Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622178

Identifier: 167622178

GI number: 167622178

Start: 284936

End: 285694

Strand: Direct

Name: 167622178

Synonym: Shal_0237

Alternate gene names: NA

Gene position: 284936-285694 (Clockwise)

Preceding gene: 167622177

Following gene: 167622179

Centisome position: 5.45

GC content: 47.04

Gene sequence:

>759_bases
ATGAAATTATCTAGATCTGTCTTAGCCGTATTAGTGGGAATTGGCGGTATTAGTTCGGCGAGTGCTGAAGTGCTATTTCA
GCAAAATAATGTGATTGTTGGCTACGAGTATTTACTCGATGCCGAAGATAAAAACCCCAATCTCTATGATCAAGCCCACC
TCATCCTAGGTCATACCACAATCGCCGACTGGGGAAGCGCCACGGGGTGGTTGCGGTTTGAAAACCCACTGGACAGCTCG
GAAAACCAGCAAGGGAAAGATGCCGGAGCAACAACCAAAGCCTGGTTAAAGCTTGATTATAACCTTGGTGACTCGCCATT
TAACCTTTGGGTGCAGTCATTTACCTGCGCCAATAAACCAGTGGTGGAGCAAAACTTCTATTTAGGTGGCTCCTATGATG
TTGCTATTGGAAAACTCAAAGGCACAGTCGGTGTCGGTATGCAGTATGCGTACGGCAGTTTTTCCCCAACAGGAAAGTCC
TTTAATGGTGCCTCTGGTACTGCTGCGACGATAATGCTGGGCTACCCGCTAACACCGCATTGGTTTGCTAAGGCTTATTA
CGAAGCTCAATTTAACCGAAGTGACGAACATAGGGAGGTATTTGGATTCGACTCATACGGCCATCAGGCTATTGTCGGTG
TGGATTACAGGTTTAATTCTCAGTTCTTCGTTAGCACCCTGTATAAACATAGGCAGAGCTGGGGTGGAGCACTCAATGGT
GGTGGAGAGTTGCTATTCGAAGCGGGGTACAATTTCTAG

Upstream 100 bases:

>100_bases
CCTCACTACCGCGCAATTATTGTGAACCCTACTAGCCAATTTGGCTTGTAAAAAAATGAATTCCGGGCCCGTATGGGCCC
GCTAATTTAGGAGGCTCACA

Downstream 100 bases:

>100_bases
GAGTCAGTGGGATACTTAGTCATAAAGCTTTAGCTATAAACCTTTAGCTATGAATACAGAGTATCCCATATCCCAACTTT
TCAATATATGTGAACACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKLSRSVLAVLVGIGGISSASAEVLFQQNNVIVGYEYLLDAEDKNPNLYDQAHLILGHTTIADWGSATGWLRFENPLDSS
ENQQGKDAGATTKAWLKLDYNLGDSPFNLWVQSFTCANKPVVEQNFYLGGSYDVAIGKLKGTVGVGMQYAYGSFSPTGKS
FNGASGTAATIMLGYPLTPHWFAKAYYEAQFNRSDEHREVFGFDSYGHQAIVGVDYRFNSQFFVSTLYKHRQSWGGALNG
GGELLFEAGYNF

Sequences:

>Translated_252_residues
MKLSRSVLAVLVGIGGISSASAEVLFQQNNVIVGYEYLLDAEDKNPNLYDQAHLILGHTTIADWGSATGWLRFENPLDSS
ENQQGKDAGATTKAWLKLDYNLGDSPFNLWVQSFTCANKPVVEQNFYLGGSYDVAIGKLKGTVGVGMQYAYGSFSPTGKS
FNGASGTAATIMLGYPLTPHWFAKAYYEAQFNRSDEHREVFGFDSYGHQAIVGVDYRFNSQFFVSTLYKHRQSWGGALNG
GGELLFEAGYNF
>Mature_252_residues
MKLSRSVLAVLVGIGGISSASAEVLFQQNNVIVGYEYLLDAEDKNPNLYDQAHLILGHTTIADWGSATGWLRFENPLDSS
ENQQGKDAGATTKAWLKLDYNLGDSPFNLWVQSFTCANKPVVEQNFYLGGSYDVAIGKLKGTVGVGMQYAYGSFSPTGKS
FNGASGTAATIMLGYPLTPHWFAKAYYEAQFNRSDEHREVFGFDSYGHQAIVGVDYRFNSQFFVSTLYKHRQSWGGALNG
GGELLFEAGYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27659; Mature: 27659

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSRSVLAVLVGIGGISSASAEVLFQQNNVIVGYEYLLDAEDKNPNLYDQAHLILGHTT
CCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEE
IADWGSATGWLRFENPLDSSENQQGKDAGATTKAWLKLDYNLGDSPFNLWVQSFTCANKP
ECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHEEEEEECCCCC
VVEQNFYLGGSYDVAIGKLKGTVGVGMQYAYGSFSPTGKSFNGASGTAATIMLGYPLTPH
EECCCEEECCCEEEEEEEECCEEECCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHH
WFAKAYYEAQFNRSDEHREVFGFDSYGHQAIVGVDYRFNSQFFVSTLYKHRQSWGGALNG
HHHHHHHEEECCCCCCCCEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCC
GGELLFEAGYNF
CCEEEEECCCCC
>Mature Secondary Structure
MKLSRSVLAVLVGIGGISSASAEVLFQQNNVIVGYEYLLDAEDKNPNLYDQAHLILGHTT
CCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEE
IADWGSATGWLRFENPLDSSENQQGKDAGATTKAWLKLDYNLGDSPFNLWVQSFTCANKP
ECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHEEEEEECCCCC
VVEQNFYLGGSYDVAIGKLKGTVGVGMQYAYGSFSPTGKSFNGASGTAATIMLGYPLTPH
EECCCEEECCCEEEEEEEECCEEECCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHH
WFAKAYYEAQFNRSDEHREVFGFDSYGHQAIVGVDYRFNSQFFVSTLYKHRQSWGGALNG
HHHHHHHEEECCCCCCCCEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCC
GGELLFEAGYNF
CCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA