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The map label for this gene is narP [H]

Identifier: 167622115

GI number: 167622115

Start: 202530

End: 203171

Strand: Reverse

Name: narP [H]

Synonym: Shal_0174

Alternate gene names: 167622115

Gene position: 203171-202530 (Counterclockwise)

Preceding gene: 167622116

Following gene: 167622113

Centisome position: 3.89

GC content: 46.88

Gene sequence:

>642_bases
ATGCCTATAGCCAAAATACTACTCGTTGATGACCACCCCGCCCTACGCCAAGGACTCGCGCAGCTCATGTCTCTGGAAGA
GAGTCTGGATGTCGTCGCCCAGGCAAGTTCCGGTGAAGAAGCTATCAGTCTCGCCGTTCAATATGAACCCGATATCATAC
TGCTGGATCTCAACATGAGAGGGCTCAGTGGCATAGACACTCTTATCTCACTCAAGAATGCTCAGGTAAAAAGCAAAGTC
ATTATTTTTACCGTCTCAGACAACGAGAGTGACGTAGTGCAAGCCATAAAATTCAATACCGACGGCTATCTGTTAAAAGA
CTCCGAACCTGAAGAACTGATTGAGAAAATTCATCTCGCTCTCCAAGGGGAGTTCGTTATCAGCTCGCCACTGACTCAAA
TTCTTGCACAATCATTAAGAAGCGGCGGCAAAAAAGTTTCCCAACTTGAAGAGCTGACCCAGCGTGAACTGCAGATCGTT
AAGCTCATCGCCTCAGGAAAAAGTAATAAGGAGATCGCCAACAAATTGGGGATCACCGACTCCACGGTGAAAGTGCATGT
CAAAAATCTGCTGAAAAAGCTAACGCTGAAGAGCCGAGTTGAAGTGGTGCTTTGGGCCGTAGAGAATAAGATTAGCCCAT
GA

Upstream 100 bases:

>100_bases
TGAAGGGGCAAATGTACCTAAAAGATCACTTACCTTCGGGCACTATGATTTCAATTACGTTCGAGAATTAGATTACCGGA
TAAAGGATTAGAAAAATAAG

Downstream 100 bases:

>100_bases
GCCACAACTTATTGACTAAGCTAGGTTAGCCCCCCAAGTAAGCTGAAAATAGGCTAAAAAACCCGAGTTTGTCGTCGCTC
TCTACTAGCTTACTCCTCTA

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPIAKILLVDDHPALRQGLAQLMSLEESLDVVAQASSGEEAISLAVQYEPDIILLDLNMRGLSGIDTLISLKNAQVKSKV
IIFTVSDNESDVVQAIKFNTDGYLLKDSEPEELIEKIHLALQGEFVISSPLTQILAQSLRSGGKKVSQLEELTQRELQIV
KLIASGKSNKEIANKLGITDSTVKVHVKNLLKKLTLKSRVEVVLWAVENKISP

Sequences:

>Translated_213_residues
MPIAKILLVDDHPALRQGLAQLMSLEESLDVVAQASSGEEAISLAVQYEPDIILLDLNMRGLSGIDTLISLKNAQVKSKV
IIFTVSDNESDVVQAIKFNTDGYLLKDSEPEELIEKIHLALQGEFVISSPLTQILAQSLRSGGKKVSQLEELTQRELQIV
KLIASGKSNKEIANKLGITDSTVKVHVKNLLKKLTLKSRVEVVLWAVENKISP
>Mature_212_residues
PIAKILLVDDHPALRQGLAQLMSLEESLDVVAQASSGEEAISLAVQYEPDIILLDLNMRGLSGIDTLISLKNAQVKSKVI
IFTVSDNESDVVQAIKFNTDGYLLKDSEPEELIEKIHLALQGEFVISSPLTQILAQSLRSGGKKVSQLEELTQRELQIVK
LIASGKSNKEIANKLGITDSTVKVHVKNLLKKLTLKSRVEVVLWAVENKISP

Specific function: Could activate the expression of a formate dehydrogenase operon and could repress the transcription of the fumarate reductase (frdABCD) operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787473, Length=209, Percent_Identity=50.7177033492823, Blast_Score=174, Evalue=3e-45,
Organism=Escherichia coli, GI1788521, Length=213, Percent_Identity=44.131455399061, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1790102, Length=197, Percent_Identity=35.0253807106599, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788222, Length=207, Percent_Identity=28.0193236714976, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1788712, Length=206, Percent_Identity=25.7281553398058, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=26.5700483091787, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787277, Length=99, Percent_Identity=39.3939393939394, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23345; Mature: 23214

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAKILLVDDHPALRQGLAQLMSLEESLDVVAQASSGEEAISLAVQYEPDIILLDLNMR
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCC
GLSGIDTLISLKNAQVKSKVIIFTVSDNESDVVQAIKFNTDGYLLKDSEPEELIEKIHLA
CCCHHHHHHHHCCCCEECEEEEEEECCCCHHHHEEEEECCCCEEECCCCHHHHHHHHHHH
LQGEFVISSPLTQILAQSLRSGGKKVSQLEELTQRELQIVKLIASGKSNKEIANKLGITD
HCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
STVKVHVKNLLKKLTLKSRVEVVLWAVENKISP
CHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
>Mature Secondary Structure 
PIAKILLVDDHPALRQGLAQLMSLEESLDVVAQASSGEEAISLAVQYEPDIILLDLNMR
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCC
GLSGIDTLISLKNAQVKSKVIIFTVSDNESDVVQAIKFNTDGYLLKDSEPEELIEKIHLA
CCCHHHHHHHHCCCCEECEEEEEEECCCCHHHHEEEEECCCCEEECCCCHHHHHHHHHHH
LQGEFVISSPLTQILAQSLRSGGKKVSQLEELTQRELQIVKLIASGKSNKEIANKLGITD
HCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
STVKVHVKNLLKKLTLKSRVEVVLWAVENKISP
CHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]