LVELGVITNRFKKVHPGKTVTGFALGSQRLYDFVDDNPSVIFMDIEQVNDTAIIRKNPNVMAINSALQVDISGQICADSL GTRIYSGVGGQMDFIRGAGLSEGGRSVIALPSTAARGSVSRIATVLSPGAGVVTTRAHVHYIVTEFGIANLRGKSLRERA RALIDIAHPDFRELLCRETFDMWGLTV
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=384, Percent_Identity=28.125, Blast_Score=92, Evalue=8e-20, Organism=Caenorhabditis elegans, GI32563853, Length=422, Percent_Identity=47.8672985781991, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17538151, Length=426, Percent_Identity=43.1924882629108, Blast_Score=344, Evalue=4e-95, Organism=Saccharomyces cerevisiae, GI6319456, Length=472, Percent_Identity=24.364406779661, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI21358615, Length=417, Percent_Identity=47.9616306954436, Blast_Score=387, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 46074; Mature: 45942
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPIICGSALEAVSLIESGETLWTHSMGATPTLLLNALAEHALTKKDLTLLQLHTECAES CCCEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LSDEKLKGHLRHRCFFGGLPTRLLLQQGDADYVPIFLSEVPKLFRSGEQPIDTAIIQVSP HCHHHHHHHHHHHHEECCCCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEECC PDKHGICSLGISVEATLAACQMAGKIIAHINPQMPRTHGDGFIHYSKFTAVYEQSMPLPQ CCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCC HPLAASDQTSLAIGKNVAQLVRDGDCLQMGIGAIPDAVLSCLTEHKDLGVHTELFSDGVL CCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCHHH NLVELGVITNRFKKVHPGKTVTGFALGSQRLYDFVDDNPSVIFMDIEQVNDTAIIRKNPN HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCC VMAINSALQVDISGQICADSLGTRIYSGVGGQMDFIRGAGLSEGGRSVIALPSTAARGSV EEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCHH SRIATVLSPGAGVVTTRAHVHYIVTEFGIANLRGKSLRERARALIDIAHPDFRELLCRET HHHHHHHCCCCCEEEEHHHEEEEEECCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHH FDMWGLTV HHHCCCCC >Mature Secondary Structure APIICGSALEAVSLIESGETLWTHSMGATPTLLLNALAEHALTKKDLTLLQLHTECAES CCEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LSDEKLKGHLRHRCFFGGLPTRLLLQQGDADYVPIFLSEVPKLFRSGEQPIDTAIIQVSP HCHHHHHHHHHHHHEECCCCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEECC PDKHGICSLGISVEATLAACQMAGKIIAHINPQMPRTHGDGFIHYSKFTAVYEQSMPLPQ CCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCC HPLAASDQTSLAIGKNVAQLVRDGDCLQMGIGAIPDAVLSCLTEHKDLGVHTELFSDGVL CCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCHHH NLVELGVITNRFKKVHPGKTVTGFALGSQRLYDFVDDNPSVIFMDIEQVNDTAIIRKNPN HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCC VMAINSALQVDISGQICADSLGTRIYSGVGGQMDFIRGAGLSEGGRSVIALPSTAARGSV EEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCHH SRIATVLSPGAGVVTTRAHVHYIVTEFGIANLRGKSLRERARALIDIAHPDFRELLCRET HHHHHHHCCCCCEEEEHHHEEEEEECCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHH FDMWGLTV HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]