Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622338

Identifier: 167622338

GI number: 167622338

Start: 465927

End: 467195

Strand: Direct

Name: 167622338

Synonym: Shal_0398

Alternate gene names: NA

Gene position: 465927-467195 (Clockwise)

Preceding gene: 167622336

Following gene: 167622339

Centisome position: 8.91

GC content: 49.25

Gene sequence:

>1269_bases
ATGAAAAAACTCATTATCAACGCCAATGTTTTTAACGGCACAGACAATCAACTCATAGAGAATGTTGCAGTGCTGATTGA
AGATAACCTGATCAGTAAAATTAGTCGCCAAGATGACATCGATTTGTCGATTGCCGATGAAGTGATTGACGCTAAAGGTG
GCACCGTGATGCCGGGTCTAATGGACGCACACGTTCATATTACCTTGTCGGCCCCTTTTAATGTGATCGACACCATGACC
CGTGAAGAGGTGGCGATTCGCTCAGCGCGTATTTCGGAAGAGATGTTGATGCGTGGATTTACCACCATTCGTGATGTTGC
TGGTAACACCCTCGGCCTTAAAAATAGTATCGACAAAGGTTACGCCAAGGGGCCACGCATTCTGCCATCAATGGCAGCGG
TTTCTCAAACCAGCGGCCATTCCGATTACCGTCAAAATCAGGCGCAGGAGCGGATCGGCAAACATGAAGACTCGCCTATG
ATGAAGCTTGGCGCAATGAAGGTCGCAGACGGCAGATCAGAAGTATTAAAAGCGGTGCGCGAGCAACTGTTTATGGGCGC
ATCGCAAATTAAGATCATGGCCGGTGGCGGCGCATCATCTACCTTTGACCCACTCGATACGCTGCAGTTTACCCTCGATG
AGATGAAAGCGGCCGTCGAGGCAGCAACGGATTACGGCACTTATGTTGCGGCGCATATCCATACCGCCGACGCAATGCGC
CGAGCCGCAGAGGCGGGAGTGATGTCGTTTGAACATGCCACCATTATGGATGATGACATTGCCCAAACCATTAAAGACAA
AGGCATTTGGGTGATCCCATCCTACTTTACCTCATCACTGATTGCAGAGCGTAAGATCCCGCTACCTAACGAAGAGACCT
ATCGCAAAACTGAGCGGGTAGGTAAGGCGATGCTCAAATCTGCCGAACTGATTAAGAAATATCAGATCGACAATATCGCA
TTTGGTACCGACTGCGTCGGTGAAGCCAGCGTACACGCCACTCAGCTTAATGAGCTAGGTGCGATTGAGCAGACCTTTGA
CACGATAACCGCTTTACGTATGGCGACCTCAAACTGCGGACGCTTATTTGAAATGTCGACCTATCAGCACCCGTATCAGG
AGGGGTGTTTAGGTAAAGTGGTTGAAGGCGCTTATGCTGACCTGCTGATTATTGAGGGTAATCCGCTTGAAGGGGTTGCC
TGCGTTGCCGATACCAATAAGCAAAAGGTGATTATGAAAGACGGCGTCATCTACAAAAACACGCTGTAA

Upstream 100 bases:

>100_bases
TGTCACTAAATGGCCATTTAATTGAGGAGGCTGTTGGTAAGATTTGTTTATCAGTTAGATGACATCATTTTAGTGAAGCA
ATGCTACCGAGGAATCAACG

Downstream 100 bases:

>100_bases
TCGCTATTGTAATCGCTGCTGTAATCGCGACTGCTATCGCAACTTAACGGCCTAATAACGGCGCTTAGTTCACACAACTA
GGCGCCGTTTTGCTATCTGC

Product: amidohydrolase

Products: NA

Alternate protein names: Prolidase; Xaa-Pro Dipeptidase; Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Family; Secreted Hydrolase; Xaa-Pro Dipeptidase Family; M38 Family Peptidase; Aryldialkylphosphatase Related Protein; Parathion Hydrolase; Amidohydrolase Domain Protein; Pro-Hyp Dipeptidase; Metal-Dependent Amidohydrolase; Amidohydrolase Imidazolonepropionase; Aryldialkylphosphatase; Metallo-Dependent Hydrolase; Amidase; Metal-Dependent Hydrolase; Exported Adenine Deaminase-Like Amidohydrolase; Aryldialkylphosphatase-Related Protein; M38 Familypeptidase; Xaa-Arg/Lys Peptidase; Hydrolase; Amidohydrolase Domain-Containing Protein; X-Pro Dipeptidase

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGLMDAHVHITLSAPFNVIDTMT
REEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPM
MKLGAMKVADGRSEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR
RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIA
FGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCGRLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVA
CVADTNKQKVIMKDGVIYKNTL

Sequences:

>Translated_422_residues
MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGLMDAHVHITLSAPFNVIDTMT
REEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPM
MKLGAMKVADGRSEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR
RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIA
FGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCGRLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVA
CVADTNKQKVIMKDGVIYKNTL
>Mature_422_residues
MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGLMDAHVHITLSAPFNVIDTMT
REEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPM
MKLGAMKVADGRSEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR
RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIA
FGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCGRLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVA
CVADTNKQKVIMKDGVIYKNTL

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=344, Percent_Identity=30.8139534883721, Blast_Score=150, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46079; Mature: 46079

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGL
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCEECCCE
MDAHVHITLSAPFNVIDTMTREEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKG
EEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
YAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPMMKLGAMKVADGRSEVLKAVR
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCCHHHHHHHHH
EQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR
HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH
RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERV
HHHHHCCCEECCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GKAMLKSAELIKKYQIDNIAFGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCG
HHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVACVADTNKQKVIMKDGVIYKN
CEEECHHCCCCHHHCHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCEEEEC
TL
CC
>Mature Secondary Structure
MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGL
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCEECCCE
MDAHVHITLSAPFNVIDTMTREEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKG
EEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
YAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPMMKLGAMKVADGRSEVLKAVR
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCCHHHHHHHHH
EQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR
HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH
RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERV
HHHHHCCCEECCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GKAMLKSAELIKKYQIDNIAFGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCG
HHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVACVADTNKQKVIMKDGVIYKN
CEEECHHCCCCHHHCHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCEEEEC
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA