| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yhhL [C]
Identifier: 167622226
GI number: 167622226
Start: 342009
End: 342293
Strand: Reverse
Name: yhhL [C]
Synonym: Shal_0285
Alternate gene names: 167622226
Gene position: 342293-342009 (Counterclockwise)
Preceding gene: 167622227
Following gene: 167622224
Centisome position: 6.55
GC content: 40.35
Gene sequence:
>285_bases ATGAAAGCTATGCTAGTTCTAGGTAAAATTGTTACCGCATTCGCTTGGTTAATGATGCTATATAATTTAGTTTCGCCTTT TGCAGGCAATATTGCGGTGATCCTCAACATCCTGTTTGCAATGACTATTTTTATGCACTGCTTTCAGACGCTTATCTTCC ACACTATGTTTAAGCCCCTGCTGCCACTGAAAAAATCAGATTACCTGCAGGTATTCCTTTTCGGCGTATTCAGCCTACTG CAATATCGCAAGCAGGTAATGGATAAGCAGGTTCAAAACGGTTAA
Upstream 100 bases:
>100_bases TAAAGAGAAAAAGGCTGGCCAAGTGATCTACCGTTTATATCAATATTCAGCCGAGTCTGCGCTCGATGAAACGACATGTG ACACCGAGGAAACCAATTAA
Downstream 100 bases:
>100_bases AGACCGGACAAGCCAAGACAGTACTAAAACGAAAAAGCAAAGACGAGCGCTTCGCTTACGAAAAAGCTGCAATGACACCA GATTGCAGCTTTTTTAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPLLPLKKSDYLQVFLFGVFSLL QYRKQVMDKQVQNG
Sequences:
>Translated_94_residues MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPLLPLKKSDYLQVFLFGVFSLL QYRKQVMDKQVQNG >Mature_94_residues MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPLLPLKKSDYLQVFLFGVFSLL QYRKQVMDKQVQNG
Specific function: Unknown
COG id: COG3776
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10883; Mature: 10883
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLKKSDYLQVFLFGVFSLLQYRKQVMDKQVQNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLKKSDYLQVFLFGVFSLLQYRKQVMDKQVQNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA