Click here to switch to the map view.

The map label for this gene is cbl [C]

Identifier: 167622240

GI number: 167622240

Start: 359276

End: 360241

Strand: Reverse

Name: cbl [C]

Synonym: Shal_0299

Alternate gene names: 167622240

Gene position: 360241-359276 (Counterclockwise)

Preceding gene: 167622246

Following gene: 167622238

Centisome position: 6.89

GC content: 38.61

Gene sequence:

>966_bases
ATGAGAGATATAAGTTTTAGTGACTTGGATTTATTAAGCATTAATATACTAGTTAATCTTTATGAGCATAAATCTGCTAC
TTTTGTCTCTCATAAATTGAATGTTCCTGCACCAAAGATAAGTCGCTGTCTTAAACACGCAAGGGAAGTTTTTGGTAATG
AACTTTTCATTCGTAAAAAGCACGGCTTAGTACCCAATGAATTTGCAGCTAAAGTCTACCCTATTGCGAAAGAGATCATT
GAGTGCTCTAAAAATTTACAGAAGCTAAATGGTATACATGAACTAAGCCCGACTCATCATTTCGAAATTGTGGCTCCCGA
TCTAATCTCATATCCGTTTCCTAAAGTACTGCTTAACGCCATCAAGAATGCGGGTAAAGAGGTGAGCTTCAACATTGCCC
CTTGGACTAAGAGTTCAATCAACGACATTATCAATGGCGAGGTCGATCTCGGCTTATGTTGTAGTAAGATGCTAGATAGC
ATTAAAGATACCGATGACTCGCTTAATGCCATACCACTGAAGAAGTTAAACAAAGTCTTCTTGGTTTGCCATCATGAGCA
TCCAATCTTAAAAGAAGAGATCACCTTAGAATCCATTGCAGGATATCCATTTATTAATAGTAACATGGGCCAATCAGAAC
TGGAGCAGAGTCCTTTCCAAGAATTTTGTCAATCACAGCAAATTAAGCTCATCACTGAGATGAACTTAACCGGGTTAACC
GGGCTATTTGAATACCTGCGTTCTAGCCAAGGTATCGCATTGTTACCTTACAGCTCTATATTCACAATGATTAATAACAC
TCCAGATCTGCATGCTTGCCGCTTATCTGACGTAGAATCTGAACGCCTATATATGCATGTGAAAGAACCATACCTTTATT
TGGTTTATAGCGACAGCAACAAAGACCCAAACTTACGCTGGCTCTCTTCAGAGGTAAAAGAGTTAGTGGAGCTATTGTTA
CATTAA

Upstream 100 bases:

>100_bases
AAAAACTTTATTTAAAAATCAGCAAAATAAAATTAGTATAAAAAATTCAAATTGGTTATTATCGAATTCAACATTTAACT
TTCATTAACAGGTATTTAAT

Downstream 100 bases:

>100_bases
CGAATAGCCTGCCGACTAAAATAAAAAAGAGTGCCTAAGCACTCTTTTTTATAGCTAATAATGTAAACTAATTTGCCATA
CTCTGCTGCTCATACTGCTC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator-Like Protein; Transcriptional Regulator; Regulatory Protein LysR; Transcriptional Regulator LysR Family; Transcriptional Regulator LysR Family Protein; HTH-Type Transcriptional Regulator YidZ

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRDISFSDLDLLSINILVNLYEHKSATFVSHKLNVPAPKISRCLKHAREVFGNELFIRKKHGLVPNEFAAKVYPIAKEII
ECSKNLQKLNGIHELSPTHHFEIVAPDLISYPFPKVLLNAIKNAGKEVSFNIAPWTKSSINDIINGEVDLGLCCSKMLDS
IKDTDDSLNAIPLKKLNKVFLVCHHEHPILKEEITLESIAGYPFINSNMGQSELEQSPFQEFCQSQQIKLITEMNLTGLT
GLFEYLRSSQGIALLPYSSIFTMINNTPDLHACRLSDVESERLYMHVKEPYLYLVYSDSNKDPNLRWLSSEVKELVELLL
H

Sequences:

>Translated_321_residues
MRDISFSDLDLLSINILVNLYEHKSATFVSHKLNVPAPKISRCLKHAREVFGNELFIRKKHGLVPNEFAAKVYPIAKEII
ECSKNLQKLNGIHELSPTHHFEIVAPDLISYPFPKVLLNAIKNAGKEVSFNIAPWTKSSINDIINGEVDLGLCCSKMLDS
IKDTDDSLNAIPLKKLNKVFLVCHHEHPILKEEITLESIAGYPFINSNMGQSELEQSPFQEFCQSQQIKLITEMNLTGLT
GLFEYLRSSQGIALLPYSSIFTMINNTPDLHACRLSDVESERLYMHVKEPYLYLVYSDSNKDPNLRWLSSEVKELVELLL
H
>Mature_321_residues
MRDISFSDLDLLSINILVNLYEHKSATFVSHKLNVPAPKISRCLKHAREVFGNELFIRKKHGLVPNEFAAKVYPIAKEII
ECSKNLQKLNGIHELSPTHHFEIVAPDLISYPFPKVLLNAIKNAGKEVSFNIAPWTKSSINDIINGEVDLGLCCSKMLDS
IKDTDDSLNAIPLKKLNKVFLVCHHEHPILKEEITLESIAGYPFINSNMGQSELEQSPFQEFCQSQQIKLITEMNLTGLT
GLFEYLRSSQGIALLPYSSIFTMINNTPDLHACRLSDVESERLYMHVKEPYLYLVYSDSNKDPNLRWLSSEVKELVELLL
H

Specific function: May Be An Accessory Regulatory Protein Within The Cys Regulon. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36465; Mature: 36465

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDISFSDLDLLSINILVNLYEHKSATFVSHKLNVPAPKISRCLKHAREVFGNELFIRKK
CCCCCCCCHHHEEHHHHEEHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC
HGLVPNEFAAKVYPIAKEIIECSKNLQKLNGIHELSPTHHFEIVAPDLISYPFPKVLLNA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCHHHHCCCHHHHHHH
IKNAGKEVSFNIAPWTKSSINDIINGEVDLGLCCSKMLDSIKDTDDSLNAIPLKKLNKVF
HHCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEE
LVCHHEHPILKEEITLESIAGYPFINSNMGQSELEQSPFQEFCQSQQIKLITEMNLTGLT
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCCCEEEEEECCCHHHH
GLFEYLRSSQGIALLPYSSIFTMINNTPDLHACRLSDVESERLYMHVKEPYLYLVYSDSN
HHHHHHHCCCCEEEEEHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCEEEEEEECCC
KDPNLRWLSSEVKELVELLLH
CCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDISFSDLDLLSINILVNLYEHKSATFVSHKLNVPAPKISRCLKHAREVFGNELFIRKK
CCCCCCCCHHHEEHHHHEEHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC
HGLVPNEFAAKVYPIAKEIIECSKNLQKLNGIHELSPTHHFEIVAPDLISYPFPKVLLNA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCHHHHCCCHHHHHHH
IKNAGKEVSFNIAPWTKSSINDIINGEVDLGLCCSKMLDSIKDTDDSLNAIPLKKLNKVF
HHCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEE
LVCHHEHPILKEEITLESIAGYPFINSNMGQSELEQSPFQEFCQSQQIKLITEMNLTGLT
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCCCEEEEEECCCHHHH
GLFEYLRSSQGIALLPYSSIFTMINNTPDLHACRLSDVESERLYMHVKEPYLYLVYSDSN
HHHHHHHCCCCEEEEEHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEECCEEEEEEECCC
KDPNLRWLSSEVKELVELLLH
CCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA