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The map label for this gene is yfcE [H]

Identifier: 167622140

GI number: 167622140

Start: 237548

End: 238105

Strand: Reverse

Name: yfcE [H]

Synonym: Shal_0199

Alternate gene names: 167622140

Gene position: 238105-237548 (Counterclockwise)

Preceding gene: 167622142

Following gene: 167622136

Centisome position: 4.56

GC content: 49.28

Gene sequence:

>558_bases
ATGAAACTTTTTATCGCCTCCGATCTACACGGATCTCTGTCTGCAACTAAAGCCATGCTCACCCGTTTTGAGCAATCCGG
TGCTCGTTATTTGATTCTGCTCGGAGATCTGCTTAATCACGGCCCACGTAACGCTATCCCAGAGGGATACGACCCCGTTG
CCTTGTCTGAGACACTGAATGCCTATGCAGATAAGATAATTGCTGTTCGTGGCAACTGCGACAGCGAAGTCGATCAGATG
CTACTGCAATTCCCGATTACCGAGACATATGCTCAGATATTGATGCCGCAGATGCGCTTATTCTTAACCCATGGCCATGT
TTATAGTCCTGATAAGCTACCACCACTGCAAGCGGGAGACGGTTTACTCTATGGCCACACCCATATTGCCGTAGCTGAAT
ATCGCGACGATATATTGCTGTTTAATCCTGGCTCAACCACCATTCCGCGCAATGACAGCCGCGCCTCATACGGCTTGATC
ACTGACACCGAATGTCAGATCCGCGCACTCGACAACGATGAGCTTTTGCTAAGCTGTCCAATTCGCCACAGGTTGTAA

Upstream 100 bases:

>100_bases
TGTTTCATCGATTTTTAGCCGTTAAGTTTTATTATTAATAGATTTATCTAAAAACAAGGCTATATTGACGATCTGTTTTA
TCATTCTAGGCATATAGCCC

Downstream 100 bases:

>100_bases
TAGATTCTAGGTCTTAGGAAAAGCTTAAAAAGTAGGTCCTAGGTCCTAGGTGCGAGGTTCTAGGACCTAGGAAAAGCTAA
GACGGAAAGGATTAGAAGAT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKLFIASDLHGSLSATKAMLTRFEQSGARYLILLGDLLNHGPRNAIPEGYDPVALSETLNAYADKIIAVRGNCDSEVDQM
LLQFPITETYAQILMPQMRLFLTHGHVYSPDKLPPLQAGDGLLYGHTHIAVAEYRDDILLFNPGSTTIPRNDSRASYGLI
TDTECQIRALDNDELLLSCPIRHRL

Sequences:

>Translated_185_residues
MKLFIASDLHGSLSATKAMLTRFEQSGARYLILLGDLLNHGPRNAIPEGYDPVALSETLNAYADKIIAVRGNCDSEVDQM
LLQFPITETYAQILMPQMRLFLTHGHVYSPDKLPPLQAGDGLLYGHTHIAVAEYRDDILLFNPGSTTIPRNDSRASYGLI
TDTECQIRALDNDELLLSCPIRHRL
>Mature_185_residues
MKLFIASDLHGSLSATKAMLTRFEQSGARYLILLGDLLNHGPRNAIPEGYDPVALSETLNAYADKIIAVRGNCDSEVDQM
LLQFPITETYAQILMPQMRLFLTHGHVYSPDKLPPLQAGDGLLYGHTHIAVAEYRDDILLFNPGSTTIPRNDSRASYGLI
TDTECQIRALDNDELLLSCPIRHRL

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=182, Percent_Identity=54.9450549450549, Blast_Score=219, Evalue=8e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 20580; Mature: 20580

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFIASDLHGSLSATKAMLTRFEQSGARYLILLGDLLNHGPRNAIPEGYDPVALSETLN
CEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHH
AYADKIIAVRGNCDSEVDQMLLQFPITETYAQILMPQMRLFLTHGHVYSPDKLPPLQAGD
HHHCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
GLLYGHTHIAVAEYRDDILLFNPGSTTIPRNDSRASYGLITDTECQIRALDNDELLLSCP
CEEECCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCEEEECC
IRHRL
HHCCC
>Mature Secondary Structure
MKLFIASDLHGSLSATKAMLTRFEQSGARYLILLGDLLNHGPRNAIPEGYDPVALSETLN
CEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHH
AYADKIIAVRGNCDSEVDQMLLQFPITETYAQILMPQMRLFLTHGHVYSPDKLPPLQAGD
HHHCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
GLLYGHTHIAVAEYRDDILLFNPGSTTIPRNDSRASYGLITDTECQIRALDNDELLLSCP
CEEECCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCEEEECC
IRHRL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]