| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622177
Identifier: 167622177
GI number: 167622177
Start: 283096
End: 284886
Strand: Direct
Name: 167622177
Synonym: Shal_0236
Alternate gene names: NA
Gene position: 283096-284886 (Clockwise)
Preceding gene: 167622174
Following gene: 167622178
Centisome position: 5.42
GC content: 43.66
Gene sequence:
>1791_bases ATGAAACGTAATATTTTAACTGCAGCTATTGTTGCTGCATTATTTCAGTCAGTTGTTTCTTTTGAATCAAATGCCGCTGG TTTTAAACCAGCACCTGCAGCGGGCCAACTAGGTGCGGTGCTTGTTAATCCGTATGGTAACTCACCTCTAACTGCGGTAT TAGATTTGGGCAGTAAGCGCCCAACTGATGTGACGGTAACAGTTCATGGTAAGGGCAATAAAGGAGTTGATATTAGTTAC CCTGTGGGTCAGCAAACAATCAATACCCATGACGGTATTCCCTTGTTTGGTTTATATGCTGATCACAGCAACCAAGTGAC AGTGAAATACAACCTAGACGGTAAAAAGGTCAAAGAAGACTATAAGGTGCTAACCGGACCTATCACTAACGAATATATGG ATAACAGAAATATCACTGTTATGCAGGAAGTTCAGGTGAAGAAGGTTGCCAAAGGCTTTGAAAACCGCTTGTATATGGTC AACAGTCATACTTACAACCAGCAAGGTTCAGATCTGCATTGGTCAGGTCAAAAGAGTAAAGATGCAGGTATATTTGAATC TTCGCCAGCCATGGGTTCATTACCATTCGATAACGCCCCTATGACTTATGTCGTTGATACAAATGGTGATATTCGCTGGT GGTTAGATCAGGATGCGGTTTATGACGGTGTAGGAATCGATGTAAACAAGCGTGGATACTTGATGGGACTGCATGATAAT GGTGAAGGCCGTATTACCTTTGTTCAAGGCCAGCAGTACGGCACCTTTGACTTGTTAGGTAACTTTGAACAACGTCGCTT GCCACGTGGATATGTTGACGCCTCCCATGAACATAACATCATGCCAAATGGCCACTCTTTAGTTCGTGCGGCTAAGGCTA ACTATAAAAACCCTCAAGGCGATATCGTTCATACCGTACGAGACCATATTTTACAGATTGACCAACAGGGTAACTTGGTT GATGTGTGGAACCTGAACGAAATTATGGATCCATATCGTGATGCATTGCTTGAAGCCTTAGATATGGGAGCGGTTTGTTT GAACGTCGATATCGATCAGATGGGTCAAACTGCAGAAATGGAAATTGATGCCCCTTATGGCGATATTCCAGGTATTGCCC CCGGTCGTAACTGGGCTCATATCAACTCTATTGAATATGATCCAAAAGATGACTCTATTATCCTTTCTTTCCGTCATCAA GGTGTAGCCAAAGTGACTCGTGATAAGGAAGTGAAGTGGATCTTGGCACCTTATGAAGGTTGGAACAAAGAGCTTTCAAA GAAACTGCTTAAGCCAGTGGATAAGAATGGTAAGCCTATCAAGTGTACCGATAAAGGTGTGTGTGATGGTGACTTCGACT TTACCTATACTCAGCACACGGCATGGCTAAATAACACCACAGGCAATCTGACGGTTCTGGATAATGGTGACGGTCGTGCC CATGAGCAACCAGCCCTACCAACTATGAAGTATACCCGTTTCGTCGAATACAAAATTGACGACGAAAACATGACTGTGCA GCAGACATGGGAATACGGTAAAGATCGTGGTTATGACTGGTACAGCCCGATCACGTCTAACGTGGAGTATATGGAAGATA AGAACACCATGTTTGGTTTCGGTGGTTCGATTCATCTCTATACCCCTGGTGAGCGCACTATCGGCAAAATCAATGAGATC GGTTATGACGATATGAAGGTCAAAGTAGAGATAGACGTGTTGTCTGACAAGGCAAACTCTCCTCACTACCGCGCAATTAT TGTGAACCCTACTAGCCAATTTGGCTTGTAA
Upstream 100 bases:
>100_bases TGATTATTGTGACATCATTCTCAAATAAAGTTGTTCTAGTTAATTATTGTTTTTAGGGTTGATTACAGTGATTACAAAAT AATTATTAATTGGAGAAGTC
Downstream 100 bases:
>100_bases AAAAATGAATTCCGGGCCCGTATGGGCCCGCTAATTTAGGAGGCTCACAATGAAATTATCTAGATCTGTCTTAGCCGTAT TAGTGGGAATTGGCGGTATT
Product: arylsulfotransferase
Products: NA
Alternate protein names: Arylsulfate Sulfotransferase; Outer Membrane Protein; Fructose-Bisphosphate Aldolase; Arylsulfate Sulfotransferase Degenerate; Sulfatase; Arylsulfatase
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MKRNILTAAIVAALFQSVVSFESNAAGFKPAPAAGQLGAVLVNPYGNSPLTAVLDLGSKRPTDVTVTVHGKGNKGVDISY PVGQQTINTHDGIPLFGLYADHSNQVTVKYNLDGKKVKEDYKVLTGPITNEYMDNRNITVMQEVQVKKVAKGFENRLYMV NSHTYNQQGSDLHWSGQKSKDAGIFESSPAMGSLPFDNAPMTYVVDTNGDIRWWLDQDAVYDGVGIDVNKRGYLMGLHDN GEGRITFVQGQQYGTFDLLGNFEQRRLPRGYVDASHEHNIMPNGHSLVRAAKANYKNPQGDIVHTVRDHILQIDQQGNLV DVWNLNEIMDPYRDALLEALDMGAVCLNVDIDQMGQTAEMEIDAPYGDIPGIAPGRNWAHINSIEYDPKDDSIILSFRHQ GVAKVTRDKEVKWILAPYEGWNKELSKKLLKPVDKNGKPIKCTDKGVCDGDFDFTYTQHTAWLNNTTGNLTVLDNGDGRA HEQPALPTMKYTRFVEYKIDDENMTVQQTWEYGKDRGYDWYSPITSNVEYMEDKNTMFGFGGSIHLYTPGERTIGKINEI GYDDMKVKVEIDVLSDKANSPHYRAIIVNPTSQFGL
Sequences:
>Translated_596_residues MKRNILTAAIVAALFQSVVSFESNAAGFKPAPAAGQLGAVLVNPYGNSPLTAVLDLGSKRPTDVTVTVHGKGNKGVDISY PVGQQTINTHDGIPLFGLYADHSNQVTVKYNLDGKKVKEDYKVLTGPITNEYMDNRNITVMQEVQVKKVAKGFENRLYMV NSHTYNQQGSDLHWSGQKSKDAGIFESSPAMGSLPFDNAPMTYVVDTNGDIRWWLDQDAVYDGVGIDVNKRGYLMGLHDN GEGRITFVQGQQYGTFDLLGNFEQRRLPRGYVDASHEHNIMPNGHSLVRAAKANYKNPQGDIVHTVRDHILQIDQQGNLV DVWNLNEIMDPYRDALLEALDMGAVCLNVDIDQMGQTAEMEIDAPYGDIPGIAPGRNWAHINSIEYDPKDDSIILSFRHQ GVAKVTRDKEVKWILAPYEGWNKELSKKLLKPVDKNGKPIKCTDKGVCDGDFDFTYTQHTAWLNNTTGNLTVLDNGDGRA HEQPALPTMKYTRFVEYKIDDENMTVQQTWEYGKDRGYDWYSPITSNVEYMEDKNTMFGFGGSIHLYTPGERTIGKINEI GYDDMKVKVEIDVLSDKANSPHYRAIIVNPTSQFGL >Mature_596_residues MKRNILTAAIVAALFQSVVSFESNAAGFKPAPAAGQLGAVLVNPYGNSPLTAVLDLGSKRPTDVTVTVHGKGNKGVDISY PVGQQTINTHDGIPLFGLYADHSNQVTVKYNLDGKKVKEDYKVLTGPITNEYMDNRNITVMQEVQVKKVAKGFENRLYMV NSHTYNQQGSDLHWSGQKSKDAGIFESSPAMGSLPFDNAPMTYVVDTNGDIRWWLDQDAVYDGVGIDVNKRGYLMGLHDN GEGRITFVQGQQYGTFDLLGNFEQRRLPRGYVDASHEHNIMPNGHSLVRAAKANYKNPQGDIVHTVRDHILQIDQQGNLV DVWNLNEIMDPYRDALLEALDMGAVCLNVDIDQMGQTAEMEIDAPYGDIPGIAPGRNWAHINSIEYDPKDDSIILSFRHQ GVAKVTRDKEVKWILAPYEGWNKELSKKLLKPVDKNGKPIKCTDKGVCDGDFDFTYTQHTAWLNNTTGNLTVLDNGDGRA HEQPALPTMKYTRFVEYKIDDENMTVQQTWEYGKDRGYDWYSPITSNVEYMEDKNTMFGFGGSIHLYTPGERTIGKINEI GYDDMKVKVEIDVLSDKANSPHYRAIIVNPTSQFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66574; Mature: 66574
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNILTAAIVAALFQSVVSFESNAAGFKPAPAAGQLGAVLVNPYGNSPLTAVLDLGSKR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCC PTDVTVTVHGKGNKGVDISYPVGQQTINTHDGIPLFGLYADHSNQVTVKYNLDGKKVKED CCEEEEEEECCCCCCEEEECCCCCCEECCCCCCEEEEEEECCCCEEEEEECCCCHHHCCC YKVLTGPITNEYMDNRNITVMQEVQVKKVAKGFENRLYMVNSHTYNQQGSDLHWSGQKSK CEEEECCCCHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCC DAGIFESSPAMGSLPFDNAPMTYVVDTNGDIRWWLDQDAVYDGVGIDVNKRGYLMGLHDN CCCCEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCEEECCCEEEEEEEEC GEGRITFVQGQQYGTFDLLGNFEQRRLPRGYVDASHEHNIMPNGHSLVRAAKANYKNPQG CCEEEEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC DIVHTVRDHILQIDQQGNLVDVWNLNEIMDPYRDALLEALDMGAVCLNVDIDQMGQTAEM CHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCEEEE EIDAPYGDIPGIAPGRNWAHINSIEYDPKDDSIILSFRHQGVAKVTRDKEVKWILAPYEG EEECCCCCCCCCCCCCCEEEECCEECCCCCCEEEEEEECCCCEECCCCCCEEEEEECCCC WNKELSKKLLKPVDKNGKPIKCTDKGVCDGDFDFTYTQHTAWLNNTTGNLTVLDNGDGRA CCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCC HEQPALPTMKYTRFVEYKIDDENMTVQQTWEYGKDRGYDWYSPITSNVEYMEDKNTMFGF CCCCCCCCEEEEEEEEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEC GGSIHLYTPGERTIGKINEIGYDDMKVKVEIDVLSDKANSPHYRAIIVNPTSQFGL CCEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCHHHCC >Mature Secondary Structure MKRNILTAAIVAALFQSVVSFESNAAGFKPAPAAGQLGAVLVNPYGNSPLTAVLDLGSKR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCC PTDVTVTVHGKGNKGVDISYPVGQQTINTHDGIPLFGLYADHSNQVTVKYNLDGKKVKED CCEEEEEEECCCCCCEEEECCCCCCEECCCCCCEEEEEEECCCCEEEEEECCCCHHHCCC YKVLTGPITNEYMDNRNITVMQEVQVKKVAKGFENRLYMVNSHTYNQQGSDLHWSGQKSK CEEEECCCCHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCC DAGIFESSPAMGSLPFDNAPMTYVVDTNGDIRWWLDQDAVYDGVGIDVNKRGYLMGLHDN CCCCEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCEEECCCEEEEEEEEC GEGRITFVQGQQYGTFDLLGNFEQRRLPRGYVDASHEHNIMPNGHSLVRAAKANYKNPQG CCEEEEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC DIVHTVRDHILQIDQQGNLVDVWNLNEIMDPYRDALLEALDMGAVCLNVDIDQMGQTAEM CHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCEEEE EIDAPYGDIPGIAPGRNWAHINSIEYDPKDDSIILSFRHQGVAKVTRDKEVKWILAPYEG EEECCCCCCCCCCCCCCEEEECCEECCCCCCEEEEEEECCCCEECCCCCCEEEEEECCCC WNKELSKKLLKPVDKNGKPIKCTDKGVCDGDFDFTYTQHTAWLNNTTGNLTVLDNGDGRA CCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCC HEQPALPTMKYTRFVEYKIDDENMTVQQTWEYGKDRGYDWYSPITSNVEYMEDKNTMFGF CCCCCCCCEEEEEEEEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEC GGSIHLYTPGERTIGKINEIGYDDMKVKVEIDVLSDKANSPHYRAIIVNPTSQFGL CCEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA