| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is aes [H]
Identifier: 167622168
GI number: 167622168
Start: 274046
End: 274984
Strand: Direct
Name: aes [H]
Synonym: Shal_0227
Alternate gene names: 167622168
Gene position: 274046-274984 (Clockwise)
Preceding gene: 167622167
Following gene: 167622169
Centisome position: 5.24
GC content: 49.52
Gene sequence:
>939_bases ATGCCGTTAGATCCAAAAGTCGCACTGTATTTGCAACAAGTGCGTGATTCTGGCGCACAAGCCTATGAAGACATGACCCC CGCAGAGTCTAGACGCCTCGATATGAATGAGCTGACGAAGACGAAAGCCGATCGAGTGTTAGAGCCCGTGGCCGCGATAG AGCATAGCTTTATTCCTGGACCCACTGCAGATCTGCCCATTCGGATCTACCGTCCTAAAGGTGACACGAGTGAGTTACAG CCGGCGATTATCTTTATTCATGGCAGCGGTTGGGTGGTATCGAACATAGAGACCAATGACCATTTTAGCCGTGCCCTCGC TAATCGCACCGGATCGGTAGTGATCGCGATTAATTATCAAAAGGCACCTGAGCACAAGTTTCCCATCCCAATGGATGACT GCTATGCATCGACATTGTGGATCTTTGAGCATGCGACTTTGCTGGGATTAGACTCGAACCGTATCGGCATCTTAGGTGAC AGTGCCGGTGGTAATTTAGCAGCGGCGGTGACGCTAAGGCTGCGTGACGAACAGGGGCCAAAATTGGCTTACCAAGTACT CGTTTATCCAGCGGTGCAATATGGTTGGCAAACGCCATCGGCTATCGCTCATGCAGAAGGTTATCTATTGCAACAGGCCA GTATGAAGTATTACTGGGGCCACTACCTGCGTAGCGAAGCCGACGCACAAAATCCCTATTGTTCACCGCTGAATGCCCTG AGCCACAAAGATCTGCCGCCAACACTTATCTATACCGCAGAGTTTGATCCATTATGCGATGACGGCTATCTCTATGCCCG AGAATTACAAGGCAGTGGTGTTACAGTCAAATACCGCTGTTTTGACGGCGTGATCCATGGGTTTATTAAGATGCTTGGGG TGTTTGATCAGGCCGATGAGTTTCTAGATGAACTTAAGCAAGATCTGTTAGAGATCTAG
Upstream 100 bases:
>100_bases AGCACCTCAGGCAGCACGCTTAATAATTGAAACTATTAATTGAAACTATAGGCAGCTGAACAACCATGGTTGGCAGACTG CAATTGAGAAGGAAAGCGGT
Downstream 100 bases:
>100_bases GTGTGATTAGTTAAAAACATAACTTGGGAATGCTCACGAAACAAACGGTTTCGTGAGCTTGTTCGAAGAATCATCAACTT GTTCCTCTAGAAAAATTAAT
Product: alpha/beta hydrolase domain-containing protein
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPLDPKVALYLQQVRDSGAQAYEDMTPAESRRLDMNELTKTKADRVLEPVAAIEHSFIPGPTADLPIRIYRPKGDTSELQ PAIIFIHGSGWVVSNIETNDHFSRALANRTGSVVIAINYQKAPEHKFPIPMDDCYASTLWIFEHATLLGLDSNRIGILGD SAGGNLAAAVTLRLRDEQGPKLAYQVLVYPAVQYGWQTPSAIAHAEGYLLQQASMKYYWGHYLRSEADAQNPYCSPLNAL SHKDLPPTLIYTAEFDPLCDDGYLYARELQGSGVTVKYRCFDGVIHGFIKMLGVFDQADEFLDELKQDLLEI
Sequences:
>Translated_312_residues MPLDPKVALYLQQVRDSGAQAYEDMTPAESRRLDMNELTKTKADRVLEPVAAIEHSFIPGPTADLPIRIYRPKGDTSELQ PAIIFIHGSGWVVSNIETNDHFSRALANRTGSVVIAINYQKAPEHKFPIPMDDCYASTLWIFEHATLLGLDSNRIGILGD SAGGNLAAAVTLRLRDEQGPKLAYQVLVYPAVQYGWQTPSAIAHAEGYLLQQASMKYYWGHYLRSEADAQNPYCSPLNAL SHKDLPPTLIYTAEFDPLCDDGYLYARELQGSGVTVKYRCFDGVIHGFIKMLGVFDQADEFLDELKQDLLEI >Mature_311_residues PLDPKVALYLQQVRDSGAQAYEDMTPAESRRLDMNELTKTKADRVLEPVAAIEHSFIPGPTADLPIRIYRPKGDTSELQP AIIFIHGSGWVVSNIETNDHFSRALANRTGSVVIAINYQKAPEHKFPIPMDDCYASTLWIFEHATLLGLDSNRIGILGDS AGGNLAAAVTLRLRDEQGPKLAYQVLVYPAVQYGWQTPSAIAHAEGYLLQQASMKYYWGHYLRSEADAQNPYCSPLNALS HKDLPPTLIYTAEFDPLCDDGYLYARELQGSGVTVKYRCFDGVIHGFIKMLGVFDQADEFLDELKQDLLEI
Specific function: Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=195, Percent_Identity=34.8717948717949, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI157041239, Length=138, Percent_Identity=36.231884057971, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI206597554, Length=137, Percent_Identity=37.2262773722628, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI61966717, Length=161, Percent_Identity=31.6770186335404, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI68051721, Length=170, Percent_Identity=30.5882352941176, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI157041237, Length=107, Percent_Identity=37.3831775700935, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI21328446, Length=91, Percent_Identity=37.3626373626374, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI226423947, Length=178, Percent_Identity=29.2134831460674, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1786682, Length=264, Percent_Identity=31.0606060606061, Blast_Score=121, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71996133, Length=308, Percent_Identity=30.1948051948052, Blast_Score=121, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17540028, Length=314, Percent_Identity=26.7515923566879, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17567059, Length=264, Percent_Identity=31.0606060606061, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI72001146, Length=130, Percent_Identity=36.1538461538462, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115533410, Length=137, Percent_Identity=27.7372262773723, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533412, Length=137, Percent_Identity=27.7372262773723, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 34782; Mature: 34651
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDPKVALYLQQVRDSGAQAYEDMTPAESRRLDMNELTKTKADRVLEPVAAIEHSFIPG CCCCCHHHHHHHHHHHCHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PTADLPIRIYRPKGDTSELQPAIIFIHGSGWVVSNIETNDHFSRALANRTGSVVIAINYQ CCCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHCCCCCEEEEEECC KAPEHKFPIPMDDCYASTLWIFEHATLLGLDSNRIGILGDSAGGNLAAAVTLRLRDEQGP CCCCCCCCCCHHHHHHHHHHEEECEEEEECCCCCEEEEECCCCCCEEEEEEEEEECCCCC KLAYQVLVYPAVQYGWQTPSAIAHAEGYLLQQASMKYYWGHYLRSEADAQNPYCSPLNAL CEEEHHEEHHHHHHCCCCCHHHHHHCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHH SHKDLPPTLIYTAEFDPLCDDGYLYARELQGSGVTVKYRCFDGVIHGFIKMLGVFDQADE CCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH FLDELKQDLLEI HHHHHHHHHHCC >Mature Secondary Structure PLDPKVALYLQQVRDSGAQAYEDMTPAESRRLDMNELTKTKADRVLEPVAAIEHSFIPG CCCCHHHHHHHHHHHCHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PTADLPIRIYRPKGDTSELQPAIIFIHGSGWVVSNIETNDHFSRALANRTGSVVIAINYQ CCCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHCCCCCEEEEEECC KAPEHKFPIPMDDCYASTLWIFEHATLLGLDSNRIGILGDSAGGNLAAAVTLRLRDEQGP CCCCCCCCCCHHHHHHHHHHEEECEEEEECCCCCEEEEECCCCCCEEEEEEEEEECCCCC KLAYQVLVYPAVQYGWQTPSAIAHAEGYLLQQASMKYYWGHYLRSEADAQNPYCSPLNAL CEEEHHEEHHHHHHCCCCCHHHHHHCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHH SHKDLPPTLIYTAEFDPLCDDGYLYARELQGSGVTVKYRCFDGVIHGFIKMLGVFDQADE CCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH FLDELKQDLLEI HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA