| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622136
Identifier: 167622136
GI number: 167622136
Start: 230963
End: 231610
Strand: Reverse
Name: 167622136
Synonym: Shal_0195
Alternate gene names: NA
Gene position: 231610-230963 (Counterclockwise)
Preceding gene: 167622140
Following gene: 167622133
Centisome position: 4.43
GC content: 47.07
Gene sequence:
>648_bases ATGGATCTGTATTACCATCCGCTGGCACGCCAGTCACAAAAAACGCTTATTGCTCTCTATGAGAAACAGGCAAGCTTCAA CCCGCACATCATCGACCTTGGCGACGCTTTTAGTAGACGCAGTTTTCAGCAACTTAATGCTGCGTCTAAACTGCCACTGT TACACGTACGAGCTGGAGAGTCATTTAACGACGCCAGCATTATTATCGAATATATAGACAACTATATTAGCTCCGGCACC CAACTTATCCCAATAGACAAGACTCAAGCCCTGTATGTCAGGCTCTATGATAGGTTAAGCGACAACCAACTAGACAGAGA GATTGATGCCTGGTTACAGGCCGTTAGATCCAGCAATAATCAGCTCTACACCAAGCGGTTAGAAAGGGCGATGCTGACTA GCTTAGAACATTTTGATCGCCGCCTAGCCAATAACCACTGGGTTTGTGGCGAAAGCTTTTCCCTCGCCGATTGTGCATTC ATCCCCTGCCTGAAAACACTGGAGAGTCGACTGCAATTGTTAGACTATGAACACATTGGTCGCTACTGGATCCAAGCCAA GTTACGCGGTTCAGTAAACCAAGTGATAGAAGAGATCGAGCTCACCCTCGCCACAACAGGCCAAAATGAGCAGGTAGTGC ACACTTAA
Upstream 100 bases:
>100_bases CTGAATAGCCCAGAGCCCCCACCGTCACTGACATTGAGAGTCCCAGTGTTAACGACTAGAGTTAATAATAACCTTTGCAT TTAACGAACCCTCATCGGCT
Downstream 100 bases:
>100_bases CTCGCCGCTCTAAATTCTATCGGCTCCCCCGTAGGGCTTGGGAGGTTGCACTCTTTCTTAAGCTGCAAAAAACTCTTCCA CTTAATCACCTCTGGCGGCA
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Ta Family; Glutathione S-Transferase Domain
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MDLYYHPLARQSQKTLIALYEKQASFNPHIIDLGDAFSRRSFQQLNAASKLPLLHVRAGESFNDASIIIEYIDNYISSGT QLIPIDKTQALYVRLYDRLSDNQLDREIDAWLQAVRSSNNQLYTKRLERAMLTSLEHFDRRLANNHWVCGESFSLADCAF IPCLKTLESRLQLLDYEHIGRYWIQAKLRGSVNQVIEEIELTLATTGQNEQVVHT
Sequences:
>Translated_215_residues MDLYYHPLARQSQKTLIALYEKQASFNPHIIDLGDAFSRRSFQQLNAASKLPLLHVRAGESFNDASIIIEYIDNYISSGT QLIPIDKTQALYVRLYDRLSDNQLDREIDAWLQAVRSSNNQLYTKRLERAMLTSLEHFDRRLANNHWVCGESFSLADCAF IPCLKTLESRLQLLDYEHIGRYWIQAKLRGSVNQVIEEIELTLATTGQNEQVVHT >Mature_215_residues MDLYYHPLARQSQKTLIALYEKQASFNPHIIDLGDAFSRRSFQQLNAASKLPLLHVRAGESFNDASIIIEYIDNYISSGT QLIPIDKTQALYVRLYDRLSDNQLDREIDAWLQAVRSSNNQLYTKRLERAMLTSLEHFDRRLANNHWVCGESFSLADCAF IPCLKTLESRLQLLDYEHIGRYWIQAKLRGSVNQVIEEIELTLATTGQNEQVVHT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24832; Mature: 24832
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLYYHPLARQSQKTLIALYEKQASFNPHIIDLGDAFSRRSFQQLNAASKLPLLHVRAGE CCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCC SFNDASIIIEYIDNYISSGTQLIPIDKTQALYVRLYDRLSDNQLDREIDAWLQAVRSSNN CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC QLYTKRLERAMLTSLEHFDRRLANNHWVCGESFSLADCAFIPCLKTLESRLQLLDYEHIG HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH RYWIQAKLRGSVNQVIEEIELTLATTGQNEQVVHT HHHHHHHHHCHHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure MDLYYHPLARQSQKTLIALYEKQASFNPHIIDLGDAFSRRSFQQLNAASKLPLLHVRAGE CCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCC SFNDASIIIEYIDNYISSGTQLIPIDKTQALYVRLYDRLSDNQLDREIDAWLQAVRSSNN CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC QLYTKRLERAMLTSLEHFDRRLANNHWVCGESFSLADCAFIPCLKTLESRLQLLDYEHIG HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH RYWIQAKLRGSVNQVIEEIELTLATTGQNEQVVHT HHHHHHHHHCHHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA