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The map label for this gene is narT [H]

Identifier: 167622126

GI number: 167622126

Start: 217811

End: 219286

Strand: Reverse

Name: narT [H]

Synonym: Shal_0185

Alternate gene names: 167622126

Gene position: 219286-217811 (Counterclockwise)

Preceding gene: 167622127

Following gene: 167622125

Centisome position: 4.2

GC content: 47.15

Gene sequence:

>1476_bases
ATGCAAAATAACGGAAGAATGAATCTGCTAAATTTGGCGGATCCTAAAATAAAAATGCTCCACATTACCTGGTTTGCGTT
TTTCCTATCCTTTGTGGTGTGGTTCAGTCACGCCCCCTTGATGGTCTTTATCAAAGAGGCTTTTGACCTAACAAGTGATC
AAGTCAAGGCTTTGCTCATCCTGAACGTGGCATTGACGATTCCGGCGCGGATCATTATCGGTATCCTCGTCGACAAGTTT
GGTCCGCGGATCATTTATAGCAGCCTGTTAATCCTTTCCTCGGGGATCTGTCTCACCTTCGCCACGGCGACCAGCTTTGA
ACAGTTGGCCTTTTTCCGATTTTTACTCGGTTTTGTCGGCGCGGGCTTCGTGATCGGCATCCGTTTAGTGGGTGAATGGT
TTCCAGCAAAACAGGTAGGTATTGCTGAAGGTATCTATGGCGGTTGGGGTAACTTTGGTTCGGCAGCTGCTGCGATGACA
TTACCTACCATAGCCTATGCTTTTGGTGGTGACGACGGATGGCGTTATGCCCTAGGGCTAACGGGTGTCGCAGCAGGACT
CTACGGTATCTTTTTCTACATAATGGCCCGCAATACCCCTAAAGGCTCGACCTACTTTAAACCCAAAAAATCTGGTGGAC
TTGAAGTCACCAGTTGGAAAGACTTCTTTTTCTACCTAGGCATGAATGTGCCAATGTATATCGCACTGGCCGTTTTAGCG
TGGAAGCTATCTCCTGCTGGCGTCAACCTCTATGCAACAGAAACCATGTACATGATGTGGGTGGGTCTTACTGCTTTATT
CTTTATACAGCTCAATTCAATCTGGCGCGTCAATAAGGAAAACCTCACCCACGGTGTCCCTGATATTGATAAGTATGAGT
TTAAACAAGTTGCAATCCTGAACGTCGCCTACTTTGTCACCTTTGGTTCCGAACTTGCCGTAGTATCCATGCTACCACTG
TTCTTCCTAGATACATTCGAAGGTCTGGATCCTGTTAAAGCGGGTCTGTTAGCCTCTGGATTCGCCTTTATGAACCTAGT
TGCTCGCCCCACTGGAGGCTGGCTCAGTGATAAATTTGGTCGCCGCCAATCTTTGATGATTTTCATTGGGGGTCTAACAT
TAGGCTATGCCATGCTGAGTCAGATAGACGGAACCTGGTTTATCCCCTTCGCAGTGATGGCAACTATGGTCTGCTCTTTC
TTCGTTCAAGCAGGTGAAGGAGCAGTATTTGCCATCGTGCCACTGGTTAAACGTCGAATGACAGGTCAAATCGCCGGAAT
GACGGGAGCATACGGCAATGTCGGTGCGGTGATCTATTTAACCGTGTTGTCATTTGTTGATTACAGTACCTTCTTTATGG
TCATCGCCGCTTCGTCAGCCGTGATGTTCTTAGCTGTACTCTTCCTTAGTGAGCCAAAAGGTCATATGGCGGAAGTTAAT
GAAGACGGTACTGTTGAGCTAATTGATGTCGATTAG

Upstream 100 bases:

>100_bases
CACAATTGACGCAGATCAACACACTTTTTCAACACGTGATCAACAATACCGTGCATTACAACTACATAATTTCGCGTATA
AAACCTTCTGGAGTCGACGT

Downstream 100 bases:

>100_bases
TGACAAGCAGACGGCAACCAGTGGTTGTGGTTGCCTAGTCAACAGCATCTCAGGATTGGCTATGACCCATAAAAAAAAGT
CAAATAAGCTTACCATCGAT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MQNNGRMNLLNLADPKIKMLHITWFAFFLSFVVWFSHAPLMVFIKEAFDLTSDQVKALLILNVALTIPARIIIGILVDKF
GPRIIYSSLLILSSGICLTFATATSFEQLAFFRFLLGFVGAGFVIGIRLVGEWFPAKQVGIAEGIYGGWGNFGSAAAAMT
LPTIAYAFGGDDGWRYALGLTGVAAGLYGIFFYIMARNTPKGSTYFKPKKSGGLEVTSWKDFFFYLGMNVPMYIALAVLA
WKLSPAGVNLYATETMYMMWVGLTALFFIQLNSIWRVNKENLTHGVPDIDKYEFKQVAILNVAYFVTFGSELAVVSMLPL
FFLDTFEGLDPVKAGLLASGFAFMNLVARPTGGWLSDKFGRRQSLMIFIGGLTLGYAMLSQIDGTWFIPFAVMATMVCSF
FVQAGEGAVFAIVPLVKRRMTGQIAGMTGAYGNVGAVIYLTVLSFVDYSTFFMVIAASSAVMFLAVLFLSEPKGHMAEVN
EDGTVELIDVD

Sequences:

>Translated_491_residues
MQNNGRMNLLNLADPKIKMLHITWFAFFLSFVVWFSHAPLMVFIKEAFDLTSDQVKALLILNVALTIPARIIIGILVDKF
GPRIIYSSLLILSSGICLTFATATSFEQLAFFRFLLGFVGAGFVIGIRLVGEWFPAKQVGIAEGIYGGWGNFGSAAAAMT
LPTIAYAFGGDDGWRYALGLTGVAAGLYGIFFYIMARNTPKGSTYFKPKKSGGLEVTSWKDFFFYLGMNVPMYIALAVLA
WKLSPAGVNLYATETMYMMWVGLTALFFIQLNSIWRVNKENLTHGVPDIDKYEFKQVAILNVAYFVTFGSELAVVSMLPL
FFLDTFEGLDPVKAGLLASGFAFMNLVARPTGGWLSDKFGRRQSLMIFIGGLTLGYAMLSQIDGTWFIPFAVMATMVCSF
FVQAGEGAVFAIVPLVKRRMTGQIAGMTGAYGNVGAVIYLTVLSFVDYSTFFMVIAASSAVMFLAVLFLSEPKGHMAEVN
EDGTVELIDVD
>Mature_491_residues
MQNNGRMNLLNLADPKIKMLHITWFAFFLSFVVWFSHAPLMVFIKEAFDLTSDQVKALLILNVALTIPARIIIGILVDKF
GPRIIYSSLLILSSGICLTFATATSFEQLAFFRFLLGFVGAGFVIGIRLVGEWFPAKQVGIAEGIYGGWGNFGSAAAAMT
LPTIAYAFGGDDGWRYALGLTGVAAGLYGIFFYIMARNTPKGSTYFKPKKSGGLEVTSWKDFFFYLGMNVPMYIALAVLA
WKLSPAGVNLYATETMYMMWVGLTALFFIQLNSIWRVNKENLTHGVPDIDKYEFKQVAILNVAYFVTFGSELAVVSMLPL
FFLDTFEGLDPVKAGLLASGFAFMNLVARPTGGWLSDKFGRRQSLMIFIGGLTLGYAMLSQIDGTWFIPFAVMATMVCSF
FVQAGEGAVFAIVPLVKRRMTGQIAGMTGAYGNVGAVIYLTVLSFVDYSTFFMVIAASSAVMFLAVLFLSEPKGHMAEVN
EDGTVELIDVD

Specific function: Probably required for nitrate uptake under anoxic conditions. Also possibly involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]

COG id: COG2223

COG function: function code P; Nitrate/nitrite transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 53848; Mature: 53848

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNNGRMNLLNLADPKIKMLHITWFAFFLSFVVWFSHAPLMVFIKEAFDLTSDQVKALLI
CCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH
LNVALTIPARIIIGILVDKFGPRIIYSSLLILSSGICLTFATATSFEQLAFFRFLLGFVG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHC
AGFVIGIRLVGEWFPAKQVGIAEGIYGGWGNFGSAAAAMTLPTIAYAFGGDDGWRYALGL
CHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCEEEEHH
TGVAAGLYGIFFYIMARNTPKGSTYFKPKKSGGLEVTSWKDFFFYLGMNVPMYIALAVLA
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEHHHEEEEECCCCHHHHHHHHHH
WKLSPAGVNLYATETMYMMWVGLTALFFIQLNSIWRVNKENLTHGVPDIDKYEFKQVAIL
HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCCCCHHHHHHHHH
NVAYFVTFGSELAVVSMLPLFFLDTFEGLDPVKAGLLASGFAFMNLVARPTGGWLSDKFG
HHEEEEHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
RRQSLMIFIGGLTLGYAMLSQIDGTWFIPFAVMATMVCSFFVQAGEGAVFAIVPLVKRRM
CCCEEEEEECHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
TGQIAGMTGAYGNVGAVIYLTVLSFVDYSTFFMVIAASSAVMFLAVLFLSEPKGHMAEVN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
EDGTVELIDVD
CCCCEEEEECC
>Mature Secondary Structure
MQNNGRMNLLNLADPKIKMLHITWFAFFLSFVVWFSHAPLMVFIKEAFDLTSDQVKALLI
CCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHH
LNVALTIPARIIIGILVDKFGPRIIYSSLLILSSGICLTFATATSFEQLAFFRFLLGFVG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHC
AGFVIGIRLVGEWFPAKQVGIAEGIYGGWGNFGSAAAAMTLPTIAYAFGGDDGWRYALGL
CHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCEEEEHH
TGVAAGLYGIFFYIMARNTPKGSTYFKPKKSGGLEVTSWKDFFFYLGMNVPMYIALAVLA
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEHHHEEEEECCCCHHHHHHHHHH
WKLSPAGVNLYATETMYMMWVGLTALFFIQLNSIWRVNKENLTHGVPDIDKYEFKQVAIL
HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCCCCHHHHHHHHH
NVAYFVTFGSELAVVSMLPLFFLDTFEGLDPVKAGLLASGFAFMNLVARPTGGWLSDKFG
HHEEEEHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
RRQSLMIFIGGLTLGYAMLSQIDGTWFIPFAVMATMVCSFFVQAGEGAVFAIVPLVKRRM
CCCEEEEEECHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
TGQIAGMTGAYGNVGAVIYLTVLSFVDYSTFFMVIAASSAVMFLAVLFLSEPKGHMAEVN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
EDGTVELIDVD
CCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9082911; 12426351 [H]