| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622338
Identifier: 167622338
GI number: 167622338
Start: 465927
End: 467195
Strand: Direct
Name: 167622338
Synonym: Shal_0398
Alternate gene names: NA
Gene position: 465927-467195 (Clockwise)
Preceding gene: 167622336
Following gene: 167622339
Centisome position: 8.91
GC content: 49.25
Gene sequence:
>1269_bases ATGAAAAAACTCATTATCAACGCCAATGTTTTTAACGGCACAGACAATCAACTCATAGAGAATGTTGCAGTGCTGATTGA AGATAACCTGATCAGTAAAATTAGTCGCCAAGATGACATCGATTTGTCGATTGCCGATGAAGTGATTGACGCTAAAGGTG GCACCGTGATGCCGGGTCTAATGGACGCACACGTTCATATTACCTTGTCGGCCCCTTTTAATGTGATCGACACCATGACC CGTGAAGAGGTGGCGATTCGCTCAGCGCGTATTTCGGAAGAGATGTTGATGCGTGGATTTACCACCATTCGTGATGTTGC TGGTAACACCCTCGGCCTTAAAAATAGTATCGACAAAGGTTACGCCAAGGGGCCACGCATTCTGCCATCAATGGCAGCGG TTTCTCAAACCAGCGGCCATTCCGATTACCGTCAAAATCAGGCGCAGGAGCGGATCGGCAAACATGAAGACTCGCCTATG ATGAAGCTTGGCGCAATGAAGGTCGCAGACGGCAGATCAGAAGTATTAAAAGCGGTGCGCGAGCAACTGTTTATGGGCGC ATCGCAAATTAAGATCATGGCCGGTGGCGGCGCATCATCTACCTTTGACCCACTCGATACGCTGCAGTTTACCCTCGATG AGATGAAAGCGGCCGTCGAGGCAGCAACGGATTACGGCACTTATGTTGCGGCGCATATCCATACCGCCGACGCAATGCGC CGAGCCGCAGAGGCGGGAGTGATGTCGTTTGAACATGCCACCATTATGGATGATGACATTGCCCAAACCATTAAAGACAA AGGCATTTGGGTGATCCCATCCTACTTTACCTCATCACTGATTGCAGAGCGTAAGATCCCGCTACCTAACGAAGAGACCT ATCGCAAAACTGAGCGGGTAGGTAAGGCGATGCTCAAATCTGCCGAACTGATTAAGAAATATCAGATCGACAATATCGCA TTTGGTACCGACTGCGTCGGTGAAGCCAGCGTACACGCCACTCAGCTTAATGAGCTAGGTGCGATTGAGCAGACCTTTGA CACGATAACCGCTTTACGTATGGCGACCTCAAACTGCGGACGCTTATTTGAAATGTCGACCTATCAGCACCCGTATCAGG AGGGGTGTTTAGGTAAAGTGGTTGAAGGCGCTTATGCTGACCTGCTGATTATTGAGGGTAATCCGCTTGAAGGGGTTGCC TGCGTTGCCGATACCAATAAGCAAAAGGTGATTATGAAAGACGGCGTCATCTACAAAAACACGCTGTAA
Upstream 100 bases:
>100_bases TGTCACTAAATGGCCATTTAATTGAGGAGGCTGTTGGTAAGATTTGTTTATCAGTTAGATGACATCATTTTAGTGAAGCA ATGCTACCGAGGAATCAACG
Downstream 100 bases:
>100_bases TCGCTATTGTAATCGCTGCTGTAATCGCGACTGCTATCGCAACTTAACGGCCTAATAACGGCGCTTAGTTCACACAACTA GGCGCCGTTTTGCTATCTGC
Product: amidohydrolase
Products: NA
Alternate protein names: Prolidase; Xaa-Pro Dipeptidase; Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Family; Secreted Hydrolase; Xaa-Pro Dipeptidase Family; M38 Family Peptidase; Aryldialkylphosphatase Related Protein; Parathion Hydrolase; Amidohydrolase Domain Protein; Pro-Hyp Dipeptidase; Metal-Dependent Amidohydrolase; Amidohydrolase Imidazolonepropionase; Aryldialkylphosphatase; Metallo-Dependent Hydrolase; Amidase; Metal-Dependent Hydrolase; Exported Adenine Deaminase-Like Amidohydrolase; Aryldialkylphosphatase-Related Protein; M38 Familypeptidase; Xaa-Arg/Lys Peptidase; Hydrolase; Amidohydrolase Domain-Containing Protein; X-Pro Dipeptidase
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGLMDAHVHITLSAPFNVIDTMT REEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPM MKLGAMKVADGRSEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIA FGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCGRLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVA CVADTNKQKVIMKDGVIYKNTL
Sequences:
>Translated_422_residues MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGLMDAHVHITLSAPFNVIDTMT REEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPM MKLGAMKVADGRSEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIA FGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCGRLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVA CVADTNKQKVIMKDGVIYKNTL >Mature_422_residues MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGLMDAHVHITLSAPFNVIDTMT REEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPM MKLGAMKVADGRSEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIA FGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCGRLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVA CVADTNKQKVIMKDGVIYKNTL
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=344, Percent_Identity=30.8139534883721, Blast_Score=150, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46079; Mature: 46079
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGL CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCEECCCE MDAHVHITLSAPFNVIDTMTREEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKG EEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC YAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPMMKLGAMKVADGRSEVLKAVR CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCCHHHHHHHHH EQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERV HHHHHCCCEECCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH GKAMLKSAELIKKYQIDNIAFGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCG HHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVACVADTNKQKVIMKDGVIYKN CEEECHHCCCCHHHCHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCEEEEC TL CC >Mature Secondary Structure MKKLIINANVFNGTDNQLIENVAVLIEDNLISKISRQDDIDLSIADEVIDAKGGTVMPGL CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCEECCCE MDAHVHITLSAPFNVIDTMTREEVAIRSARISEEMLMRGFTTIRDVAGNTLGLKNSIDKG EEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC YAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGKHEDSPMMKLGAMKVADGRSEVLKAVR CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCCHHHHHHHHH EQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEAATDYGTYVAAHIHTADAMR HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH RAAEAGVMSFEHATIMDDDIAQTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERV HHHHHCCCEECCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH GKAMLKSAELIKKYQIDNIAFGTDCVGEASVHATQLNELGAIEQTFDTITALRMATSNCG HHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLFEMSTYQHPYQEGCLGKVVEGAYADLLIIEGNPLEGVACVADTNKQKVIMKDGVIYKN CEEECHHCCCCHHHCHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCEEEEC TL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA